CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plasma membrane, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009067.1-P	Field mustard	plastid	96.76	96.76
CDY21621	Canola	plastid	93.52	93.52
AT5G09995.2	Thale cress	plastid	70.04	67.32
VIT_07s0031g01500.t01	Wine grape	plastid	55.06	54.84
Solyc05g051770.2.1	Tomato	plastid	53.04	53.25
PGSC0003DMT400077375	Potato	plastid	51.42	51.63
KRH53790	Soybean	plastid	48.58	50.21
GSMUA_Achr3P19990_001	Banana	plastid	37.25	43.19
KRH64155	Soybean	plastid	23.08	37.75
HORVU7Hr1G037780.9	Barley	plastid	27.53	28.94
CDX93556	Canola	mitochondrion, plastid	29.15	28.8
TraesCS7D01G185800.1	Wheat	plastid	25.51	26.47
CDX95053	Canola	mitochondrion, plastid	26.72	26.4
TraesCS7A01G184100.1	Wheat	plastid	25.51	26.14
TraesCS7A01G184400.1	Wheat	plastid	23.89	25.21
Os06t0225400-02	Rice	plastid	23.89	24.08
OQU87759	Sorghum	plastid	24.7	23.55
TraesCS7B01G089100.1	Wheat	cytosol	10.12	21.93

Protein Annotations

EnsemblPlants:CDX69870	EnsemblPlantsGene:GSBRNA2T00135936001	GO:A0A078BYN1	PANTHER:PTHR33825	PANTHER:PTHR33825:SF11	ProteinID:CDX69870
ProteinID:CDX69870.1	TMHMM:TMhelix	UniParc:UPI0004EE8496	MapMan:35.2	:	:

Description

BnaA10g22190D

Coordinates

chrLK031790:+:2183669..2184915

Molecular Weight (calculated)

27595.6 Da

IEP (calculated)

10.906

GRAVY (calculated)

-0.169

Length

247 amino acids

Sequence
(BLAST)

001: MLSSTKLQPP KPAIFANPIF KQPFIDKSPP FRRRYTLPQA SLRFAKVSDS IASPLYSNPN ESSRLTSSVG QPPLQLSQWT LTQKHFVLLN VVACVTAISA
101: SWLFLAAIPT LLAFKKAAES VEKLLDVTRE ELPDTMAALR LSGMEISDLT MELSDLGQGI TQGVKSSTRA IRVAEDRLRR FTNMNPVASM QEVMHQTERK
201: ETEPVVAKAA RNLREGIVKG RSLWQLLFTI TRFSKTAASY FAKRVKQ

Best Arabidopsis Sequence Match ( AT5G09995.2 )
(BLAST)

001: MLFSPSKLQS PQSLISWNPI LHNGFIDKNL SFRRRVTLRL ASPISRLTKG SDSIASSTPS ALYSNPQEPS ISSQLTSSVG QPPLQLSQWT FTQKHFVLLN
101: VVACVTAISA SWLFFAAIPT LLAFKKAAES LEKLLDVTRE ELPDTMAAVR LSGMEISDLT MELSDLGQGI TQGVKSSTRA IRVAEDRLRR LTNMNPVASM
201: QEVMRQTKTD ETEPMLAKQA RSFREGVVKG RSLWQLFSTI TRFSKITTSY LAKRAKQ

Arabidopsis Description

unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G08530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Euk /.../s - 9610 (source: NCBI BLink). [Source:TAIR;Acc:AT5G09995]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.