Factsheet for GSMUA_Achr1P27800_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P27810_001	Banana	mitochondrion	82.87	86.86
GSMUA_Achr6P01300_001	Banana	mitochondrion	77.98	80.44
GSMUA_Achr5P03810_001	Banana	mitochondrion	74.31	75.0
HORVU6Hr1G068150.6	Barley	cytosol, peroxisome	61.77	73.72
Os04t0600200-01	Rice	golgi	72.78	71.69
Zm00001d002436_P001	Maize	extracellular, plasma membrane	71.87	71.43
EES12782	Sorghum	mitochondrion	68.5	71.34
EES12781	Sorghum	mitochondrion	71.25	70.39
Zm00001d002435_P001	Maize	mitochondrion	69.42	69.0
GSMUA_Achr6P01170_001	Banana	mitochondrion	69.11	68.9
TraesCS6B01G296400.1	Wheat	mitochondrion	71.25	68.53
TraesCS2A01G439400.1	Wheat	mitochondrion	68.5	68.29
CDY46328	Canola	mitochondrion	67.28	68.11
CDY34257	Canola	mitochondrion	66.97	67.8
TraesCS2B01G459300.1	Wheat	mitochondrion	68.2	67.78
Bra023835.1-P	Field mustard	mitochondrion	66.97	67.59
TraesCS2D01G436700.1	Wheat	mitochondrion	69.42	67.56
Os02t0700400-01	Rice	mitochondrion	71.25	67.54
AT3G22360.1	Thale cress	mitochondrion	66.67	67.08
EES12783	Sorghum	mitochondrion	67.89	66.87
Os04t0600300-01	Rice	mitochondrion	68.5	66.87
EES05672	Sorghum	mitochondrion	70.03	66.19
TraesCS2B01G459100.1	Wheat	mitochondrion	66.67	66.06
Bra001865.1-P	Field mustard	mitochondrion	69.72	65.9
KRH62683	Soybean	mitochondrion	64.53	65.73
Zm00001d017727_P001	Maize	extracellular	69.72	65.71
CDY69421	Canola	mitochondrion	69.42	65.61
TraesCS2D01G436100.1	Wheat	mitochondrion	65.44	65.24
TraesCS2A01G438200.1	Wheat	mitochondrion	65.44	64.85
AT3G27620.1	Thale cress	mitochondrion	64.83	64.44
TraesCS2A01G438300.1	Wheat	mitochondrion	64.83	64.44
TraesCS2D01G436200.1	Wheat	mitochondrion	64.22	64.42
Zm00001d002434_P001	Maize	mitochondrion	64.83	63.86
TraesCS2B01G459000.1	Wheat	mitochondrion	64.22	63.83
CDX92940	Canola	mitochondrion	68.81	63.56
TraesCS2A01G439100.1	Wheat	mitochondrion	63.61	63.22
HORVU0Hr1G005420.4	Barley	mitochondrion	64.53	62.8
PGSC0003DMT400047562	Potato	mitochondrion	53.21	62.37
HORVU2Hr1G101990.1	Barley	plastid	66.06	62.25
Bra031351.1-P	Field mustard	mitochondrion	68.5	62.22
CDY37409	Canola	mitochondrion	68.2	61.94
CDY10636	Canola	mitochondrion	68.2	61.94
VIT_02s0033g01400.t01	Wine grape	mitochondrion	60.55	61.88
AT3G22370.1	Thale cress	mitochondrion	66.67	61.58
VIT_02s0033g01380.t01	Wine grape	mitochondrion	59.33	60.25
PGSC0003DMT400019708	Potato	mitochondrion	64.83	59.55
PGSC0003DMT400019707	Potato	mitochondrion	58.41	59.5
Solyc08g075540.2.1	Tomato	plastid	65.14	59.5
Solyc08g075550.2.1	Tomato	mitochondrion	57.19	58.8
TraesCS6D01G245800.1	Wheat	mitochondrion	70.64	58.48
TraesCS6A01G269100.1	Wheat	mitochondrion	70.95	58.44
CDY53287	Canola	mitochondrion	56.27	57.68
Bra010153.1-P	Field mustard	mitochondrion	56.27	57.68
AT1G32350.1	Thale cress	mitochondrion	55.96	57.55
Solyc08g005550.2.1	Tomato	mitochondrion, plastid	63.91	57.1
CDY68662	Canola	mitochondrion	55.66	57.05
HORVU2Hr1G101920.2	Barley	cytosol	46.18	52.61
TraesCS4B01G272200.1	Wheat	cytosol, mitochondrion	12.84	51.22
TraesCS7B01G356600.1	Wheat	mitochondrion	16.21	49.07

Protein Annotations

Gene3D:1.20.1260.140	MapMan:2.4.2.2	InterPro:AOX	InterPro:AOX_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009916	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	GO:GO:0070469	GO:GO:0102721
EnsemblPlantsGene:GSMUA_Achr1G27800_001	EnsemblPlants:GSMUA_Achr1P27800_001	EnsemblPlants:GSMUA_Achr1T27800_001	InterPro:IPR038659	UniProt:M0S3N7	PFAM:PF01786
PANTHER:PTHR31803	PANTHER:PTHR31803:SF17	UniParc:UPI000296227D	SEG:seg	:	:

Description

Alternative oxidase 1a, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr1G27800_001]

Coordinates

chr1:-:26240910..26242367

Molecular Weight (calculated)

36615.1 Da

IEP (calculated)

7.752

GRAVY (calculated)

-0.116

Length

327 amino acids

Sequence
(BLAST)

001: MSSRIAGSTL LRHLGPRLFF SAAAARAPTA GEPACSLLLS GSASLAPARS PAAEGEAKPP AASREATAVP PSERKAVASY WGIQPSKIIK EDGTPWRWSC
101: FMPWETYKAD TSIDLKKHHV PATLLDKLAY WMVKALRVPT DIFFQRRYGC RAMMLETVAA VPGMVGGMFL HLRSLRRFEQ SGGWIRALLE EAENERMHLM
201: TFMEVAQPRW YERALVIAVQ GVFFNAYFLG YLVSPKFAHR VTGYLEEEAI HSYTEFLRDL EAGEIDNVPA PAIAIDYWRL PADATLKDVV MVVRADEAHH
301: RDVNHFASDI HYRGMELKDI PAPLGYH

Best Arabidopsis Sequence Match ( AT3G22370.1 )
(BLAST)

001: MMITRGGAKA AKSLLVAAGP RLFSTVRTVS SHEALSASHI LKPGVTSAWI WTRAPTIGGM RFASTITLGE KTPMKEEDAN QKKTENESTG GDAAGGNNKG
101: DKGIASYWGV EPNKITKEDG SEWKWNCFRP WETYKADITI DLKKHHVPTT FLDRIAYWTV KSLRWPTDLF FQRRYGCRAM MLETVAAVPG MVGGMLLHCK
201: SLRRFEQSGG WIKALLEEAE NERMHLMTFM EVAKPKWYER ALVITVQGVF FNAYFLGYLI SPKFAHRMVG YLEEEAIHSY TEFLKELDKG NIENVPAPAI
301: AIDYWRLPAD ATLRDVVMVV RADEAHHRDV NHFASDIHYQ GRELKEAPAP IGYH

Arabidopsis Description

AOX1AUbiquinol oxidase 1a, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q39219]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.