Factsheet for GSMUA_Achr4P20700_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	plasma membrane
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P23730_001	Banana	cytosol	38.98	66.57
GSMUA_Achr4P05730_001	Banana	cytosol	37.58	62.21
CDY70252	Canola	plasma membrane	14.84	61.9
CDY70022	Canola	cytosol	21.69	61.9
GSMUA_Achr4P04620_001	Banana	cytosol, nucleus, plastid	39.33	61.79
GSMUA_AchrUn_...	Banana	cytosol	41.26	60.49
PGSC0003DMT400024693	Potato	cytosol	18.88	60.06
GSMUA_Achr2P00730_001	Banana	cytosol	33.63	59.84
GSMUA_Achr4P11550_001	Banana	cytosol, mitochondrion	38.98	59.04
GSMUA_Achr9P23090_001	Banana	mitochondrion	27.22	58.27
VIT_11s0065g00390.t01	Wine grape	cytosol	37.58	57.76
Solyc08g069180.2.1	Tomato	cytosol	33.36	55.15
GSMUA_Achr9P14140_001	Banana	cytosol	34.24	54.17
Bra040779.1-P	Field mustard	cytosol	30.9	54.15
VIT_04s0008g02910.t01	Wine grape	cytosol	37.66	53.83
Bra032100.1-P	Field mustard	cytosol	36.0	53.81
AT2G24370.1	Thale cress	cytosol	36.7	53.05
CDY55241	Canola	cytosol	34.33	52.84
CDY34775	Canola	cytosol	36.79	52.57
Bra007857.1-P	Field mustard	cytosol	36.79	52.57
CDY33692	Canola	cytosol	33.27	52.35
GSMUA_Achr5P05020_001	Banana	cytosol	36.52	52.2
CDX93094	Canola	cytosol, nucleus, plastid	30.99	52.06
Bra013166.1-P	Field mustard	cytosol, nucleus, plastid	30.99	52.06
CDY46145	Canola	cytosol	35.38	52.0
AT4G31230.1	Thale cress	cytosol	34.86	51.96
CDY64004	Canola	cytosol	33.01	51.93
Bra024016.1-P	Field mustard	cytosol	35.03	51.89
CDY13420	Canola	cytosol	35.03	51.89
PGSC0003DMT400035586	Potato	cytosol	35.82	51.39
CDX72299	Canola	cytosol	34.68	51.37
Bra035539.1-P	Field mustard	cytosol	32.22	51.33
CDY20308	Canola	cytosol	36.0	51.25
KRG93493	Soybean	cytosol	25.29	51.15
VIT_09s0054g01060.t01	Wine grape	cytosol	34.94	51.09
KRH04920	Soybean	cytosol	35.91	51.06
KRH16168	Soybean	cytosol	34.86	50.96
CDY50937	Canola	cytosol	30.55	50.8
CDY59782	Canola	cytosol	32.84	50.68
KRH52614	Soybean	plasma membrane	34.77	50.51
