Factsheet for Solyc08g075540.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
plastid 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

plastid: 20363867
plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400019708	Potato	mitochondrion	97.21	97.75
CDY46328	Canola	mitochondrion	64.8	71.83
CDY34257	Canola	mitochondrion	64.53	71.52
Bra023835.1-P	Field mustard	mitochondrion	64.53	71.3
KRH62683	Soybean	mitochondrion	63.13	70.41
GSMUA_Achr5P03810_001	Banana	mitochondrion	62.29	68.83
AT3G22360.1	Thale cress	mitochondrion	61.73	68.0
HORVU6Hr1G068150.6	Barley	cytosol, peroxisome	51.68	67.52
Bra001865.1-P	Field mustard	mitochondrion	65.08	67.34
CDY69421	Canola	mitochondrion	65.08	67.34
VIT_02s0033g01400.t01	Wine grape	mitochondrion	59.5	66.56
GSMUA_Achr6P01300_001	Banana	mitochondrion	58.94	66.56
CDY10636	Canola	mitochondrion	66.2	65.83
CDY37409	Canola	mitochondrion	65.92	65.56
GSMUA_Achr1P27810_001	Banana	mitochondrion	56.98	65.38
Bra031351.1-P	Field mustard	mitochondrion	65.64	65.28
GSMUA_Achr1P27800_001	Banana	mitochondrion	59.5	65.14
AT3G27620.1	Thale cress	mitochondrion	59.78	65.05
CDX92940	Canola	mitochondrion	64.25	64.97
TraesCS2B01G459300.1	Wheat	mitochondrion	59.22	64.44
TraesCS2A01G439400.1	Wheat	mitochondrion	58.94	64.33
EES12781	Sorghum	mitochondrion	59.22	64.05
AT3G22370.1	Thale cress	mitochondrion	63.13	63.84
Zm00001d002436_P001	Maize	extracellular, plasma membrane	58.66	63.83
EES12782	Sorghum	mitochondrion	55.87	63.69
TraesCS2D01G436700.1	Wheat	mitochondrion	59.78	63.69
Os04t0600200-01	Rice	golgi	58.66	63.25
Solyc08g075550.2.1	Tomato	mitochondrion	56.15	63.21
GSMUA_Achr6P01170_001	Banana	mitochondrion	57.54	62.8
TraesCS6B01G296400.1	Wheat	mitochondrion	59.5	62.65
Solyc08g005550.2.1	Tomato	mitochondrion, plastid	63.97	62.57
EES05672	Sorghum	mitochondrion	59.5	61.56
Zm00001d002435_P001	Maize	mitochondrion	56.42	61.4
Zm00001d017727_P001	Maize	extracellular	58.94	60.81
Os02t0700400-01	Rice	mitochondrion	58.1	60.29
TraesCS2D01G436200.1	Wheat	mitochondrion	54.47	59.82
EES12783	Sorghum	mitochondrion	55.31	59.64
Os04t0600300-01	Rice	mitochondrion	55.03	58.81
TraesCS2B01G459100.1	Wheat	mitochondrion	54.19	58.79
TraesCS2B01G459000.1	Wheat	mitochondrion	53.91	58.66
TraesCS2A01G438200.1	Wheat	mitochondrion	53.91	58.48
TraesCS3B01G087900.1	Wheat	mitochondrion	42.18	57.85
TraesCS2A01G438300.1	Wheat	mitochondrion	53.07	57.75
TraesCS2A01G439100.1	Wheat	mitochondrion	52.79	57.45
TraesCS2D01G436100.1	Wheat	mitochondrion	52.51	57.32
HORVU0Hr1G005420.4	Barley	mitochondrion	53.07	56.55
HORVU2Hr1G101990.1	Barley	plastid	54.19	55.91
Solyc01g105220.2.1	Tomato	mitochondrion	54.19	55.75
Zm00001d002434_P001	Maize	mitochondrion	51.68	55.72
Os02t0318100-00	Rice	mitochondrion	53.35	54.11
TraesCS4B01G272200.1	Wheat	cytosol, mitochondrion	12.29	53.66
TraesCS6D01G245800.1	Wheat	mitochondrion	58.94	53.42
TraesCS6A01G269100.1	Wheat	mitochondrion	58.1	52.39
HORVU2Hr1G101920.2	Barley	cytosol	40.22	50.17
TraesCS7B01G356600.1	Wheat	mitochondrion	14.53	48.15

Protein Annotations

Gene3D:1.20.1260.140	MapMan:2.4.2.2	InterPro:AOX	InterPro:AOX_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009916	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	GO:GO:0070469	GO:GO:0102721
InterPro:IPR038659	UniProt:K4CMS1	PFAM:PF01786	PIRSF:PIRSF005229	PANTHER:PTHR31803	PANTHER:PTHR31803:SF18
EnsemblPlantsGene:Solyc08g075540.2	EnsemblPlants:Solyc08g075540.2.1	UniParc:UPI000276B6EF	SEG:seg	:	:

Description

Ubiquinol oxidase [Source:UniProtKB/TrEMBL;Acc:K4CMS1]

Coordinates

chr8:-:59711798..59713604

Molecular Weight (calculated)

40062.0 Da

IEP (calculated)

8.701

GRAVY (calculated)

-0.248

Length

358 amino acids

Sequence
(BLAST)

001: MMTRGATRMT RVVMGHMGPR YFSTTVLRNN PGTGVVGGVA AGLLHGFPAN PSEKVAVTWV RHFSAMGSRS ASTAALNDKQ QEKESSDKKV ENTATATAAV
101: NGGVGKSVVS YWGVPPSKAT KPDGTEWKWN CFRPWETYEA DMSIDLTKHH APVTFLDKFA YWTVKILRFP TDVFFQRRYG CRAMMLETVA AVPGMVGGML
201: LHCKSLRRFE QSGGWIKALL EEAENERMHL MTFMEVAKPN VYERALVFAV QGVFFNAYFA AYLISPKLAH RIVGYLEEEA VHSYTEFLKE LDNGNIENVP
301: APAIAIDYWR LPKDATLRDV VLVVRADEAH HRDVNHYASD IHYQGQQLKD SPAPLGYH

Best Arabidopsis Sequence Match ( AT3G22370.1 )
(BLAST)

001: MMITRGGAKA AKSLLVAAGP RLFSTVRTVS SHEALSASHI LKPGVTSAWI WTRAPTIGGM RFASTITLGE KTPMKEEDAN QKKTENESTG GDAAGGNNKG
101: DKGIASYWGV EPNKITKEDG SEWKWNCFRP WETYKADITI DLKKHHVPTT FLDRIAYWTV KSLRWPTDLF FQRRYGCRAM MLETVAAVPG MVGGMLLHCK
201: SLRRFEQSGG WIKALLEEAE NERMHLMTFM EVAKPKWYER ALVITVQGVF FNAYFLGYLI SPKFAHRMVG YLEEEAIHSY TEFLKELDKG NIENVPAPAI
301: AIDYWRLPAD ATLRDVVMVV RADEAHHRDV NHFASDIHYQ GRELKEAPAP IGYH

Arabidopsis Description

AOX1AUbiquinol oxidase 1a, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q39219]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.