Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009067.1-P | Field mustard | plastid | 67.7 | 70.45 |
| CDX69870 | Canola | plastid | 67.32 | 70.04 |
| CDY21621 | Canola | plastid | 67.32 | 70.04 |
| VIT_07s0031g01500.t01 | Wine grape | plastid | 52.14 | 54.03 |
| Solyc05g051770.2.1 | Tomato | plastid | 50.58 | 52.85 |
| PGSC0003DMT400077375 | Potato | plastid | 49.03 | 51.22 |
| KRH53790 | Soybean | plastid | 44.75 | 48.12 |
| GSMUA_Achr3P19990_001 | Banana | plastid | 36.97 | 44.6 |
| KRH64155 | Soybean | plastid | 21.79 | 37.09 |
| HORVU7Hr1G037780.9 | Barley | plastid | 27.24 | 29.79 |
| TraesCS7A01G184100.1 | Wheat | plastid | 26.46 | 28.22 |
| TraesCS7A01G184400.1 | Wheat | plastid | 24.51 | 26.92 |
| TraesCS7D01G185800.1 | Wheat | plastid | 24.9 | 26.89 |
| AT1G08530.1 | Thale cress | plastid | 26.85 | 26.85 |
| Os06t0225400-02 | Rice | plastid | 23.35 | 24.49 |
| OQU87759 | Sorghum | plastid | 23.74 | 23.55 |
| TraesCS7B01G089100.1 | Wheat | cytosol | 9.34 | 21.05 |
Protein Annotations
| MapMan:35.2 | EntrezGene:830861 | ProteinID:AED91477.1 | ArrayExpress:AT5G09995 | EnsemblPlantsGene:AT5G09995 | RefSeq:AT5G09995 |
| TAIR:AT5G09995 | RefSeq:AT5G09995-TAIR-G | EnsemblPlants:AT5G09995.2 | TAIR:AT5G09995.2 | Unigene:At.32428 | ncoils:Coil |
| UniProt:F4KFF0 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_974759.1 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PANTHER:PTHR33825 | PANTHER:PTHR33825:SF11 | TMHMM:TMhelix | UniParc:UPI000034F355 | : | : |
Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Euk /.../s - 9610 (source: NCBI BLink). [Source:TAIR;Acc:AT5G09995]
Coordinates
chr5:-:3125077..3126378
Molecular Weight (calculated)
28581.6 Da
IEP (calculated)
10.904
GRAVY (calculated)
-0.163
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MLFSPSKLQS PQSLISWNPI LHNGFIDKNL SFRRRVTLRL ASPISRLTKG SDSIASSTPS ALYSNPQEPS ISSQLTSSVG QPPLQLSQWT FTQKHFVLLN
101: VVACVTAISA SWLFFAAIPT LLAFKKAAES LEKLLDVTRE ELPDTMAAVR LSGMEISDLT MELSDLGQGI TQGVKSSTRA IRVAEDRLRR LTNMNPVASM
201: QEVMRQTKTD ETEPMLAKQA RSFREGVVKG RSLWQLFSTI TRFSKITTSY LAKRAKQ
101: VVACVTAISA SWLFFAAIPT LLAFKKAAES LEKLLDVTRE ELPDTMAAVR LSGMEISDLT MELSDLGQGI TQGVKSSTRA IRVAEDRLRR LTNMNPVASM
201: QEVMRQTKTD ETEPMLAKQA RSFREGVVKG RSLWQLFSTI TRFSKITTSY LAKRAKQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.