Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G185800.1 | Wheat | plastid | 97.37 | 46.64 |
| TraesCS7A01G184100.1 | Wheat | plastid | 93.86 | 44.4 |
| HORVU7Hr1G037780.9 | Barley | plastid | 88.6 | 42.98 |
| Os06t0225400-02 | Rice | plastid | 64.04 | 29.8 |
| OQU87759 | Sorghum | plastid | 60.53 | 26.64 |
| VIT_07s0031g01500.t01 | Wine grape | plastid | 26.32 | 12.1 |
| KRH53790 | Soybean | plastid | 24.56 | 11.72 |
| PGSC0003DMT400077375 | Potato | plastid | 24.56 | 11.38 |
| Solyc05g051770.2.1 | Tomato | plastid | 23.68 | 10.98 |
| Bra009067.1-P | Field mustard | plastid | 21.93 | 10.12 |
| CDX69870 | Canola | plastid | 21.93 | 10.12 |
| CDY21621 | Canola | plastid | 21.93 | 10.12 |
| GSMUA_Achr3P19990_001 | Banana | plastid | 18.42 | 9.86 |
| AT5G09995.2 | Thale cress | plastid | 21.05 | 9.34 |
| TraesCS2B01G195700.2 | Wheat | mitochondrion, plastid | 8.77 | 5.24 |
| KRH64155 | Soybean | plastid | 1.75 | 1.32 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G089100.1 | EnsemblPlantsGene:TraesCS7B01G089100 | PANTHER:PTHR33825 | PANTHER:PTHR33825:SF3 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr7B:-:103980296..103981143
Molecular Weight (calculated)
12238.6 Da
IEP (calculated)
11.275
GRAVY (calculated)
-0.082
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MASVRLVAKE IGALSVDLSD LSQELTKVVR SSLSIVHTAD AQLRQLATSA QQGTAQGAAN RKKAVGEPLV ATTVREVREL IADIRSGFGA AFGIANLFRW
101: ASKFWSKRPT NNSQ
101: ASKFWSKRPT NNSQ
001: MLFSPSKLQS PQSLISWNPI LHNGFIDKNL SFRRRVTLRL ASPISRLTKG SDSIASSTPS ALYSNPQEPS ISSQLTSSVG QPPLQLSQWT FTQKHFVLLN
101: VVACVTAISA SWLFFAAIPT LLAFKKAAES LEKLLDVTRE ELPDTMAAVR LSGMEISDLT MELSDLGQGI TQGVKSSTRA IRVAEDRLRR LTNMNPASMQ
201: EVMRQTKTDE TEPMLAKQAR SFREGVVKGR SLWQLFSTIT RFSKITTSYL AKRAKQ
101: VVACVTAISA SWLFFAAIPT LLAFKKAAES LEKLLDVTRE ELPDTMAAVR LSGMEISDLT MELSDLGQGI TQGVKSSTRA IRVAEDRLRR LTNMNPASMQ
201: EVMRQTKTDE TEPMLAKQAR SFREGVVKGR SLWQLFSTIT RFSKITTSYL AKRAKQ
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Euk /.../s - 9610 (source: NCBI BLink). [Source:TAIR;Acc:AT5G09995]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.