Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P23950_001 | Banana | cytosol | 84.99 | 85.69 |
| GSMUA_Achr2P01600_001 | Banana | cytosol | 85.6 | 85.6 |
| GSMUA_AchrUn_... | Banana | cytosol | 6.9 | 68.0 |
| GSMUA_Achr11P... | Banana | cytosol | 66.33 | 67.42 |
| GSMUA_AchrUn_... | Banana | cytosol | 18.86 | 59.24 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, peroxisome | 22.72 | 57.44 |
| GSMUA_AchrUn_... | Banana | cytosol | 17.04 | 51.85 |
Protein Annotations
| MapMan:18.4.5.1.4 | Gene3D:2.60.40.10 | MapMan:27.3.1.4 | Gene3D:3.10.580.10 | InterPro:AMPK1_CBM | InterPro:CBS_dom |
| EnsemblPlantsGene:GSMUA_Achr8G06740_001 | EnsemblPlants:GSMUA_Achr8P06740_001 | EnsemblPlants:GSMUA_Achr8T06740_001 | InterPro:IPR000644 | InterPro:IPR013783 | InterPro:Ig-like_fold |
| InterPro:Ig_E-set | UniProt:M0TN77 | PFAM:PF00571 | PFAM:PF16561 | PFscan:PS51371 | PANTHER:PTHR13780 |
| PANTHER:PTHR13780:SF92 | SMART:SM00116 | SUPFAM:SSF54631 | SUPFAM:SSF81296 | UniParc:UPI0002961E05 | SEG:seg |
Description
CBS domain containing membrane protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G06740_001]
Coordinates
chr8:+:4383378..4393281
Molecular Weight (calculated)
54496.6 Da
IEP (calculated)
6.824
GRAVY (calculated)
-0.035
Length
493 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSSGTEFLQ EVAGVSGSAL VPTRFVWPYG GRRVFLTGSF TRWSEHLPMS PVEGCPTVFQ AICSLTPGLH QYKFFVDGEW RHDECQPFVT GNDGIVNTIY
101: LTREPNPVPA LSSPGTPNSR MSMDIDHEAF QHVVAVSDGT MQDTALRISE ADIKISRHHI STFLSAHTAY DLLPNSGKVI ALDVNLPVKQ AFHILYEQGI
201: PVAPLWDSIR GRFVGVLSAL DFILILQELG NRGSNLTEEE LEIHTISAWK EGKHQTYGQL DEHGRPLRRR IVHAGPYDSL KDVALKILHN KVSTVPIIRS
301: SAQDGSFPQL LHLASLSEIL RCICRHFKHS SSSLPILLQP ICKFPLGTWL PRIGDQSGRP ITMLRANASL SLALSLLVQA EVSAIPIVDE NDSLVDTYSR
401: SDITALAKDT VYAKMHLDEM SIHQALQLGQ DANSPYGIFN GQRCQMCLPS DPLQKVIERL ANPGVRRVII VEAGSKRVEG IISLGDVFRF LLG
101: LTREPNPVPA LSSPGTPNSR MSMDIDHEAF QHVVAVSDGT MQDTALRISE ADIKISRHHI STFLSAHTAY DLLPNSGKVI ALDVNLPVKQ AFHILYEQGI
201: PVAPLWDSIR GRFVGVLSAL DFILILQELG NRGSNLTEEE LEIHTISAWK EGKHQTYGQL DEHGRPLRRR IVHAGPYDSL KDVALKILHN KVSTVPIIRS
301: SAQDGSFPQL LHLASLSEIL RCICRHFKHS SSSLPILLQP ICKFPLGTWL PRIGDQSGRP ITMLRANASL SLALSLLVQA EVSAIPIVDE NDSLVDTYSR
401: SDITALAKDT VYAKMHLDEM SIHQALQLGQ DANSPYGIFN GQRCQMCLPS DPLQKVIERL ANPGVRRVII VEAGSKRVEG IISLGDVFRF LLG
001: MFGSTLDSSR GNSAASGQLL TPTRFVWPYG GRRVFLSGSF TRWTEHVPMS PLEGCPTVFQ VICNLTPGYH QYKFFVDGEW RHDEHQPFVS GNGGVVNTIF
101: ITGPDMVPAG FSPETLGRSN MDVDDVFLRT ADPSQEAVPR MSGVDLELSR HRISVLLSTR TAYELLPESG KVIALDVNLP VKQAFHILYE QGIPLAPLWD
201: FGKGQFVGVL GPLDFILILR ELGTHGSNLT EEELETHTIA AWKEGKAHIS RQYDGSGRPY PRPLVQVGPY DNLKDVALKI LQNKVAAVPV IYSSLQDGSY
301: PQLLHLASLS GILKCICRYF RHSSSSLPIL QQPICSIPLG TWVPRIGESS SKPLATLRPH ASLGSALALL VQAEVSSIPV VDDNDSLIDI YSRSDITALA
401: KDKAYAQIHL DDMTVHQALQ LGQDASPPYG IFNGQRCHMC LRSDSLVKVM ERLANPGVRR LVIVEAGSKR VEGIISLSDV FQFLLGL
101: ITGPDMVPAG FSPETLGRSN MDVDDVFLRT ADPSQEAVPR MSGVDLELSR HRISVLLSTR TAYELLPESG KVIALDVNLP VKQAFHILYE QGIPLAPLWD
201: FGKGQFVGVL GPLDFILILR ELGTHGSNLT EEELETHTIA AWKEGKAHIS RQYDGSGRPY PRPLVQVGPY DNLKDVALKI LQNKVAAVPV IYSSLQDGSY
301: PQLLHLASLS GILKCICRYF RHSSSSLPIL QQPICSIPLG TWVPRIGESS SKPLATLRPH ASLGSALALL VQAEVSSIPV VDDNDSLIDI YSRSDITALA
401: KDKAYAQIHL DDMTVHQALQ LGQDASPPYG IFNGQRCHMC LRSDSLVKVM ERLANPGVRR LVIVEAGSKR VEGIISLSDV FQFLLGL
Arabidopsis Description
SNF4Sucrose nonfermenting 4-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q944A6]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.