Factsheet for TraesCS6A01G269100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G296400.1	Wheat	mitochondrion	77.08	90.0
HORVU6Hr1G068150.6	Barley	cytosol, peroxisome	61.21	88.69
TraesCS6D01G245800.1	Wheat	mitochondrion	78.09	78.48
Zm00001d017727_P001	Maize	extracellular	64.99	74.35
EES05672	Sorghum	mitochondrion	64.74	74.28
Os02t0700400-01	Rice	mitochondrion	63.73	73.33
TraesCS2A01G439400.1	Wheat	mitochondrion	59.95	72.56
GSMUA_Achr6P01300_001	Banana	mitochondrion	57.93	72.56
GSMUA_Achr1P27810_001	Banana	mitochondrion	56.42	71.79
GSMUA_Achr1P27800_001	Banana	mitochondrion	58.44	70.95
TraesCS2A01G438300.1	Wheat	mitochondrion	53.4	64.44
TraesCS2A01G438200.1	Wheat	mitochondrion	53.4	64.24
CDY34257	Canola	mitochondrion	51.89	63.78
KRH62683	Soybean	mitochondrion	51.39	63.55
CDY46328	Canola	mitochondrion	51.64	63.47
AT3G22360.1	Thale cress	mitochondrion	51.89	63.38
Bra023835.1-P	Field mustard	mitochondrion	51.64	63.27
TraesCS2A01G439100.1	Wheat	mitochondrion	52.39	63.22
CDY69421	Canola	mitochondrion	53.65	61.56
AT3G27620.1	Thale cress	mitochondrion	50.88	61.4
Bra001865.1-P	Field mustard	mitochondrion	53.15	60.98
PGSC0003DMT400047562	Potato	mitochondrion	42.57	60.57
CDY10636	Canola	mitochondrion	54.66	60.28
Bra031351.1-P	Field mustard	mitochondrion	54.66	60.28
CDY37409	Canola	mitochondrion	54.41	60.0
VIT_02s0033g01400.t01	Wine grape	mitochondrion	47.86	59.38
PGSC0003DMT400019707	Potato	mitochondrion	47.86	59.19
AT3G22370.1	Thale cress	mitochondrion	52.39	58.76
CDX92940	Canola	mitochondrion	52.39	58.76
PGSC0003DMT400019708	Potato	mitochondrion	52.64	58.71
Solyc08g075550.2.1	Tomato	mitochondrion	46.6	58.18
Solyc08g075540.2.1	Tomato	plastid	52.39	58.1
Bra010153.1-P	Field mustard	mitochondrion	46.6	57.99
CDY53287	Canola	mitochondrion	46.6	57.99
VIT_02s0033g01380.t01	Wine grape	mitochondrion	46.85	57.76
CDY68662	Canola	mitochondrion	46.35	57.68
AT1G32350.1	Thale cress	mitochondrion	45.09	56.29
Solyc08g005550.2.1	Tomato	mitochondrion, plastid	49.87	54.1

Protein Annotations

EnsemblPlants:TraesCS6A01G269100.1	EnsemblPlantsGene:TraesCS6A01G269100	Gene3D:1.20.1260.140	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009916	GO:GO:0055114	InterPro:AOX	InterPro:AOX_sf	InterPro:IPR038659
PANTHER:PTHR31803	PANTHER:PTHR31803:SF17	PFAM:PF01786	PIRSF:PIRSF005229	SEG:seg	TIGR:cd01053
MapMan:2.4.2.2	:	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:495464128..495465604

Molecular Weight (calculated)

43709.3 Da

IEP (calculated)

9.797

GRAVY (calculated)

-0.177

Length

397 amino acids

Sequence
(BLAST)

001: MPSWRALARR QRHVIPSPSQ SLARPQVLEP ATTSFASRAA AHQAGSSSSA MSSRVAGSVL LRHLGPRVFG PTTPAAQRPL LAGGEGGAVA VAMWARPLST
101: SAAEAAREEA TASKDNVAST AAATAEAMQA AKADAVQAAK EGKSPAASSY WGIVPAKLVN KDGAEWKWSC FRPWEAYTSD TTIDLSKHHK PKVLLDKIAY
201: WTVKSLRVPT DIFFQRRYGC RAMMLETVAA VPGMVGGMLL HLRSLRRFEQ SGGWIRALLE EAENERMHLM TFMEVANPKW YERALVLAVQ GVFFNAYFLG
301: YIVSPKFAHR VVGYLEEEAI HSYTEFLRDL EAGRIENVPA PRIAIDYWRL PADARLKDVV TVVRADEAHH RDVNHFAADI HFQGLELNKT PAPLGYH

Best Arabidopsis Sequence Match ( AT3G22370.1 )
(BLAST)

001: MMITRGGAKA AKSLLVAAGP RLFSTVRTVS SHEALSASHI LKPGVTSAWI WTRAPTIGGM RFASTITLGE KTPMKEEDAN QKKTENESTG GDAAGGNNKG
101: DKGIASYWGV EPNKITKEDG SEWKWNCFRP WETYKADITI DLKKHHVPTT FLDRIAYWTV KSLRWPTDLF FQRRYGCRAM MLETVAAVPG MVGGMLLHCK
201: SLRRFEQSGG WIKALLEEAE NERMHLMTFM EVAKPKWYER ALVITVQGVF FNAYFLGYLI SPKFAHRMVG YLEEEAIHSY TEFLKELDKG NIENVPAPAI
301: AIDYWRLPAD ATLRDVVMVV RADEAHHRDV NHFASDIHYQ GRELKEAPAP IGYH

Arabidopsis Description

AOX1AUbiquinol oxidase 1a, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q39219]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.