Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0031g01500.t01 | Wine grape | plastid | 49.77 | 42.74 |
| Solyc05g051770.2.1 | Tomato | plastid | 43.66 | 37.8 |
| PGSC0003DMT400077375 | Potato | plastid | 43.66 | 37.8 |
| Bra009067.1-P | Field mustard | plastid | 43.19 | 37.25 |
| CDY21621 | Canola | plastid | 43.19 | 37.25 |
| CDX69870 | Canola | plastid | 43.19 | 37.25 |
| KRH53790 | Soybean | plastid | 41.78 | 37.24 |
| AT5G09995.2 | Thale cress | plastid | 44.6 | 36.97 |
| KRH64155 | Soybean | plastid | 23.94 | 33.77 |
| HORVU7Hr1G037780.9 | Barley | plastid | 28.64 | 25.96 |
| TraesCS7A01G184400.1 | Wheat | plastid | 27.7 | 25.21 |
| TraesCS7D01G185800.1 | Wheat | plastid | 27.23 | 24.37 |
| TraesCS7A01G184100.1 | Wheat | plastid | 27.23 | 24.07 |
| OQU87759 | Sorghum | plastid | 27.23 | 22.39 |
| GSMUA_Achr4P16060_001 | Banana | plastid | 28.64 | 22.34 |
| Os06t0225400-02 | Rice | plastid | 24.88 | 21.63 |
| TraesCS7B01G089100.1 | Wheat | cytosol | 9.86 | 18.42 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P19990_001 | EnsemblPlants:GSMUA_Achr3T19990_001 | EnsemblPlantsGene:GSMUA_Achr3G19990_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR33825 | PANTHER:PTHR33825:SF5 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002968840 | UniProt:M0SG65 |
| MapMan:35.2 | : | : | : | : | : |
Description
Putative uncharacterized protein (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr3G19990_001]
Coordinates
chr3:-:21210090..21211738
Molecular Weight (calculated)
22957.6 Da
IEP (calculated)
8.341
GRAVY (calculated)
-0.024
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLLSASFAT VRCRHLPPSS CAASDQSTLL NNISSGRIVR KSQKEQAIGN ESSPFGPRLP FSSVAFRPLP AAVSYSAADS PSLSAAVVSP PCPSLSRWNL
101: DRRHILLLNF TACATAISAA WLFLSAIPAL LAFKKAAESL EKLLDVTAEE LPDTMAAVRL SGMEISDLTM ELRDLGQEIS QGVRSSTRAV RVAEDRLRRL
201: TTMTPMGENQ PEQ
101: DRRHILLLNF TACATAISAA WLFLSAIPAL LAFKKAAESL EKLLDVTAEE LPDTMAAVRL SGMEISDLTM ELRDLGQEIS QGVRSSTRAV RVAEDRLRRL
201: TTMTPMGENQ PEQ
001: MLFSPSKLQS PQSLISWNPI LHNGFIDKNL SFRRRVTLRL ASPISRLTKG SDSIASSTPS ALYSNPQEPS ISSQLTSSVG QPPLQLSQWT FTQKHFVLLN
101: VVACVTAISA SWLFFAAIPT LLAFKKAAES LEKLLDVTRE ELPDTMAAVR LSGMEISDLT MELSDLGQGI TQGVKSSTRA IRVAEDRLRR LTNMNPGGDA
201: SNQDR
101: VVACVTAISA SWLFFAAIPT LLAFKKAAES LEKLLDVTRE ELPDTMAAVR LSGMEISDLT MELSDLGQGI TQGVKSSTRA IRVAEDRLRR LTNMNPGGDA
201: SNQDR
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Euk /.../s - 9610 (source: NCBI BLink). [Source:TAIR;Acc:AT5G09995]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.