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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035805.1-P Field mustard nucleus 94.86 98.83
CDY29801 Canola nucleus 97.37 98.6
AT3G20200.1 Thale cress cytosol 84.21 86.15
CDY70252 Canola plasma membrane 24.31 71.06
CDY70022 Canola cytosol 32.33 64.66
CDX81778 Canola cytosol 53.76 58.53
CDY35116 Canola nucleus 55.14 57.74
CDY40035 Canola nucleus 55.01 57.61
CDY50990 Canola cytosol 54.01 57.39
CDX96806 Canola cytosol 53.88 55.99
VIT_09s0054g01060.t01 Wine grape cytosol 53.88 55.2
KRG93493 Soybean cytosol 38.72 54.88
GSMUA_Achr2P00730_001 Banana cytosol 42.61 53.12
GSMUA_Achr9P23090_001 Banana mitochondrion 34.84 52.26
KRH46976 Soybean nucleus 48.12 51.89
CDY13420 Canola cytosol 49.75 51.63
KRH23722 Soybean cytosol, mitochondrion, nucleus, plasma membrane 50.5 51.53
Solyc04g049400.2.1 Tomato cytosol, mitochondrion, nucleus 50.5 51.47
CDX72299 Canola cytosol 49.37 51.24
KRH09591 Soybean nucleus, plasma membrane, plastid 49.87 51.03
PGSC0003DMT400033499 Potato cytosol, nucleus, plastid 50.13 50.76
CDY55241 Canola cytosol 46.99 50.68
CDY67812 Canola cytosol 38.1 50.58
CDY34775 Canola cytosol 50.5 50.56
CDY46145 Canola cytosol 48.62 50.06
GSMUA_Achr4P05730_001 Banana cytosol 43.11 50.0
CDY33692 Canola cytosol 45.24 49.86
GSMUA_Achr1P23730_001 Banana cytosol 41.6 49.78
CDY59782 Canola cytosol 45.99 49.73
CDY64004 Canola cytosol 45.11 49.72
GSMUA_Achr9P14140_001 Banana cytosol 44.86 49.72
CDX93094 Canola cytosol, nucleus, plastid 42.23 49.7
GSMUA_Achr4P04620_001 Banana cytosol, nucleus, plastid 45.11 49.66
CDY60522 Canola cytosol 45.61 49.39
CDY20308 Canola cytosol 49.37 49.25
CDY50937 Canola cytosol 41.85 48.76
GSMUA_Achr5P05020_001 Banana cytosol 47.87 47.93
CDX97160 Canola cytosol 41.98 47.86
CDX69713 Canola cytosol 41.6 47.56
GSMUA_AchrUn_... Banana cytosol 45.86 47.1
GSMUA_Achr4P11550_001 Banana cytosol, mitochondrion 44.36 47.07
CDY05538 Canola cytosol 40.23 45.6
CDY24991 Canola cytosol 40.23 45.6
CDX96762 Canola cytosol 36.22 40.93
CDX96431 Canola nucleus 35.59 40.8
CDX83902 Canola cytosol 36.09 39.89
CDY48312 Canola cytosol, nucleus, plastid 36.22 39.48
CDX72942 Canola cytosol 34.84 39.21
CDY53871 Canola cytosol, nucleus, plastid 33.58 38.56
CDY49864 Canola cytosol, nucleus, plastid 33.33 38.33
CDY26235 Canola cytosol, nucleus, plastid 36.09 37.5
CDX91180 Canola cytosol 41.73 36.8
CDY12184 Canola endoplasmic reticulum, golgi, mitochondrion, plasma membrane 22.68 34.22
CDX88492 Canola nucleus 55.64 32.79
CDX87421 Canola cytosol 55.51 32.69
GSMUA_Achr4P20700_001 Banana cytosol 44.61 31.26
CDX88604 Canola plastid 30.08 30.46
CDY11888 Canola cytosol, plastid 29.95 30.33
CDX83940 Canola cytosol 54.26 29.62
CDY38258 Canola cytosol 28.32 29.54
CDY12864 Canola cytosol 30.2 29.53
CDY02134 Canola cytosol 28.45 29.44
CDY54384 Canola cytosol 28.2 29.41
CDY11059 Canola plastid 29.82 29.31
CDX92680 Canola plastid 29.57 29.21
CDY42870 Canola cytosol 28.95 29.17
CDY00462 Canola mitochondrion, plasma membrane 23.18 29.04
CDY68766 Canola cytosol, plastid 28.82 29.04
CDY23058 Canola cytosol, plastid 28.82 29.04
CDY39152 Canola cytosol 29.7 28.62
CDX82677 Canola cytosol 29.57 28.54
CDX87221 Canola cytosol 26.07 28.26
CDY34347 Canola plastid 29.7 28.21
CDY01401 Canola plastid 29.57 28.03
CDY00464 Canola cytosol 27.19 27.96
CDY02135 Canola cytosol 29.57 27.96
CDX99935 Canola cytosol 25.94 27.9
CDY16812 Canola cytosol 27.69 27.73
CDY23059 Canola cytosol 29.45 27.71
CDY00461 Canola cytosol 27.44 27.58
CDY16329 Canola plastid 27.32 27.53
