Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P06740_001 | Banana | plastid | 85.6 | 85.6 |
| GSMUA_Achr3P23950_001 | Banana | cytosol | 84.58 | 85.28 |
| GSMUA_Achr11P... | Banana | cytosol | 67.34 | 68.45 |
| GSMUA_AchrUn_... | Banana | cytosol | 6.9 | 68.0 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, peroxisome | 24.14 | 61.03 |
| GSMUA_AchrUn_... | Banana | cytosol | 19.07 | 59.87 |
| GSMUA_AchrUn_... | Banana | cytosol | 16.02 | 48.77 |
Protein Annotations
| MapMan:18.4.5.1.4 | Gene3D:2.60.40.10 | MapMan:27.3.1.4 | Gene3D:3.10.580.10 | InterPro:AMPK1_CBM | InterPro:CBS_dom |
| EnsemblPlantsGene:GSMUA_Achr2G01600_001 | EnsemblPlants:GSMUA_Achr2P01600_001 | EnsemblPlants:GSMUA_Achr2T01600_001 | InterPro:IPR000644 | InterPro:IPR013783 | InterPro:Ig-like_fold |
| InterPro:Ig_E-set | UniProt:M0S4A1 | PFAM:PF00571 | PFAM:PF16561 | PFscan:PS51371 | PANTHER:PTHR13780 |
| PANTHER:PTHR13780:SF92 | SMART:SM00116 | SUPFAM:SSF54631 | SUPFAM:SSF81296 | UniParc:UPI000296DAD7 | SEG:seg |
Description
CBS domain containing membrane protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G01600_001]
Coordinates
chr2:-:7461754..7471459
Molecular Weight (calculated)
54346.4 Da
IEP (calculated)
6.653
GRAVY (calculated)
-0.047
Length
493 amino acids
Sequence
(BLAST)
(BLAST)
001: MFAPGTEVSQ EAAGVAGAML VPTRFVWPYG GRRVFLTGSF TRWSEYLPMS PVEGCPRVFQ VICSLAPGLH QYKFYVDGEW KHDESQPSVT GNYGIVNTIY
101: LTREPNPLPP LLSPRTPNSR MSMDVDNEAF QHVVAVSDGT VQDAAIRISE ADIKISRHRI SGFLSAHTAY DLLPESGKVV ALDVNLPVKQ AFHILYEQGI
201: SVAPLWDSLS GRFVGVLSAL DFILILRELG NHGSNLTEEE LETHTISAWK EGKHQIYRQL DEHGRPVQGC IIHAGPYDSL KDVALKILQN KVSTVPIIHS
301: TDQDGSFPQL LHLASLSGIL QCICRHFRHS SSSLPILQQP ICKIPLGTWV PRIGDQSGRP LAMLRPNASL SLALSLLVQA EVSSIPIVDD NDSLVDTYSR
401: SDITALAKDR IYAQIHLDEI SIHQALQLGQ DANSPNGFFN GQRCQMCLRT DPLQKVMEKL ANPGVRRVII VEAGSKRVEG IISLSDVIRF LLG
101: LTREPNPLPP LLSPRTPNSR MSMDVDNEAF QHVVAVSDGT VQDAAIRISE ADIKISRHRI SGFLSAHTAY DLLPESGKVV ALDVNLPVKQ AFHILYEQGI
201: SVAPLWDSLS GRFVGVLSAL DFILILRELG NHGSNLTEEE LETHTISAWK EGKHQIYRQL DEHGRPVQGC IIHAGPYDSL KDVALKILQN KVSTVPIIHS
301: TDQDGSFPQL LHLASLSGIL QCICRHFRHS SSSLPILQQP ICKIPLGTWV PRIGDQSGRP LAMLRPNASL SLALSLLVQA EVSSIPIVDD NDSLVDTYSR
401: SDITALAKDR IYAQIHLDEI SIHQALQLGQ DANSPNGFFN GQRCQMCLRT DPLQKVMEKL ANPGVRRVII VEAGSKRVEG IISLSDVIRF LLG
001: MFGSTLDSSR GNSAASGQLL TPTRFVWPYG GRRVFLSGSF TRWTEHVPMS PLEGCPTVFQ VICNLTPGYH QYKFFVDGEW RHDEHQPFVS GNGGVVNTIF
101: ITGPDMVPAG FSPETLGRSN MDVDDVFLRT ADPSQEAVPR MSGVDLELSR HRISVLLSTR TAYELLPESG KVIALDVNLP VKQAFHILYE QGIPLAPLWD
201: FGKGQFVGVL GPLDFILILR ELGTHGSNLT EEELETHTIA AWKEGKAHIS RQYDGSGRPY PRPLVQVGPY DNLKDVALKI LQNKVAAVPV IYSSLQDGSY
301: PQLLHLASLS GILKCICRYF RHSSSSLPIL QQPICSIPLG TWVPRIGESS SKPLATLRPH ASLGSALALL VQAEVSSIPV VDDNDSLIDI YSRSDITALA
401: KDKAYAQIHL DDMTVHQALQ LGQDASPPYG IFNGQRCHMC LRSDSLVKVM ERLANPGVRR LVIVEAGSKR VEGIISLSDV FQFLLGL
101: ITGPDMVPAG FSPETLGRSN MDVDDVFLRT ADPSQEAVPR MSGVDLELSR HRISVLLSTR TAYELLPESG KVIALDVNLP VKQAFHILYE QGIPLAPLWD
201: FGKGQFVGVL GPLDFILILR ELGTHGSNLT EEELETHTIA AWKEGKAHIS RQYDGSGRPY PRPLVQVGPY DNLKDVALKI LQNKVAAVPV IYSSLQDGSY
301: PQLLHLASLS GILKCICRYF RHSSSSLPIL QQPICSIPLG TWVPRIGESS SKPLATLRPH ASLGSALALL VQAEVSSIPV VDDNDSLIDI YSRSDITALA
401: KDKAYAQIHL DDMTVHQALQ LGQDASPPYG IFNGQRCHMC LRSDSLVKVM ERLANPGVRR LVIVEAGSKR VEGIISLSDV FQFLLGL
Arabidopsis Description
SNF4Sucrose nonfermenting 4-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q944A6]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.