Factsheet for Solyc08g005550.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400047562	Potato	mitochondrion	61.2	80.29
Bra023835.1-P	Field mustard	mitochondrion	59.84	67.59
CDY46328	Canola	mitochondrion	59.56	67.49
CDY34257	Canola	mitochondrion	59.56	67.49
KRH62683	Soybean	mitochondrion	58.2	66.36
AT3G22360.1	Thale cress	mitochondrion	58.74	66.15
GSMUA_Achr6P01300_001	Banana	mitochondrion	56.83	65.62
HORVU6Hr1G068150.6	Barley	cytosol, peroxisome	48.91	65.33
GSMUA_Achr1P27810_001	Banana	mitochondrion	55.19	64.74
Solyc08g075540.2.1	Tomato	plastid	62.57	63.97
GSMUA_Achr1P27800_001	Banana	mitochondrion	57.1	63.91
Bra001865.1-P	Field mustard	mitochondrion	60.38	63.87
AT3G27620.1	Thale cress	mitochondrion	57.38	63.83
GSMUA_Achr5P03810_001	Banana	mitochondrion	56.28	63.58
CDY69421	Canola	mitochondrion	59.84	63.29
EES12782	Sorghum	mitochondrion	53.83	62.74
CDY10636	Canola	mitochondrion	61.48	62.5
Bra031351.1-P	Field mustard	mitochondrion	61.48	62.5
CDY37409	Canola	mitochondrion	61.48	62.5
VIT_02s0033g01400.t01	Wine grape	mitochondrion	54.64	62.5
AT3G22370.1	Thale cress	mitochondrion	59.56	61.58
CDX92940	Canola	mitochondrion	59.56	61.58
Solyc08g075550.2.1	Tomato	mitochondrion	53.01	61.01
GSMUA_Achr6P01170_001	Banana	mitochondrion	54.37	60.67
Os04t0600200-01	Rice	golgi	54.92	60.54
Zm00001d002436_P001	Maize	extracellular, plasma membrane	54.1	60.18
TraesCS2A01G439400.1	Wheat	mitochondrion	53.55	59.76
EES12781	Sorghum	mitochondrion	53.83	59.52
Zm00001d002435_P001	Maize	mitochondrion	53.01	58.97
TraesCS2B01G459300.1	Wheat	mitochondrion	53.01	58.97
EES12783	Sorghum	mitochondrion	53.28	58.73
TraesCS6B01G296400.1	Wheat	mitochondrion	54.37	58.53
TraesCS2D01G436700.1	Wheat	mitochondrion	53.55	58.33
Os02t0700400-01	Rice	mitochondrion	54.37	57.68
Zm00001d017727_P001	Maize	extracellular	54.64	57.64
EES05672	Sorghum	mitochondrion	54.37	57.51
Solyc01g105220.2.1	Tomato	mitochondrion	54.64	57.47
Os04t0600300-01	Rice	mitochondrion	51.64	56.42
TraesCS2D01G436200.1	Wheat	mitochondrion	50.0	56.13
TraesCS2B01G459100.1	Wheat	mitochondrion	50.27	55.76
TraesCS2B01G459000.1	Wheat	mitochondrion	50.0	55.62
TraesCS2A01G438200.1	Wheat	mitochondrion	50.0	55.45
TraesCS2A01G438300.1	Wheat	mitochondrion	49.45	55.02
TraesCS2A01G439100.1	Wheat	mitochondrion	49.45	55.02
TraesCS2D01G436100.1	Wheat	mitochondrion	49.18	54.88
HORVU0Hr1G005420.4	Barley	mitochondrion	49.73	54.17
Zm00001d002434_P001	Maize	mitochondrion	48.91	53.92
HORVU2Hr1G101990.1	Barley	plastid	50.27	53.03
TraesCS3B01G087900.1	Wheat	mitochondrion	37.7	52.87
Os02t0318100-00	Rice	mitochondrion	50.55	52.41
TraesCS4B01G272200.1	Wheat	cytosol, mitochondrion	11.48	51.22
TraesCS6A01G269100.1	Wheat	mitochondrion	54.1	49.87
TraesCS6D01G245800.1	Wheat	mitochondrion	53.55	49.62
HORVU2Hr1G101920.2	Barley	cytosol	37.16	47.39
TraesCS7B01G356600.1	Wheat	mitochondrion	13.39	45.37

Protein Annotations

Gene3D:1.20.1260.140	MapMan:2.4.2.2	InterPro:AOX	InterPro:AOX_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009916	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	GO:GO:0070469	GO:GO:0102721
InterPro:IPR038659	UniProt:K4CI46	PFAM:PF01786	PIRSF:PIRSF005229	PANTHER:PTHR31803	PANTHER:PTHR31803:SF18
EnsemblPlantsGene:Solyc08g005550.2	EnsemblPlants:Solyc08g005550.2.1	UniParc:UPI000276BA64	SEG:seg	:	:

Description

Ubiquinol oxidase [Source:UniProtKB/TrEMBL;Acc:K4CI46]

Coordinates

chr8:+:408345..410739

Molecular Weight (calculated)

42119.8 Da

IEP (calculated)

7.965

GRAVY (calculated)

-0.336

Length

366 amino acids

Sequence
(BLAST)

001: MIIRGALRLA RSMMSHIGPR YYSTIRPVAG NEAKNGVITR ASFNFLHENS IKGFEKIMMT RVRYFSTTNS CNTSIINLSD KEKNEQTSQE KIDQNGDAEF
101: KVTVLTSGGN NNNINNVSYW GIQPPKVTKE DGTPWKWNCF MPWETYKADL SIDMKKHHEP ITLLDKLAYW TVKALRVPTD LFFQKRYGCR AMMLETVAAV
201: PGMVGGMLLH CKSLRRFEHS GGWIKALLEE AENERMHLMT FMEVSKPKWY ERGLVLMVQG IFFNVYFMTY ILSPKLAHRI VGYLEEEAIH SYTQFLKELD
301: EGNIENVAAP AIAIDYWRLT QDATLKDVVM VVRADEAHHR DVNHFASDIY YHGQELKDCP APLGYH

Best Arabidopsis Sequence Match ( AT3G22370.1 )
(BLAST)

001: MMITRGGAKA AKSLLVAAGP RLFSTVRTVS SHEALSASHI LKPGVTSAWI WTRAPTIGGM RFASTITLGE KTPMKEEDAN QKKTENESTG GDAAGGNNKG
101: DKGIASYWGV EPNKITKEDG SEWKWNCFRP WETYKADITI DLKKHHVPTT FLDRIAYWTV KSLRWPTDLF FQRRYGCRAM MLETVAAVPG MVGGMLLHCK
201: SLRRFEQSGG WIKALLEEAE NERMHLMTFM EVAKPKWYER ALVITVQGVF FNAYFLGYLI SPKFAHRMVG YLEEEAIHSY TEFLKELDKG NIENVPAPAI
301: AIDYWRLPAD ATLRDVVMVV RADEAHHRDV NHFASDIHYQ GRELKEAPAP IGYH

Arabidopsis Description

AOX1AUbiquinol oxidase 1a, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q39219]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.