Factsheet for GSMUA_Achr6P01170_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P03810_001	Banana	mitochondrion	70.43	71.3
GSMUA_Achr6P01300_001	Banana	mitochondrion	67.38	69.72
GSMUA_Achr1P27800_001	Banana	mitochondrion	68.9	69.11
GSMUA_Achr1P27810_001	Banana	mitochondrion	65.55	68.91
CDY46328	Canola	mitochondrion	64.94	65.94
Bra023835.1-P	Field mustard	mitochondrion	64.94	65.74
CDY34257	Canola	mitochondrion	64.63	65.63
KRH62683	Soybean	mitochondrion	64.02	65.42
VIT_02s0033g01400.t01	Wine grape	mitochondrion	62.8	64.38
CDY69421	Canola	mitochondrion	67.68	64.16
Bra001865.1-P	Field mustard	mitochondrion	67.68	64.16
AT3G22360.1	Thale cress	mitochondrion	63.11	63.69
TraesCS3B01G087900.1	Wheat	mitochondrion	50.0	62.84
AT3G22370.1	Thale cress	mitochondrion	67.07	62.15
CDX92940	Canola	mitochondrion	67.07	62.15
AT3G27620.1	Thale cress	mitochondrion	61.89	61.7
PGSC0003DMT400047562	Potato	mitochondrion	52.13	61.29
Bra031351.1-P	Field mustard	mitochondrion	66.77	60.83
CDY37409	Canola	mitochondrion	66.46	60.56
CDY10636	Canola	mitochondrion	66.46	60.56
Solyc08g075550.2.1	Tomato	mitochondrion	58.23	60.06
Os02t0318100-00	Rice	mitochondrion	64.63	60.06
PGSC0003DMT400019707	Potato	mitochondrion	58.54	59.81
AT1G32350.1	Thale cress	mitochondrion	57.93	59.75
CDY68662	Canola	mitochondrion	57.62	59.25
CDY53287	Canola	mitochondrion	57.32	58.93
Bra010153.1-P	Field mustard	mitochondrion	57.32	58.93
PGSC0003DMT400019708	Potato	mitochondrion	63.11	58.15
Solyc08g075540.2.1	Tomato	plastid	62.8	57.54
VIT_02s0033g01380.t01	Wine grape	mitochondrion	55.79	56.83
Solyc08g005550.2.1	Tomato	mitochondrion, plastid	60.67	54.37

Protein Annotations

Gene3D:1.20.1260.140	MapMan:2.4.2.2	InterPro:AOX	InterPro:AOX_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009916	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	GO:GO:0070469	GO:GO:0102721
EnsemblPlantsGene:GSMUA_Achr6G01170_001	EnsemblPlants:GSMUA_Achr6P01170_001	EnsemblPlants:GSMUA_Achr6T01170_001	InterPro:IPR038659	UniProt:M0T365	PFAM:PF01786
PANTHER:PTHR31803	PANTHER:PTHR31803:SF8	UniParc:UPI0002959C7A	SEG:seg	:	:

Description

Alternative oxidase 1a, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr6G01170_001]

Coordinates

chr6:-:776736..777960

Molecular Weight (calculated)

36776.0 Da

IEP (calculated)

8.463

GRAVY (calculated)

-0.168

Length

328 amino acids

Sequence
(BLAST)

001: MNRRVAAAAA LRQLGPRLFS TAAISRSAAG GTWEPTLGVS PLALSRFLST AASIGGEGAD ERAGAIASAS TKREEKALAS YWGVAPPRLF KKDGTEWRWT
101: CFKPWDTYSS NVSIDLHKHH VPTTWGDKCA RWLVKSLRVP TDIFFQRRYG CRAMMLETVA AVPGMVGGML LHLRSLRHFE HSGGWIRALL EEAENERMHL
201: MTFMEVSQPR WYERALVFAV QGVFFNAYFA AYLLSPKLAH RMVGYLEEEA IHSYTEFLKD LEAGKIENVP APAIAIDYWR LPADATLKDV VTVVRADEAH
301: HRDVNHFASD IHYEGHALRE LPAPVGYH

Best Arabidopsis Sequence Match ( AT3G22370.1 )
(BLAST)

001: MMITRGGAKA AKSLLVAAGP RLFSTVRTVS SHEALSASHI LKPGVTSAWI WTRAPTIGGM RFASTITLGE KTPMKEEDAN QKKTENESTG GDAAGGNNKG
101: DKGIASYWGV EPNKITKEDG SEWKWNCFRP WETYKADITI DLKKHHVPTT FLDRIAYWTV KSLRWPTDLF FQRRYGCRAM MLETVAAVPG MVGGMLLHCK
201: SLRRFEQSGG WIKALLEEAE NERMHLMTFM EVAKPKWYER ALVITVQGVF FNAYFLGYLI SPKFAHRMVG YLEEEAIHSY TEFLKELDKG NIENVPAPAI
301: AIDYWRLPAD ATLRDVVMVV RADEAHHRDV NHFASDIHYQ GRELKEAPAP IGYH

Arabidopsis Description

AOX1AUbiquinol oxidase 1a, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q39219]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.