Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P06740_001 | Banana | plastid | 85.69 | 84.99 |
| GSMUA_Achr2P01600_001 | Banana | cytosol | 85.28 | 84.58 |
| GSMUA_AchrUn_... | Banana | cytosol | 6.95 | 68.0 |
| GSMUA_Achr11P... | Banana | cytosol | 66.05 | 66.6 |
| GSMUA_AchrUn_... | Banana | cytosol | 18.4 | 57.32 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, peroxisome | 22.7 | 56.92 |
| GSMUA_AchrUn_... | Banana | cytosol | 16.16 | 48.77 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P23950_001 | EnsemblPlants:GSMUA_Achr3T23950_001 | EnsemblPlantsGene:GSMUA_Achr3G23950_001 | Gene3D:2.60.40.10 | Gene3D:3.10.580.10 | InterPro:AMPK1_CBM |
| InterPro:CBS_dom | InterPro:IPR000644 | InterPro:IPR013783 | InterPro:Ig-like_fold | InterPro:Ig_E-set | PANTHER:PTHR13780 |
| PANTHER:PTHR13780:SF92 | PFAM:PF00571 | PFAM:PF16561 | PFscan:PS51371 | SMART:SM00116 | SUPFAM:SSF54631 |
| SUPFAM:SSF81296 | UniParc:UPI0002960374 | UniProt:M0SHB1 | MapMan:18.4.5.1.4 | MapMan:27.3.1.4 | : |
Description
CBS domain containing membrane protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G23950_001]
Coordinates
chr3:-:24632858..24647229
Molecular Weight (calculated)
54091.0 Da
IEP (calculated)
6.885
GRAVY (calculated)
-0.096
Length
489 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSRGTEFSH DPATVLVPTR FVWPYGGRRV FLSGSFTGWS EHLPMSPVEG CPTVFQVICS LTPGLHQYKF YVDGEWRHDE RQPFATGNYG IVNTIYITRE
101: PNPPPALLSP GTPNSRMSMD VDPETFQHVG AASDGTVQDA ALRISEADIK ISRQRVSTFL SAHTAYDLLP DSGKVVALDV NLPVKQAFHI LHEQGVSVAP
201: LWDSIRGQFV GVISALDFIL ILRELGNRGS NLTEEELETH TISAWKDGKH QMYGQLDEHG RQLQRHIIHA GPYDSLKDVA LKILQNKVST VPIVHSMAHD
301: GSFPQLLHLA SLSGILRCIC RHFRHSSSSL PILQQPICRI PLGTWVPRVG DQSGRPIVVL KPNASLGLVL SLLVQAEVSS IPIVDENESL VDTYSRSDIT
401: TLAKDTAYAQ IHLDEMSIHQ ALQLGQDANS PYGIFNGQRC QMCLRSDPLH KVMERLANPG VRRVIIVEAG SKRVEGIISL GDVFRFLLG
101: PNPPPALLSP GTPNSRMSMD VDPETFQHVG AASDGTVQDA ALRISEADIK ISRQRVSTFL SAHTAYDLLP DSGKVVALDV NLPVKQAFHI LHEQGVSVAP
201: LWDSIRGQFV GVISALDFIL ILRELGNRGS NLTEEELETH TISAWKDGKH QMYGQLDEHG RQLQRHIIHA GPYDSLKDVA LKILQNKVST VPIVHSMAHD
301: GSFPQLLHLA SLSGILRCIC RHFRHSSSSL PILQQPICRI PLGTWVPRVG DQSGRPIVVL KPNASLGLVL SLLVQAEVSS IPIVDENESL VDTYSRSDIT
401: TLAKDTAYAQ IHLDEMSIHQ ALQLGQDANS PYGIFNGQRC QMCLRSDPLH KVMERLANPG VRRVIIVEAG SKRVEGIISL GDVFRFLLG
001: MFGSTLDSSR GNSAASGQLL TPTRFVWPYG GRRVFLSGSF TRWTEHVPMS PLEGCPTVFQ VICNLTPGYH QYKFFVDGEW RHDEHQPFVS GNGGVVNTIF
101: ITGPDMVPAG FSPETLGRSN MDVDDVFLRT ADPSQEAVPR MSGVDLELSR HRISVLLSTR TAYELLPESG KVIALDVNLP VKQAFHILYE QGIPLAPLWD
201: FGKGQFVGVL GPLDFILILR ELGTHGSNLT EEELETHTIA AWKEGKAHIS RQYDGSGRPY PRPLVQVGPY DNLKDVALKI LQNKVAAVPV IYSSLQDGSY
301: PQLLHLASLS GILKCICRYF RHSSSSLPIL QQPICSIPLG TWVPRIGESS SKPLATLRPH ASLGSALALL VQAEVSSIPV VDDNDSLIDI YSRSDITALA
401: KDKAYAQIHL DDMTVHQALQ LGQDASPPYG IFNGQRCHMC LRSDSLVKVM ERLANPGVRR LVIVEAGSKR VEGIISLSDV FQFLLGL
101: ITGPDMVPAG FSPETLGRSN MDVDDVFLRT ADPSQEAVPR MSGVDLELSR HRISVLLSTR TAYELLPESG KVIALDVNLP VKQAFHILYE QGIPLAPLWD
201: FGKGQFVGVL GPLDFILILR ELGTHGSNLT EEELETHTIA AWKEGKAHIS RQYDGSGRPY PRPLVQVGPY DNLKDVALKI LQNKVAAVPV IYSSLQDGSY
301: PQLLHLASLS GILKCICRYF RHSSSSLPIL QQPICSIPLG TWVPRIGESS SKPLATLRPH ASLGSALALL VQAEVSSIPV VDDNDSLIDI YSRSDITALA
401: KDKAYAQIHL DDMTVHQALQ LGQDASPPYG IFNGQRCHMC LRSDSLVKVM ERLANPGVRR LVIVEAGSKR VEGIISLSDV FQFLLGL
Arabidopsis Description
SNF4Sucrose nonfermenting 4-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q944A6]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.