CDY60522	Canola	cytosol	32.66	50.47
Solyc08g006140.1.1	Tomato	cytosol	35.12	50.38
KRH61953	Soybean	cytosol	34.68	50.32
AT1G78940.2	Thale cress	cytosol	33.01	49.87
Bra008387.1-P	Field mustard	nucleus	33.19	49.74
AT2G07020.1	Thale cress	cytosol	30.55	49.71
AT5G35380.1	Thale cress	cytosol	31.78	49.52
KRH60113	Soybean	nucleus	34.24	49.43
KRH41398	Soybean	nucleus	33.89	48.92
CDX81778	Canola	cytosol	31.17	48.43
AT1G16760.2	Thale cress	cytosol	32.31	48.29
Bra026027.1-P	Field mustard	nucleus	31.87	47.64
CDY35116	Canola	nucleus	31.87	47.64
CDY40035	Canola	nucleus	31.78	47.51
CDY50990	Canola	cytosol	30.99	47.0
Solyc04g049400.2.1	Tomato	cytosol, mitochondrion, nucleus	32.22	46.87
Bra016631.1-P	Field mustard	cytosol	30.82	46.61
PGSC0003DMT400033499	Potato	cytosol, nucleus, plastid	32.22	46.57
Bra035805.1-P	Field mustard	nucleus	31.08	46.21
GSMUA_Achr2P15770_001	Banana	cytosol	29.76	46.06
KRH74142	Soybean	peroxisome	32.13	45.86
KRH09591	Soybean	nucleus, plasma membrane, plastid	31.34	45.77
CDX96806	Canola	cytosol	30.82	45.7
KRH49073	Soybean	nucleus	31.96	45.56
GSMUA_Achr8P05660_001	Banana	cytosol	32.66	45.53
Bra026707.1-P	Field mustard	cytosol, nucleus, plasma membrane	30.9	45.3
KRH23722	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	31.08	45.27
CDY29801	Canola	nucleus	31.26	45.18
KRH46976	Soybean	nucleus	29.06	44.73
CDY25396	Canola	nucleus	31.26	44.61
AT3G20200.1	Thale cress	cytosol	30.29	44.23
GSMUA_Achr7P09650_001	Banana	cytosol	19.49	30.2
CDX88492	Canola	nucleus	33.36	28.07
CDX87421	Canola	cytosol	33.27	27.97
GSMUA_Achr5P21060_001	Banana	cytosol	19.32	27.4
GSMUA_Achr11P...	Banana	cytosol	18.17	25.91
CDX83940	Canola	cytosol	30.9	24.08
GSMUA_Achr7P04450_001	Banana	cytosol	15.54	22.63
GSMUA_Achr5P12380_001	Banana	cytosol	15.72	22.38
GSMUA_AchrUn_...	Banana	cytosol	15.63	22.25
GSMUA_Achr1P17400_001	Banana	cytosol	14.4	22.13
GSMUA_Achr8P11510_001	Banana	cytosol	15.36	20.59
GSMUA_Achr10P...	Banana	cytosol	15.36	19.98

