Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0430900-00 | Rice | cytosol | 25.52 | 61.34 |
| Bra018618.1-P | Field mustard | endoplasmic reticulum, extracellular | 26.22 | 46.3 |
| TraesCS2A01G169400.2 | Wheat | mitochondrion, plastid | 36.01 | 46.19 |
| TraesCS2D01G176900.1 | Wheat | mitochondrion, plastid | 35.66 | 46.15 |
| TraesCS2B01G195700.2 | Wheat | mitochondrion, plastid | 29.37 | 43.98 |
| GSMUA_Achr4P16060_001 | Banana | plastid | 33.57 | 35.16 |
| VIT_04s0043g00870.t01 | Wine grape | plastid | 31.12 | 35.04 |
| KRH29303 | Soybean | plastid | 30.77 | 34.51 |
| CDX93556 | Canola | mitochondrion, plastid | 29.37 | 33.6 |
| CDX95053 | Canola | mitochondrion, plastid | 29.02 | 33.2 |
| Solyc04g051120.2.1 | Tomato | plastid | 31.12 | 32.48 |
| PGSC0003DMT400059517 | Potato | plastid | 20.63 | 31.72 |
| AT1G08530.1 | Thale cress | plastid | 26.57 | 29.57 |
| OQU87759 | Sorghum | plastid | 20.63 | 22.78 |
Protein Annotations
| EnsemblPlants:KXG23152 | EnsemblPlantsGene:SORBI_3008G063200 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR33825 |
| ProteinID:KXG23152 | ProteinID:KXG23152.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI00081ADA42 | UniProt:A0A1B6PBT1 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:6802253..6805519
Molecular Weight (calculated)
30124.8 Da
IEP (calculated)
7.057
GRAVY (calculated)
-0.235
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGHHQHHHR LHASPSPGLL HHISLPIRSL HRTRPPTASF RTHLPRPPQS LPSPFPKKRS DHEAAADFGE LGGAVADDTT EAAAEQLEYG DGVYTPSVGA
101: AGLPALLRAG RAGPAGDPVF FLLTAVAVTT SVAFSSMVAV AIPTMLTNVY TSGCEILSTP NQLLGEKPHE ASPQVAMRRA ANSFTMLADA ALEELPSTMA
201: AIRLSGMEVT DLTLGLSDLS HEIADGVNKS AKVAQAVEAG MGQMQDIAMS MIKERASLQT IPTAGPDNRS HKSSGQQGRR ERGANT
101: AGLPALLRAG RAGPAGDPVF FLLTAVAVTT SVAFSSMVAV AIPTMLTNVY TSGCEILSTP NQLLGEKPHE ASPQVAMRRA ANSFTMLADA ALEELPSTMA
201: AIRLSGMEVT DLTLGLSDLS HEIADGVNKS AKVAQAVEAG MGQMQDIAMS MIKERASLQT IPTAGPDNRS HKSSGQQGRR ERGANT
001: MKSLCFISTA PLIRSPPFLD LSPTSLNRFT LKIPASLYVS HPTRCSISNP SSSEELLNSN GGMSRASISV FGGTSLNNLK MQVGSPISLH SINPLAKLSL
101: SDQAFLLLAF IVCTTSVAFT SLVITAIPTL VAMGRAATSF AKLADTARKE LPSTLAAVRL SGMEISDLTL ELSDLSQDIT DGINKSAKAV QAAEAGIKQI
201: GTLAQQQTLS MIEERANLPE ISLQPVVAGA AEKTSHAIGS ATKRLMNIIT GGNKDED
101: SDQAFLLLAF IVCTTSVAFT SLVITAIPTL VAMGRAATSF AKLADTARKE LPSTLAAVRL SGMEISDLTL ELSDLSQDIT DGINKSAKAV QAAEAGIKQI
201: GTLAQQQTLS MIEERANLPE ISLQPVVAGA AEKTSHAIGS ATKRLMNIIT GGNKDED
Arabidopsis Description
Chitinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WNC2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.