Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018618.1-P | Field mustard | endoplasmic reticulum, extracellular | 63.2 | 97.53 |
| CDX93556 | Canola | mitochondrion, plastid | 78.4 | 78.4 |
| AT1G08530.1 | Thale cress | plastid | 58.8 | 57.2 |
| KRH29303 | Soybean | plastid | 52.8 | 51.76 |
| Os12t0430900-00 | Rice | cytosol | 24.0 | 50.42 |
| VIT_04s0043g00870.t01 | Wine grape | plastid | 50.8 | 50.0 |
| Solyc04g051120.2.1 | Tomato | plastid | 50.4 | 45.99 |
| GSMUA_Achr4P16060_001 | Banana | plastid | 48.4 | 44.32 |
| PGSC0003DMT400059517 | Potato | plastid | 28.0 | 37.63 |
| TraesCS2A01G169400.2 | Wheat | mitochondrion, plastid | 31.6 | 35.43 |
| TraesCS2D01G176900.1 | Wheat | mitochondrion, plastid | 30.8 | 34.84 |
| TraesCS2B01G195700.2 | Wheat | mitochondrion, plastid | 24.4 | 31.94 |
| KXG23152 | Sorghum | plastid | 33.2 | 29.02 |
| CDX69870 | Canola | plastid | 26.4 | 26.72 |
| CDY21621 | Canola | plastid | 26.4 | 26.72 |
Protein Annotations
| EnsemblPlants:CDX95053 | EnsemblPlantsGene:GSBRNA2T00100573001 | GO:A0A078E6T5 | PANTHER:PTHR33825 | PANTHER:PTHR33825:SF11 | ProteinID:CDX95053 |
| ProteinID:CDX95053.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EEB063 | MapMan:35.2 | : |
Description
BnaC05g06180D
Coordinates
chrLK031886:-:892475..894077
Molecular Weight (calculated)
26193.6 Da
IEP (calculated)
10.393
GRAVY (calculated)
0.074
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSLRLISTA PSIPSLSRTR VIFKVAAKRC GGGFATMSLN ANPEKSSSSS HGRASISVLE DQSISSFKMK LGSSVSSPPR LINPLAKTMS RSDQAFLLLA
101: FIACTTSVAF TSFVLTAVPT LLAMGRAASS FAKLADTARQ ELPSTLAAIR LSGMEISDLT LELSELSHEV TDGVNKSAKA VQAAEAGIRQ IGTLAHQQTL
201: SMIDERASLP EISLQPVVAG AAKKTSHAIG RASKTLMNII TGGDKDEDSS
101: FIACTTSVAF TSFVLTAVPT LLAMGRAASS FAKLADTARQ ELPSTLAAIR LSGMEISDLT LELSELSHEV TDGVNKSAKA VQAAEAGIRQ IGTLAHQQTL
201: SMIDERASLP EISLQPVVAG AAKKTSHAIG RASKTLMNII TGGDKDEDSS
001: MKSLCFISTA PLIRSPPFLD LSPTSLNRFT LKIPASLYVS HPTRCSISNP SSSEELLNSN GGMSRASISV FGGTSLNNLK MQVGSPISLH SINPLAKLSL
101: SDQAFLLLAF IVCTTSVAFT SLVITAIPTL VAMGRAATSF AKLADTARKE LPSTLAAVRL SGMEISDLTL ELSDLSQDIT DGINKSAKAV QAAEAGIKQI
201: GTLAQQQTLS MIEERANLPE ISLQPVVAGA AEKTSHAIGS ATKRLMNIIT GGNKDED
101: SDQAFLLLAF IVCTTSVAFT SLVITAIPTL VAMGRAATSF AKLADTARKE LPSTLAAVRL SGMEISDLTL ELSDLSQDIT DGINKSAKAV QAAEAGIKQI
201: GTLAQQQTLS MIEERANLPE ISLQPVVAGA AEKTSHAIGS ATKRLMNIIT GGNKDED
Arabidopsis Description
Chitinase-like protein [Source:UniProtKB/TrEMBL;Acc:Q0WNC2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.