CDX87220 Canola cytosol, peroxisome, plasma membrane 28.32 27.33
CDX91574 Canola plastid 27.07 27.07
CDY16813 Canola cytosol 28.07 26.99
CDY42871 Canola cytosol 27.44 26.64
CDY61455 Canola cytosol 26.44 26.02
CDY27350 Canola plastid 25.19 25.28
CDY37074 Canola plastid 24.81 24.15
CDX74774 Canola nucleus, plastid 24.06 23.97
CDY18889 Canola nucleus, plastid 23.81 23.63
CDX82676 Canola cytosol 24.94 22.69
CDY08105 Canola cytosol 21.93 21.79
CDY05898 Canola cytosol 21.43 21.43
CDX86996 Canola nucleus 21.05 21.24
CDY37899 Canola cytosol 20.55 20.35
CDY03375 Canola plastid 29.32 18.04
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.39.2Gene3D:3.30.200.20Gene3D:3.40.50.620GO:A0A078GJ35UniProt:A0A078GJ35
EnsemblPlants:CDY25396ProteinID:CDY25396ProteinID:CDY25396.1ncoils:CoilGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0006950GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00029526001InterPro:IPR000719InterPro:IPR014729InterPro:Kinase-like_dom_sfPFAM:PF00582
PFAM:PF07714ScanProsite:PS00108ScanProsite:PS00430PFscan:PS50011PANTHER:PTHR27003PANTHER:PTHR27003:SF84
InterPro:Prot_kinase_domInterPro:Rossmann-like_a/b/a_foldSMART:SM00220SUPFAM:SSF52402SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_ASInterPro:TonB_box_CSUniParc:UPI0004EEA895InterPro:UspASEG:seg:
Description
BnaA05g18880DBnaA05g18880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GJ35]
Coordinates
chrLK032174:+:496311..500533
Molecular Weight (calculated)
88108.6 Da
IEP (calculated)
8.096
GRAVY (calculated)
-0.405
Length
798 amino acids
Sequence
(BLAST)
001: MKSQKVKVKK KKKNVDSGLV AVAVDKDKGS QHALKWAADR LVSKGDTIIL LHVIHRSSSD SVEVTAEKHK QAENLFVTFH CYCSRKEIQC LDVTLEDDSI
101: VKSLAEYVSS GVIENLVLGA PSRHGFMRKF KMSDTPSNVA KAAPDFCTVY VISKGKISSV RHARRDAPYQ SPLIAQIENH SALTNYEKFR NTMSFRDRTP
201: ARSSVSSSIE DFGKSPLART SNNANSFYDL SDSDNDISFV SSGRPSITSS GRRSITSSER PSTSTNGRSD ISFVSSGRPS TSTTGSPSFI YEFPDSGLTP
301: RMSTGSGQSV GSMRLGINIQ HDFSFISQDS GRSSCSCSPQ NLEDVEAEMR RLKLELKHTI DLYGSACREA LAAKQEAKEL QRQKMEEEGW GQEGQLSEKS
401: TKLIAEKERA NKAAMDASET ANKIADLETQ RRAIESGDAF SDSNLRYRRY VIGEIEEATN SFDKANKIGE GGYGPVYKGH LDHTPVAIKV LRPDAAQGRS
501: QFQREVEVLS CIRHPHMVLL IGACPEYGVL VYEYMGKGSL ADRLYRNGNT PPLSWELRFR IAAEVATGLL FLHQTKPEPI VHRDLKPGNI LIDQNYVSKI
601: GDVGLARLVP AVAENVTQCH VTSTAGTFCY IDPEYQQTGM LGVKSDVYSF GILLLELLTA KKPTGLSYTV EQAIEKGTFK DMLDPAVLNW PVEEALSLAK
701: VALKCAQLRR KDRPDLGKEV LPELNRLRAL ADANMEWIMF NYSRGPSPRH SLISLPTVDE MSVTSDGSNT HSSTLSDIEK NLGALLLSIF LKHYHVCC
Best Arabidopsis Sequence Match ( AT3G20200.1 )
(BLAST)
001: MKAQKGSSKK KGTNSGLVAV AVDNNKGSQH ALKWAADHLV SKGQTIILLH VILRSSSDSG EITAEKHKQA ENLFVTFHCY CSRKEIQCLD VTLEDDNIVK
101: SLAEYVSSGV IENLILGAPS RHGFMRKFKI SDTPSNVAKA APDFCTVYVI SKGKISSVRH ASRAAPYRSP LMGQIENHSE IINYEKFRNT MSFRDRAPPR
201: SSTASSIEDY GKSPMARTSN YANSFFDLED SENDISFVCS GRPSTASSGR PSTSTGRSDI SFVSSGRPST STTGSPSFIY DFPDSGLTPR ESTSSGHSMR
301: LGIRFNDTNI QHDFSFVSQD SGRSSCSCSP QNLEEVEAEM RRLKQELKHA IDMYGSACRE ALAAKQEAKE LQRQKIEEEG WVQEGQLSEK STKSIVEKER
401: AHKAAKDASE TAGKIAELET QRRAIEAAGS FSDSSLRYRR YVIGEIEEAT NSFDKANKIG EGGYGPVYKG YLDHTPVAIK ALKADAVQGR SQFQREVEVL
501: SCIRHPHMVL LIGACPEYGV LVYEYMAKGS LADRLYKYGN TPPLSWELRF RIAAEVATGL LFLHQTKPEP IVHRDLKPGN ILIDQNYVSK IGDVGLAKLV
601: PAVAENVTQC HVSSTAGTFC YIDPEYQQTG MLGVKSDVYS FGILLLELLT AKRPTGLAYT VEQAMEQGKF KDMLDPAVPN WPVEEAMSLA KIALKCAQLR
701: RKDRPDLGKE VLPELNKLRA RADTNMEWMM FNLSRGRLTP NHSQVSLPPV DELSVCSDKS YTHSSTVSDT EKNSDQNEED
Arabidopsis Description
At3g20200 [Source:UniProtKB/TrEMBL;Acc:Q8GWU3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.