Factsheet for GSMUA_Achr1P27810_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P27800_001	Banana	mitochondrion	86.86	82.87
GSMUA_Achr6P01300_001	Banana	mitochondrion	80.77	79.5
GSMUA_Achr5P03810_001	Banana	mitochondrion	76.92	74.07
HORVU6Hr1G068150.6	Barley	cytosol, peroxisome	62.5	71.17
Os04t0600200-01	Rice	golgi	74.04	69.58
EES12782	Sorghum	mitochondrion	69.23	68.79
Zm00001d002436_P001	Maize	extracellular, plasma membrane	71.79	68.09
Zm00001d002435_P001	Maize	mitochondrion	70.51	66.87
CDY46328	Canola	mitochondrion	68.91	66.56
Bra023835.1-P	Field mustard	mitochondrion	68.91	66.36
EES12781	Sorghum	mitochondrion	70.19	66.16
CDY34257	Canola	mitochondrion	68.27	65.94
TraesCS6B01G296400.1	Wheat	mitochondrion	71.79	65.88
TraesCS2A01G439400.1	Wheat	mitochondrion	69.23	65.85
TraesCS2B01G459300.1	Wheat	mitochondrion	69.23	65.65
GSMUA_Achr6P01170_001	Banana	mitochondrion	68.91	65.55
TraesCS2D01G436700.1	Wheat	mitochondrion	69.55	64.58
EES12783	Sorghum	mitochondrion	68.59	64.46
EES05672	Sorghum	mitochondrion	71.47	64.45
AT3G22360.1	Thale cress	mitochondrion	66.67	64.0
Zm00001d017727_P001	Maize	extracellular	71.15	63.98
TraesCS2B01G459100.1	Wheat	mitochondrion	67.63	63.94
Os04t0600300-01	Rice	mitochondrion	68.59	63.88
KRH62683	Soybean	mitochondrion	65.38	63.55
TraesCS2D01G436100.1	Wheat	mitochondrion	66.67	63.41
TraesCS2A01G438300.1	Wheat	mitochondrion	66.67	63.22
Os02t0700400-01	Rice	mitochondrion	69.87	63.19
AT3G27620.1	Thale cress	mitochondrion	66.35	62.92
TraesCS2B01G459000.1	Wheat	mitochondrion	66.03	62.61
TraesCS2A01G438200.1	Wheat	mitochondrion	66.03	62.42
TraesCS2A01G439100.1	Wheat	mitochondrion	65.71	62.31
Bra001865.1-P	Field mustard	mitochondrion	68.91	62.14
TraesCS2D01G436200.1	Wheat	mitochondrion	64.74	61.96
CDY69421	Canola	mitochondrion	68.27	61.56
HORVU0Hr1G005420.4	Barley	mitochondrion	66.03	61.31
Zm00001d002434_P001	Maize	mitochondrion	65.06	61.14
AT3G22370.1	Thale cress	mitochondrion	69.23	61.02
CDY10636	Canola	mitochondrion	70.19	60.83
HORVU2Hr1G101990.1	Barley	plastid	67.63	60.81
VIT_02s0033g01400.t01	Wine grape	mitochondrion	61.86	60.31
Bra031351.1-P	Field mustard	mitochondrion	69.55	60.28
CDY37409	Canola	mitochondrion	69.23	60.0
CDX92940	Canola	mitochondrion	67.95	59.89
PGSC0003DMT400047562	Potato	mitochondrion	53.53	59.86
VIT_02s0033g01380.t01	Wine grape	mitochondrion	59.94	58.07
Solyc08g075550.2.1	Tomato	mitochondrion	58.65	57.55
PGSC0003DMT400019708	Potato	mitochondrion	65.38	57.3
Bra010153.1-P	Field mustard	mitochondrion	58.33	57.05
CDY53287	Canola	mitochondrion	58.33	57.05
PGSC0003DMT400019707	Potato	mitochondrion	58.65	57.01
Solyc08g075540.2.1	Tomato	plastid	65.38	56.98
CDY68662	Canola	mitochondrion	58.01	56.74
TraesCS6A01G269100.1	Wheat	mitochondrion	71.79	56.42
TraesCS6D01G245800.1	Wheat	mitochondrion	70.51	55.7
AT1G32350.1	Thale cress	mitochondrion	56.73	55.66
Solyc08g005550.2.1	Tomato	mitochondrion, plastid	64.74	55.19
TraesCS4B01G272200.1	Wheat	cytosol, mitochondrion	13.46	51.22
HORVU2Hr1G101920.2	Barley	cytosol	46.79	50.87
TraesCS7B01G356600.1	Wheat	mitochondrion	16.99	49.07

Protein Annotations

Gene3D:1.20.1260.140	MapMan:2.4.2.2	InterPro:AOX	InterPro:AOX_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009916	GO:GO:0016020
GO:GO:0016021	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	GO:GO:0070469	GO:GO:0102721
EnsemblPlantsGene:GSMUA_Achr1G27810_001	EnsemblPlants:GSMUA_Achr1P27810_001	EnsemblPlants:GSMUA_Achr1T27810_001	InterPro:IPR038659	UniProt:M0S3N8	PFAM:PF01786
PANTHER:PTHR31803	PANTHER:PTHR31803:SF17	UniParc:UPI0002953389	SEG:seg	:	:

Description

transposon protein, putative, unclassified, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G27810_001]

Coordinates

chr1:-:26285395..26286838

Molecular Weight (calculated)

35120.5 Da

IEP (calculated)

8.113

GRAVY (calculated)

-0.121

Length

312 amino acids

Sequence
(BLAST)

001: MSSRMAGSTL LRHLGPRLFF SAAAGEPACS LLLSGSASLA PARSPAAAKP SAASREPTAV PPSERKAVAS YWGIQPSKII KEDGTPWRWS CFMPWETYKA
101: DTSIDLKKHH VPATLLDKLA YWMVKALRVP TDIFFQRRYG CRAMMLETVA AVPGMVGGML LHLRSLRRFE QSGGWIRSLL EEAENERMHL MTFMEVAQPR
201: WYERALVIAV QGVFFNAYFL GYLVSPRFAH RVTGYLEEEA IHSYTEFLRD LEAGEIDNVP APAIAIDYWR LPADATLKDV VMVVRADEAH HRDDIHYRGM
301: ELKDIPAPLG YH

Best Arabidopsis Sequence Match ( AT3G22370.1 )
(BLAST)

001: MMITRGGAKA AKSLLVAAGP RLFSTVRTVS SHEALSASHI LKPGVTSAWI WTRAPTIGGM RFASTITLGE KTPMKEEDAN QKKTENESTG GDAAGGNNKG
101: DKGIASYWGV EPNKITKEDG SEWKWNCFRP WETYKADITI DLKKHHVPTT FLDRIAYWTV KSLRWPTDLF FQRRYGCRAM MLETVAAVPG MVGGMLLHCK
201: SLRRFEQSGG WIKALLEEAE NERMHLMTFM EVAKPKWYER ALVITVQGVF FNAYFLGYLI SPKFAHRMVG YLEEEAIHSY TEFLKELDKG NIENVPAPAI
301: AIDYWRLPAD ATLRDVVMVV RADEAHHRDV NHFASDIHYQ GRELKEAPAP IGYH

Arabidopsis Description

AOX1AUbiquinol oxidase 1a, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q39219]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.