Factsheet for GSMUA_Achr4P11550_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P04620_001	Banana	cytosol, nucleus, plastid	73.94	76.69
GSMUA_Achr4P05730_001	Banana	cytosol	68.48	74.85
GSMUA_Achr9P23090_001	Banana	mitochondrion	48.01	67.86
GSMUA_Achr1P23730_001	Banana	cytosol	59.04	66.57
PGSC0003DMT400024693	Potato	cytosol	30.98	65.08
GSMUA_Achr2P00730_001	Banana	cytosol	54.79	64.38
CDY70252	Canola	plasma membrane	23.14	63.74
CDY70022	Canola	cytosol	33.64	63.41
GSMUA_AchrUn_...	Banana	cytosol	61.84	59.85
VIT_11s0065g00390.t01	Wine grape	cytosol	58.91	59.78
GSMUA_Achr9P14140_001	Banana	cytosol	57.05	59.58
VIT_04s0008g02910.t01	Wine grape	cytosol	61.17	57.72
Solyc08g069180.2.1	Tomato	cytosol	51.33	56.02
Bra032100.1-P	Field mustard	cytosol	56.52	55.77
AT2G24370.1	Thale cress	cytosol	57.85	55.2
KRG93493	Soybean	cytosol	41.09	54.88
GSMUA_Achr5P05020_001	Banana	cytosol	57.85	54.58
CDY55241	Canola	cytosol	53.59	54.46
CDY34775	Canola	cytosol	57.71	54.45
Bra007857.1-P	Field mustard	cytosol	57.71	54.45
PGSC0003DMT400035586	Potato	cytosol	57.45	54.41
CDY46145	Canola	cytosol	55.85	54.19
Bra040779.1-P	Field mustard	cytosol	46.54	53.85
KRH16168	Soybean	cytosol	55.72	53.79
AT4G31230.1	Thale cress	cytosol	54.52	53.66
KRH52614	Soybean	plasma membrane	55.45	53.19
KRH04920	Soybean	cytosol	56.65	53.18
VIT_09s0054g01060.t01	Wine grape	cytosol	55.05	53.15
CDY20308	Canola	cytosol	56.52	53.12
KRH61953	Soybean	cytosol	55.45	53.12
KRH60113	Soybean	nucleus	55.32	52.73
CDX72299	Canola	cytosol	53.72	52.54
CDY13420	Canola	cytosol	53.72	52.54
Bra024016.1-P	Field mustard	cytosol	53.72	52.54
Solyc08g006140.1.1	Tomato	cytosol	55.32	52.39
Bra008387.1-P	Field mustard	nucleus	52.93	52.37
KRH41398	Soybean	nucleus	54.65	52.09
CDY33692	Canola	cytosol	50.13	52.07
AT1G78940.2	Thale cress	cytosol	51.6	51.46
CDY64004	Canola	cytosol	49.2	51.1
KRH09591	Soybean	nucleus, plasma membrane, plastid	52.93	51.03
Solyc04g049400.2.1	Tomato	cytosol, mitochondrion, nucleus	52.93	50.83
KRH23722	Soybean	cytosol, mitochondrion, nucleus, plasma membrane	52.79	50.77
CDX93094	Canola	cytosol, nucleus, plastid	45.74	50.74
Bra013166.1-P	Field mustard	cytosol, nucleus, plastid	45.61	50.59
AT2G07020.1	Thale cress	cytosol	47.07	50.57
PGSC0003DMT400033499	Potato	cytosol, nucleus, plastid	52.79	50.38
Bra035539.1-P	Field mustard	cytosol	47.74	50.21
CDX81778	Canola	cytosol	48.94	50.2
KRH74142	Soybean	peroxisome	53.19	50.13
AT5G35380.1	Thale cress	cytosol	48.67	50.07
CDY59782	Canola	cytosol	49.07	50.0
CDY50990	Canola	cytosol	49.73	49.8
CDY60522	Canola	cytosol	48.8	49.8
CDY50937	Canola	cytosol	45.35	49.78
KRH49073	Soybean	nucleus	52.66	49.56
AT1G16760.2	Thale cress	cytosol	50.13	49.48
GSMUA_Achr2P15770_001	Banana	cytosol	48.27	49.32
KRH46976	Soybean	nucleus	47.87	48.65
Bra026027.1-P	Field mustard	nucleus	49.07	48.43
CDY35116	Canola	nucleus	49.07	48.43
Bra016631.1-P	Field mustard	cytosol	48.4	48.34
CDY40035	Canola	nucleus	48.8	48.16
Bra026707.1-P	Field mustard	cytosol, nucleus, plasma membrane	49.6	48.01
CDX96806	Canola	cytosol	48.8	47.79
GSMUA_Achr8P05660_001	Banana	cytosol	50.8	46.76
Bra035805.1-P	Field mustard	nucleus	46.68	45.82
CDY29801	Canola	nucleus	46.81	44.67
CDY25396	Canola	nucleus	47.07	44.36
AT3G20200.1	Thale cress	cytosol	45.74	44.1
GSMUA_Achr4P20700_001	Banana	cytosol	59.04	38.98
GSMUA_Achr7P09650_001	Banana	cytosol	30.85	31.56
CDX88492	Canola	nucleus	52.93	29.39
GSMUA_Achr5P21060_001	Banana	cytosol	31.38	29.39
CDX87421	Canola	cytosol	52.93	29.37
GSMUA_Achr11P...	Banana	cytosol	30.72	28.91
CDX83940	Canola	cytosol	48.67	25.03
GSMUA_Achr1P17400_001	Banana	cytosol	23.8	24.16
GSMUA_AchrUn_...	Banana	cytosol	24.07	22.62
GSMUA_Achr5P12380_001	Banana	cytosol	23.94	22.5
GSMUA_Achr7P04450_001	Banana	cytosol	23.27	22.38
GSMUA_Achr8P11510_001	Banana	cytosol	23.54	20.82
GSMUA_Achr10P...	Banana	cytosol	22.74	19.52

