Factsheet for GSMUA_Achr5P03810_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P27810_001	Banana	mitochondrion	74.07	76.92
GSMUA_Achr6P01300_001	Banana	mitochondrion	73.46	75.08
GSMUA_Achr1P27800_001	Banana	mitochondrion	75.0	74.31
GSMUA_Achr6P01170_001	Banana	mitochondrion	71.3	70.43
CDY46328	Canola	mitochondrion	67.59	67.8
CDY34257	Canola	mitochondrion	67.28	67.49
Bra023835.1-P	Field mustard	mitochondrion	67.28	67.28
VIT_02s0033g01400.t01	Wine grape	mitochondrion	65.12	65.94
KRH62683	Soybean	mitochondrion	64.81	65.42
AT3G22360.1	Thale cress	mitochondrion	65.43	65.23
PGSC0003DMT400047562	Potato	mitochondrion	55.25	64.16
Bra001865.1-P	Field mustard	mitochondrion	67.9	63.58
CDY69421	Canola	mitochondrion	67.28	63.01
PGSC0003DMT400019708	Potato	mitochondrion	69.14	62.92
AT3G27620.1	Thale cress	mitochondrion	63.89	62.92
Bra031351.1-P	Field mustard	mitochondrion	69.44	62.5
Solyc08g075540.2.1	Tomato	plastid	68.83	62.29
CDY37409	Canola	mitochondrion	69.14	62.22
CDY10636	Canola	mitochondrion	68.83	61.94
AT3G22370.1	Thale cress	mitochondrion	67.28	61.58
CDX92940	Canola	mitochondrion	66.98	61.3
Solyc08g075550.2.1	Tomato	mitochondrion	58.64	59.75
VIT_02s0033g01380.t01	Wine grape	mitochondrion	58.95	59.32
PGSC0003DMT400019707	Potato	mitochondrion	58.02	58.57
CDY68662	Canola	mitochondrion	57.41	58.31
Bra010153.1-P	Field mustard	mitochondrion	57.1	57.99
CDY53287	Canola	mitochondrion	57.1	57.99
AT1G32350.1	Thale cress	mitochondrion	56.17	57.23
Solyc08g005550.2.1	Tomato	mitochondrion, plastid	63.58	56.28

Protein Annotations

Gene3D:1.20.1260.140	MapMan:2.4.2.2	InterPro:AOX	InterPro:AOX_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009916	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	GO:GO:0070469	GO:GO:0102721
EnsemblPlantsGene:GSMUA_Achr5G03810_001	EnsemblPlants:GSMUA_Achr5P03810_001	EnsemblPlants:GSMUA_Achr5T03810_001	InterPro:IPR038659	UniProt:M0SVG0	PFAM:PF01786
PANTHER:PTHR31803	PANTHER:PTHR31803:SF17	UniParc:UPI0002954C51	SEG:seg	:	:

Description

Alternative oxidase 1a, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr5G03810_001]

Coordinates

chr5:-:2628412..2629715

Molecular Weight (calculated)

36678.2 Da

IEP (calculated)

8.908

GRAVY (calculated)

-0.185

Length

324 amino acids

Sequence
(BLAST)

001: MMMSSRNSGS TVLRHLGFRL FSSAVATRVT ASEPAHSLVL SRPFVPSAPA RPPASEREAK SSAPAAPTSG SKAVASYWGI RGSQITKDDG TPWRWSCFMP
101: WETYEADLSI DLKKHHVPRT LLDKIAYWTV KSLRFPTDIF FQRRYGCRAM MLETVAAVPG MVGGMLLHLR SLRRFEPSGG WIRVLLEEAE NERMHLMTFM
201: EVAQPRWYER ALVFAVQGVF FNAYFVAYLL SPKLAHRMVG YLEEEAIHSY TEYLKDLEAG KIENVPAPAI AMDYWRLPAD ATLKDVVMVV RADEAHHRDV
301: NHFASDIHYQ GMQLKDTPAP LGYH

Best Arabidopsis Sequence Match ( AT3G22370.1 )
(BLAST)

001: MMITRGGAKA AKSLLVAAGP RLFSTVRTVS SHEALSASHI LKPGVTSAWI WTRAPTIGGM RFASTITLGE KTPMKEEDAN QKKTENESTG GDAAGGNNKG
101: DKGIASYWGV EPNKITKEDG SEWKWNCFRP WETYKADITI DLKKHHVPTT FLDRIAYWTV KSLRWPTDLF FQRRYGCRAM MLETVAAVPG MVGGMLLHCK
201: SLRRFEQSGG WIKALLEEAE NERMHLMTFM EVAKPKWYER ALVITVQGVF FNAYFLGYLI SPKFAHRMVG YLEEEAIHSY TEFLKELDKG NIENVPAPAI
301: AIDYWRLPAD ATLRDVVMVV RADEAHHRDV NHFASDIHYQ GRELKEAPAP IGYH

Arabidopsis Description

AOX1AUbiquinol oxidase 1a, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q39219]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.