Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018618.1-P | Field mustard | endoplasmic reticulum, extracellular | 52.14 | 82.72 |
| CDX95053 | Canola | mitochondrion, plastid | 57.2 | 58.8 |
| CDX93556 | Canola | mitochondrion, plastid | 53.7 | 55.2 |
| Os12t0430900-00 | Rice | cytosol | 24.9 | 53.78 |
| VIT_04s0043g00870.t01 | Wine grape | plastid | 52.53 | 53.15 |
| KRH29303 | Soybean | plastid | 50.19 | 50.59 |
| Solyc04g051120.2.1 | Tomato | plastid | 52.92 | 49.63 |
| GSMUA_Achr4P16060_001 | Banana | plastid | 51.36 | 48.35 |
| PGSC0003DMT400059517 | Potato | plastid | 31.52 | 43.55 |
| TraesCS2D01G176900.1 | Wheat | mitochondrion, plastid | 31.52 | 36.65 |
| TraesCS2A01G169400.2 | Wheat | mitochondrion, plastid | 30.74 | 35.43 |
| TraesCS2B01G195700.2 | Wheat | mitochondrion, plastid | 24.51 | 32.98 |
| AT5G09995.2 | Thale cress | plastid | 26.85 | 26.85 |
| KXG23152 | Sorghum | plastid | 29.57 | 26.57 |
Protein Annotations
| MapMan:35.2 | EntrezGene:837375 | ProteinID:AEE28302.1 | EMBL:AK229523 | ArrayExpress:AT1G08530 | EnsemblPlantsGene:AT1G08530 |
| RefSeq:AT1G08530 | TAIR:AT1G08530 | RefSeq:AT1G08530-TAIR-G | EnsemblPlants:AT1G08530.1 | TAIR:AT1G08530.1 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0009536 | GO:GO:0009941 |
| GO:GO:0016020 | GO:GO:0016021 | RefSeq:NP_172329.2 | PO:PO:0000293 | PANTHER:PTHR33825 | PANTHER:PTHR33825:SF11 |
| UniProt:Q0WNC2 | TMHMM:TMhelix | UniParc:UPI0000196BAF | SEG:seg | : | : |
Description
Chitinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WNC2]
Coordinates
chr1:+:2700981..2703162
Molecular Weight (calculated)
27016.7 Da
IEP (calculated)
8.074
GRAVY (calculated)
0.189
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSLCFISTA PLIRSPPFLD LSPTSLNRFT LKIPASLYVS HPTRCSISNP SSSEELLNSN GGMSRASISV FGGTSLNNLK MQVGSPISLH SINPLAKLSL
101: SDQAFLLLAF IVCTTSVAFT SLVITAIPTL VAMGRAATSF AKLADTARKE LPSTLAAVRL SGMEISDLTL ELSDLSQDIT DGINKSAKAV QAAEAGIKQI
201: GTLAQQQTLS MIEERANLPE ISLQPVVAGA AEKTSHAIGS ATKRLMNIIT GGNKDED
101: SDQAFLLLAF IVCTTSVAFT SLVITAIPTL VAMGRAATSF AKLADTARKE LPSTLAAVRL SGMEISDLTL ELSDLSQDIT DGINKSAKAV QAAEAGIKQI
201: GTLAQQQTLS MIEERANLPE ISLQPVVAGA AEKTSHAIGS ATKRLMNIIT GGNKDED
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.