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.39.2	Gene3D:3.30.200.20	Gene3D:3.40.50.620	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr4G11550_001	EnsemblPlants:GSMUA_Achr4P11550_001	EnsemblPlants:GSMUA_Achr4T11550_001	InterPro:IPR000719
InterPro:IPR014729	InterPro:Kinase-like_dom_sf	UniProt:M0SN20	PFAM:PF00582	PFAM:PF07714	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF84	InterPro:Prot_kinase_dom	InterPro:Rossmann-like_a/b/a_fold	SMART:SM00220
SUPFAM:SSF52402	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002951178	InterPro:UspA
SEG:seg	:	:	:	:	:

Description

Putative U-box domain-containing protein 52 [Source:GMGC_GENE;Acc:GSMUA_Achr4G11550_001]

Coordinates

chr4:-:8312014..8316359

Molecular Weight (calculated)

84133.4 Da

IEP (calculated)

7.702

GRAVY (calculated)

-0.411

Length

752 amino acids

Sequence
(BLAST)

001: MLRGMSHREK ANSAACRLVA VAIDKDKSSQ SALKWALDNV VTRGQTLTLI HVNTRPSSGY RDDASSAAIS RDVFIPFRCF CTRKDHDLCI PEQVQCKDVI
101: LEDTDVAEAI SDFITHAAIE KLVVGSSSRG GFVRLSFRTI DLSASICKGV PDFCTVYIIS KGKVSSMRNA VRPPPTISSL RNQIQEQASV NPEPQDHKPK
201: NGMKNLCCYK YYISVCYPPN MLNNKISASN RSPFTRGGRT STTKSYGDLM LDSDISFVSS GGTSMEHSFP PRSSNVSDSF DLSFESLSRS LGSNSGGNDL
301: SSFSYESSSS QAMEDVEAEI RRLRLQLKQT MDMYSTACKE ALTAKQKAME LQRWKVEEGQ RLKEARQAEE AALALVERER AKCMAAIQTA EASKRIAESE
401: AQKRISAEMQ ALKEEEERRK AIDSLSHTSL RYRRYTIEEI EVATEYFANE RKIGEGGYGP VYRCYLDHTP VAVKVLRPDA AQGRSQFQQE VEILCCIRHP
501: NMVLLLGACP EYGCLVYEYM ANGSLEDRLL RRGNTPPIPW QHRFRITAEI GMCLLFLHQT KPEPLVHRDL KPANILLDRN YVSKISDVGL ARLVPPSYQQ
601: TGMLGIKSDI YSLGIMLLQI ISGRPPMGLT HYVERAIETG TFVEMLDYTV PDWPMDEALS LAKLALKCAE LRRRDRPDLA TVILPELNRL RDFAEENMQY
701: SLFGNSSHLS PMQSQVSTQE TRSDPETMQS GYESSISQFS GSSTPGRRLS TS

Best Arabidopsis Sequence Match ( AT2G24370.1 )
(BLAST)

001: MWMPKNNNVG VKEGGSSGVV AVAIDKDKSS QHALKWAVDN LLQRGQSVIL VHVKLRPSPL NNSASLHASS AKLSQDSSLV CRDPEGISKE IFLPFRCFCT
101: RKDIQCQDVL LEESDVAKAL VEYVNQAAIE VLVVGSSSKG GFLRFNKPTD IPGSITKNAP DFCTVYIISK GKIQTMRSAS RSAPMTAPLR SSVQPPSLKP
201: PQPMPSTSAN SLRADRRSFE SNQRRSVEDQ QRRSMEDQQR RSIDDQSESF RSPFTRRGNG RSYGDLTVPE SDISFISSGR PSIDRIFPSL YDNNDPSRTP
301: PRLSNFSDMD YSSSLDQSSN YGRRSVDMNS PTDFESERFS SASQSIDDVE AEMRRLKLEL KQTMEMYSTA CKEALTAKQK ATELQRWKLE EERKLEEARN
401: AEEAALAIAE KEKAKSKAAM EAAEAAQRIA ELEAKKRVNA EMKALKESEE KTKALTALAN SDVRYRKYSI EDIELATEFF AEKYKIGEGG YGPVYKCYLD
501: HTPVAVKVLR PDAAQGRSQF QQEVEVLSCI RHPNMVLLLG ACPECGCLVY EFMANGSLED RLFRLGNSPP LSWQMRFRIA AEIGTGLLFL HQAKPEPLVH
601: RDLKPGNILL DRNFVSKISD VGLARLVPPT VADTVTQYRM TSTAGTFCYI DPEYQQTGML GVKSDIYSLG IMFLQLITAK PPMGLTHYVE RALEKGTLVD
701: LLDPVVSDWP MEDTEEFAKL ALKCAELRRK DRPDLAKVIL PELNRLRTLA DESSHSVVVG NSPLPSPTGS QSSLKLEHMS GASISVPQ

Arabidopsis Description

Kinase with adenine nucleotide alpha hydrolases-like domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q1PF03]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.