Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69870 | Canola | plastid | 96.76 | 96.76 |
| AT5G09995.2 | Thale cress | plastid | 70.45 | 67.7 |
| VIT_07s0031g01500.t01 | Wine grape | plastid | 55.47 | 55.24 |
| Solyc05g051770.2.1 | Tomato | plastid | 53.44 | 53.66 |
| PGSC0003DMT400077375 | Potato | plastid | 51.82 | 52.03 |
| KRH53790 | Soybean | plastid | 49.39 | 51.05 |
| GSMUA_Achr3P19990_001 | Banana | plastid | 37.25 | 43.19 |
| KRH64155 | Soybean | plastid | 23.08 | 37.75 |
| Bra018618.1-P | Field mustard | endoplasmic reticulum, extracellular | 24.7 | 37.65 |
| HORVU7Hr1G037780.9 | Barley | plastid | 27.53 | 28.94 |
| TraesCS7D01G185800.1 | Wheat | plastid | 25.51 | 26.47 |
| TraesCS7A01G184100.1 | Wheat | plastid | 25.51 | 26.14 |
| TraesCS7A01G184400.1 | Wheat | plastid | 24.29 | 25.64 |
| Os06t0225400-02 | Rice | plastid | 23.89 | 24.08 |
| OQU87759 | Sorghum | plastid | 24.7 | 23.55 |
| TraesCS7B01G089100.1 | Wheat | cytosol | 10.12 | 21.93 |
Protein Annotations
| EnsemblPlants:Bra009067.1 | EnsemblPlants:Bra009067.1-P | EnsemblPlantsGene:Bra009067 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR33825 | PANTHER:PTHR33825:SF5 | TMHMM:TMhelix | UniParc:UPI000254489C | UniProt:M4CXX0 | MapMan:35.2 |
Description
AT5G09995 (E=2e-097) | unknown protein
Coordinates
chrA10:+:15108092..15109201
Molecular Weight (calculated)
27452.5 Da
IEP (calculated)
10.960
GRAVY (calculated)
-0.118
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSSTKLQPP KPAIFVNPII QQPFIGKSPP FRRRYTLRQA SLRFAKVSDS IASPLYSNPN ESSGLTSSVG QPPLQLSQWT LTQKHFVLLN VVACVTAISA
101: SWLFLAAIPT LLAFKKAAES VEKLLDVTRE ELPDTMAALR LSGMEISDLT MELSDLGQGI TQGVKSSTRA IRVAEDRLRR FTNMNPVASM QEVMHQTERK
201: ETEPVVAKAA RNLREGIVKG RSLLQLFFTI TRFSKTAASY FAKRVKQ
101: SWLFLAAIPT LLAFKKAAES VEKLLDVTRE ELPDTMAALR LSGMEISDLT MELSDLGQGI TQGVKSSTRA IRVAEDRLRR FTNMNPVASM QEVMHQTERK
201: ETEPVVAKAA RNLREGIVKG RSLLQLFFTI TRFSKTAASY FAKRVKQ
001: MLFSPSKLQS PQSLISWNPI LHNGFIDKNL SFRRRVTLRL ASPISRLTKG SDSIASSTPS ALYSNPQEPS ISSQLTSSVG QPPLQLSQWT FTQKHFVLLN
101: VVACVTAISA SWLFFAAIPT LLAFKKAAES LEKLLDVTRE ELPDTMAAVR LSGMEISDLT MELSDLGQGI TQGVKSSTRA IRVAEDRLRR LTNMNPVASM
201: QEVMRQTKTD ETEPMLAKQA RSFREGVVKG RSLWQLFSTI TRFSKITTSY LAKRAKQ
101: VVACVTAISA SWLFFAAIPT LLAFKKAAES LEKLLDVTRE ELPDTMAAVR LSGMEISDLT MELSDLGQGI TQGVKSSTRA IRVAEDRLRR LTNMNPVASM
201: QEVMRQTKTD ETEPMLAKQA RSFREGVVKG RSLWQLFSTI TRFSKITTSY LAKRAKQ
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Euk /.../s - 9610 (source: NCBI BLink). [Source:TAIR;Acc:AT5G09995]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.