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.37.1	MapMan:18.4.1.39.2	Gene3D:3.30.200.20	Gene3D:3.40.50.620	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr4G20700_001	EnsemblPlants:GSMUA_Achr4P20700_001	EnsemblPlants:GSMUA_Achr4T20700_001
InterPro:IPR000719	InterPro:IPR014729	InterPro:Kinase-like_dom_sf	UniProt:M0SQN3	PFAM:PF00069	PFAM:PF00582
PFAM:PF07714	PIRSF:PIRSF000615	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003
PANTHER:PTHR27003:SF145	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	InterPro:Rossmann-like_a/b/a_fold	SMART:SM00220	SUPFAM:SSF52402
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00029646CF	InterPro:UspA	SEG:seg

Description

Putative Protein kinase APK1B, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr4G20700_001]

Coordinates

chr4:-:21247578..21256542

Molecular Weight (calculated)

126512.0 Da

IEP (calculated)

7.822

GRAVY (calculated)

-0.370

Length

1139 amino acids

Sequence
(BLAST)

0001: MFDISLFVAY YQQKDPCQPN VVSLLPLPKD VEDLRLTVGY GNVYIFTYSE LSAATKNFRA DQVLGEGGFG IVYKGIIDEN VRPGFESTQV AVKKLNPEGV
0101: QGDKEWLAEV NYLGQLSHPN LVKLIGYCCE DDHRLLVYEY MACGSLEKHL FRRVCLTMQW STRMKIALGA ANGLAFLHGA ERPIIYRDFK TSNILLDSAY
0201: NPKLSDFGLA KEGPIGDQTH VSTRVVGTQG YAAPEYIMTG HLTARSDVYG FGVVLLEILT GKKAVDKSRP AREQNLVAGL ALRCLSQNPK GRPTMNQVVD
0301: TLESVQDPHG SREEVLLLFE APKASSSDSS SAKKGEESRR RSKQGKGRSK SEPPAGFNVS SCSPDADGQS HQRMESAGPP KEKERYQEKG EEGAEELTFS
0401: ATFLCISSSS YSSLCQKRAM PEGSDRSSFP LIAVAVDKDK SSQNALKWAL DNVAVKGQTI FLVHVITKLS AGHQEDVTSA ASQLLVPFRC FCKRKNVRCK
0501: DIILEDTDLA KAIVDFVSHA GVEKLIVGAS KGGFVRSFRY TDVSTNICKS VPDFCTVYII SKGKISSMRN AVRSAPVVTP LRSQILKQPS SVPEPVVYQN
0601: SQGTKGFFCN EHHQLLLPCH LLGEDKFLLV SLPEKTNKFP FARSPLNSTT RVQSTKSKEE TMSGSDEPFF SSGKPSIDHL FPQRLSCISD GLDCSFESVQ
0701: SPHRSSLDAY SSRSGFSPRS NGSFSSQMSE EVKAEMNRLK LELKQTMDMY STACREALTA KQKAMELHRW KMEEQQRLEE AQLAEEAALI LADKEKAKCK
0801: AALEAAEAAK RIAELEAQKR INAEMQALQE PGKKKSSSIL SKTDLRYRKY TIEDIEAATE NFAENRKIGE GGYGPVYRCY LDHTPVAIKA LRPDASQGRS
0901: QFQQEVEILS CIRHPNMVLL LGACPEYGCL VYEYMANGSL EDRLYRRGNT PPIPWQHRDL KPANILLDQY YVSKISDVGL ARLVPPSVAD SVTQYHMTSA
1001: AGTFCYIDPE YQQTGMLGIK SDIYSFGVLL LQLLTGKPPM GLTHHVERSI EKGTFADMLD PAVQDWPVEE ALGLLKLALK CAELRRKDRP DLGTIILPEL
1101: NRLRTLGEEN MQHFVLRNCF RTSNIYNQIP MQELKSGPA

Best Arabidopsis Sequence Match ( AT1G16760.1 )
(BLAST)

001: MWLPKADATK KGTRNGSVAI AIDKDKSSQN AIKWTLENLA TRGQTLALIH VLPKSQSSLD IEEGITHKQQ MEKQTKDLFV SFHCYCSRKE IHCLDVVLED
101: VDKVKAIVEY VTVSAIENLV LGAPSRNSFM RRFKTDLPTS VSKAAPDFCN VYVISKGKIS SLRNASRLAP YHPSVLSEVD DHETIAIERK HKTANTPALP
201: KGRRSIDSDV TRLGLPKPPH GHMKLMGDFS DSESEFSFIS ASQQESSDLS FISSGRPSVD RSSFTYDLPE SARTSRMSTS SEQSIGSHRL GIKFTDLSYL
301: NGSSSVSDES GRTSCSFSSQ SLNDVEAQMK RLRLELKQTM DMYSSACREA LTARNEATEL QKLRTEEERR LEELKMTEET AMSIVENERA KAKTALEAAE
401: AANRLAEVEA KRRVHAEMKV LKESDSFSRH SIVRYRKYSV QEIEEGTANF AESRKVGEGG YGPVFRGHLD HTSVAVKVLR PDAAQGRSQF HKEVEVLSCI
501: RHPNMVLLLG ACPEYGILVY EYMARGSLDD RLFRRGNTPP ISWQLRFRIA AEIATGLLFL HQTKPEPIVH RDLKPGNVLL DHNYVSKISD VGLARLVPAV
601: AENVTQYRVT SAAGTFCYID PEYQQTGMLG VKSDVYSLGI MLLQLLTAKQ PMGLAYYVEQ AIEEGTLKDM LDPAVPDWPL EEALSLAKLS LQCAELRRKD
701: RPDLGKEVMP ELSRLREIGE ESLDSVYYAG QGRSSHPSQV SYTSVRVFNG KTLTSDWM

Arabidopsis Description

Protein kinase protein with adenine nucleotide alpha hydrolases-like domain [Source:TAIR;Acc:AT1G16760]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.