Factsheet for GSMUA_Achr4P04620_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P05730_001	Banana	cytosol	74.34	78.34
GSMUA_Achr4P11550_001	Banana	cytosol, mitochondrion	76.69	73.94
GSMUA_Achr9P23090_001	Banana	mitochondrion	49.24	67.11
GSMUA_Achr1P23730_001	Banana	cytosol	61.52	66.87
PGSC0003DMT400024693	Potato	cytosol	32.0	64.8
CDY70252	Canola	plasma membrane	24.28	64.47
GSMUA_Achr2P00730_001	Banana	cytosol	56.0	63.44
CDY70022	Canola	cytosol	33.93	61.65
GSMUA_Achr9P14140_001	Banana	cytosol	59.03	59.44
GSMUA_AchrUn_...	Banana	cytosol	63.17	58.94
VIT_11s0065g00390.t01	Wine grape	cytosol	59.59	58.3
VIT_04s0008g02910.t01	Wine grape	cytosol	63.31	57.59
KRG93493	Soybean	cytosol	43.03	55.42
Solyc08g069180.2.1	Tomato	cytosol	52.28	55.01
Bra040779.1-P	Field mustard	cytosol	49.24	54.92
KRH16168	Soybean	cytosol	58.9	54.81
Bra032100.1-P	Field mustard	cytosol	57.52	54.72
KRH04920	Soybean	cytosol	60.14	54.43
PGSC0003DMT400035586	Potato	cytosol	59.31	54.16
AT4G31230.1	Thale cress	cytosol	56.97	54.06
AT2G24370.1	Thale cress	cytosol	58.48	53.81
GSMUA_Achr5P05020_001	Banana	cytosol	58.76	53.45
CDY55241	Canola	cytosol	54.48	53.38
CDY34775	Canola	cytosol	58.62	53.33
KRH52614	Soybean	plasma membrane	57.66	53.32
Bra007857.1-P	Field mustard	cytosol	58.48	53.2
CDY46145	Canola	cytosol	56.83	53.16
KRH60113	Soybean	nucleus	57.79	53.11
VIT_09s0054g01060.t01	Wine grape	cytosol	56.97	53.02
KRH61953	Soybean	cytosol	57.38	52.99
KRH41398	Soybean	nucleus	57.66	52.98
CDY33692	Canola	cytosol	52.83	52.9
Bra024016.1-P	Field mustard	cytosol	55.59	52.41
CDY13420	Canola	cytosol	55.59	52.41
CDX72299	Canola	cytosol	55.31	52.15
CDY20308	Canola	cytosol	57.52	52.12
CDY64004	Canola	cytosol	52.0	52.07
CDX93094	Canola	cytosol, nucleus, plastid	48.55	51.92
Bra013166.1-P	Field mustard	cytosol, nucleus, plastid	48.41	51.77
CDY50937	Canola	cytosol	48.83	51.68
Bra035539.1-P	Field mustard	cytosol	50.9	51.61
CDY59782	Canola	cytosol	52.41	51.49
CDY60522	Canola	cytosol	52.28	51.42
KRH09591	Soybean	nucleus, plasma membrane, plastid	55.31	51.41
AT2G07020.1	Thale cress	cytosol	49.52	51.29
Solyc08g006140.1.1	Tomato	cytosol	56.0	51.13
KRH23722	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	54.9	50.9
AT5G35380.1	Thale cress	cytosol	51.03	50.62
Solyc04g049400.2.1	Tomato	cytosol, mitochondrion, nucleus	54.62	50.57
AT1G78940.2	Thale cress	cytosol	52.41	50.4
PGSC0003DMT400033499	Potato	cytosol, nucleus, plastid	54.48	50.13
CDX81778	Canola	cytosol	50.62	50.07
Bra008387.1-P	Field mustard	nucleus	52.41	50.0
KRH74142	Soybean	peroxisome	55.03	50.0
CDY50990	Canola	cytosol	51.31	49.53
KRH49073	Soybean	nucleus	54.34	49.31
AT1G16760.2	Thale cress	cytosol	51.72	49.21
KRH46976	Soybean	nucleus	49.93	48.92
GSMUA_Achr2P15770_001	Banana	cytosol	49.38	48.64
Bra026027.1-P	Field mustard	nucleus	51.03	48.56
CDY35116	Canola	nucleus	51.03	48.56
CDY40035	Canola	nucleus	50.62	48.16
Bra016631.1-P	Field mustard	cytosol	49.66	47.81
Bra026707.1-P	Field mustard	cytosol, nucleus, plasma membrane	51.17	47.75
GSMUA_Achr8P05660_001	Banana	cytosol	53.52	47.49
CDX96806	Canola	cytosol	50.07	47.27
Bra035805.1-P	Field mustard	nucleus	49.38	46.74
CDY29801	Canola	nucleus	49.66	45.69
CDY25396	Canola	nucleus	49.66	45.11
AT3G20200.1	Thale cress	cytosol	47.45	44.1
GSMUA_Achr4P20700_001	Banana	cytosol	61.79	39.33
GSMUA_Achr7P09650_001	Banana	cytosol	32.55	32.11
GSMUA_Achr5P21060_001	Banana	cytosol	32.14	29.02
GSMUA_Achr11P...	Banana	cytosol	31.03	28.16
CDX88492	Canola	nucleus	52.41	28.07
CDX87421	Canola	cytosol	52.28	27.97
GSMUA_Achr1P17400_001	Banana	cytosol	25.38	24.83
CDX83940	Canola	cytosol	49.79	24.69
GSMUA_Achr7P04450_001	Banana	cytosol	25.1	23.27
GSMUA_AchrUn_...	Banana	cytosol	25.24	22.88
GSMUA_Achr5P12380_001	Banana	cytosol	24.83	22.5
GSMUA_Achr8P11510_001	Banana	cytosol	23.59	20.12
GSMUA_Achr10P...	Banana	cytosol	24.28	20.09

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.39.2	Gene3D:3.30.200.20	Gene3D:3.40.50.620	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr4G04620_001	EnsemblPlants:GSMUA_Achr4P04620_001	EnsemblPlants:GSMUA_Achr4T04620_001	InterPro:IPR000719
InterPro:IPR014729	InterPro:Kinase-like_dom_sf	UniProt:M0SL29	PFAM:PF00069	PFAM:PF00582	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF84	InterPro:Prot_kinase_dom	InterPro:Rossmann-like_a/b/a_fold	SMART:SM00220
SUPFAM:SSF52402	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000294D2B3	InterPro:UspA	SEG:seg

Description

Putative U-box domain-containing protein 52 [Source:GMGC_GENE;Acc:GSMUA_Achr4G04620_001]

Coordinates

chr4:+:3667917..3671350

Molecular Weight (calculated)

80300.5 Da

IEP (calculated)

8.447

GRAVY (calculated)

-0.462

Length

725 amino acids

Sequence
(BLAST)

001: MQRGMSQREK PDGAASPLVA VAIDKDKNSQ SAFKWALDNV VTKGQTLTLV HVNTKPSSGY EDDAAAVANT IREIFVPFRC FCTRKNVQCK DVVLEDTDVA
101: KAITEFVTNA AVEKLVIGSS SRSGFVRSFR STDLSTTICK GVPDFCSVYI ISKGKVSSMR NAVRPPPPVS LLRNQIQGQA SVKPDTLSQN AKNGTRGPVP
201: SDAALTPWNL QKDNESIKGG RASTTRSYGE SMADSDVSFV SSGRSSERSY PPRLSNLSDS YERSFESPRR SVGAVSSANG FSSVSHESSS SQNMEDVEAE
301: IRRLKLELKQ TMDMYSTACK EALTAKQKLQ RWKMDEEKRI KDARLAEEEA LALAESEKAR CVAAIQTAEA SKRIAENEAH KRISAEMKAF KDAEDKKKAF
401: DALSHTNLRY RRYTIEEIEV ATDYFAEERK IGEGGYGPVY RCTLDHTPVA IKVLRPDAAQ GRSQFQQEVE ILCCIRHPNM VLLLGACPEY GCLVYEYMAN
501: GSLDDRLFRR GNTPPIPWQH RFRIAAEIGT GLLFLHQTRP EPLVHRDLKP ANILLDRNYV SKISDVGLAR LVPPSYQQTG MLGIKSDIYS LGIMLLQIIT
601: GKPPMGLTHH VERSIEKGTF IEMLDHSVPD WPVEEALSLA KMSLKCAELR RKDRPDLATA ILPELNRLRD LAEENMQFSP FGTGSYTSPI HSQVSTQDIM
701: SGPGTVQSGY DSSRSRYSGS SIPGR

Best Arabidopsis Sequence Match ( AT2G24370.1 )
(BLAST)

001: MWMPKNNNVG VKEGGSSGVV AVAIDKDKSS QHALKWAVDN LLQRGQSVIL VHVKLRPSPL NNSASLHASS AKLSQDSSLV CRDPEGISKE IFLPFRCFCT
101: RKDIQCQDVL LEESDVAKAL VEYVNQAAIE VLVVGSSSKG GFLRFNKPTD IPGSITKNAP DFCTVYIISK GKIQTMRSAS RSAPMTAPLR SSVQPPSLKP
201: PQPMPSTSAN SLRADRRSFE SNQRRSVEDQ QRRSMEDQQR RSIDDQSESF RSPFTRRGNG RSYGDLTVPE SDISFISSGR PSIDRIFPSL YDNNDPSRTP
301: PRLSNFSDMD YSSSLDQSSN YGRRSVDMNS PTDFESERFS SASQSIDDVE AEMRRLKLEL KQTMEMYSTA CKEALTAKQK ATELQRWKLE EERKLEEARN
401: AEEAALAIAE KEKAKSKAAM EAAEAAQRIA ELEAKKRVNA EMKALKESEE KTKALTALAN SDVRYRKYSI EDIELATEFF AEKYKIGEGG YGPVYKCYLD
501: HTPVAVKVLR PDAAQGRSQF QQEVEVLSCI RHPNMVLLLG ACPECGCLVY EFMANGSLED RLFRLGNSPP LSWQMRFRIA AEIGTGLLFL HQAKPEPLVH
601: RDLKPGNILL DRNFVSKISD VGLARLVPPT VADTVTQYRM TSTAGTFCYI DPEYQQTGML GVKSDIYSLG IMFLQLITAK PPMGLTHYVE RALEKGTLVD
701: LLDPVVSDWP MEDTEEFAKL ALKCAELRRK DRPDLAKVIL PELNRLRTLA DESSHSVVVG NSPLPSPTGS QSSLKLEHMS GASISVPQ

Arabidopsis Description

Kinase with adenine nucleotide alpha hydrolases-like domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q1PF03]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.