Factsheet for TraesCS6B01G296400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G068150.6	Barley	cytosol, peroxisome	69.71	86.5
TraesCS6A01G269100.1	Wheat	mitochondrion	90.0	77.08
TraesCS6D01G245800.1	Wheat	mitochondrion	87.94	75.7
Os02t0700400-01	Rice	mitochondrion	76.47	75.36
Zm00001d017727_P001	Maize	extracellular	76.18	74.64
EES05672	Sorghum	mitochondrion	75.59	74.28
GSMUA_Achr6P01300_001	Banana	mitochondrion	67.06	71.92
GSMUA_Achr1P27810_001	Banana	mitochondrion	65.88	71.79
TraesCS2B01G459300.1	Wheat	mitochondrion	69.12	71.43
GSMUA_Achr1P27800_001	Banana	mitochondrion	68.53	71.25
TraesCS2B01G459100.1	Wheat	mitochondrion	63.82	65.76
CDY34257	Canola	mitochondrion	61.18	64.4
CDY46328	Canola	mitochondrion	61.18	64.4
Bra023835.1-P	Field mustard	mitochondrion	60.88	63.89
AT3G22360.1	Thale cress	mitochondrion	60.88	63.69
KRH62683	Soybean	mitochondrion	60.0	63.55
TraesCS2B01G459000.1	Wheat	mitochondrion	61.47	63.53
TraesCS4B01G272200.1	Wheat	cytosol, mitochondrion	15.0	62.2
PGSC0003DMT400047562	Potato	mitochondrion	50.59	61.65
AT3G27620.1	Thale cress	mitochondrion	59.41	61.4
CDY69421	Canola	mitochondrion	62.35	61.27
Bra031351.1-P	Field mustard	mitochondrion	64.71	61.11
Bra001865.1-P	Field mustard	mitochondrion	62.06	60.98
CDY37409	Canola	mitochondrion	64.41	60.83
VIT_02s0033g01400.t01	Wine grape	mitochondrion	57.06	60.62
AT3G22370.1	Thale cress	mitochondrion	62.35	59.89
PGSC0003DMT400019708	Potato	mitochondrion	62.65	59.83
CDY10636	Canola	mitochondrion	63.24	59.72
Solyc08g075540.2.1	Tomato	plastid	62.65	59.5
CDX92940	Canola	mitochondrion	61.18	58.76
VIT_02s0033g01380.t01	Wine grape	mitochondrion	55.59	58.7
CDY53287	Canola	mitochondrion	55.0	58.62
Bra010153.1-P	Field mustard	mitochondrion	55.0	58.62
PGSC0003DMT400019707	Potato	mitochondrion	55.29	58.57
Solyc08g075550.2.1	Tomato	mitochondrion	54.71	58.49
CDY68662	Canola	mitochondrion	54.71	58.31
AT1G32350.1	Thale cress	mitochondrion	53.24	56.92
TraesCS3B01G087900.1	Wheat	mitochondrion	42.65	55.56
TraesCS7B01G356600.1	Wheat	mitochondrion	17.35	54.63
Solyc08g005550.2.1	Tomato	mitochondrion, plastid	58.53	54.37

Protein Annotations

EnsemblPlants:TraesCS6B01G296400.1	EnsemblPlantsGene:TraesCS6B01G296400	Gene3D:1.20.1260.140	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009916	GO:GO:0055114	InterPro:AOX	InterPro:AOX_sf	InterPro:IPR038659
PANTHER:PTHR31803	PANTHER:PTHR31803:SF17	PFAM:PF01786	PIRSF:PIRSF005229	SEG:seg	TIGR:cd01053
MapMan:2.4.2.2	:	:	:	:	:

Description

No Description!

Coordinates

chr6B:-:532150706..532152010

Molecular Weight (calculated)

37767.4 Da

IEP (calculated)

9.378

GRAVY (calculated)

-0.139

Length

340 amino acids

Sequence
(BLAST)

001: MSSRVAGSVL LRHLGPRVFG PTTPAAQRPL LAGGEGGAVV VWARPLSTSA AEAAREEAAA SKDNVASTAA ATAEAMQAAK AAKEGGKSPV SSYWGIVPAK
101: LVNKDGAEWK WSCFRPWEAY TSDTTIDLTK HHKPKVLLDK IAYWTVKSLR VPTDIFFQRR YGCRAMMLET VAAVPGMVGG MLLHLRSLRR FEQSGGWIRA
201: LLEEAENERM HLMTFMEVAK PKWYERALVL AVQGVFFNAY FLGYIVSPKF AHRVVGYLEE EAIHSYTEFL RDLEAGRIEN VPAPRIAIDY WRLPADARLK
301: DVVTVVRADE AHHRDVNHFA ADIHFQGLEL NKTPAPLGYH

Best Arabidopsis Sequence Match ( AT3G22370.1 )
(BLAST)

001: MMITRGGAKA AKSLLVAAGP RLFSTVRTVS SHEALSASHI LKPGVTSAWI WTRAPTIGGM RFASTITLGE KTPMKEEDAN QKKTENESTG GDAAGGNNKG
101: DKGIASYWGV EPNKITKEDG SEWKWNCFRP WETYKADITI DLKKHHVPTT FLDRIAYWTV KSLRWPTDLF FQRRYGCRAM MLETVAAVPG MVGGMLLHCK
201: SLRRFEQSGG WIKALLEEAE NERMHLMTFM EVAKPKWYER ALVITVQGVF FNAYFLGYLI SPKFAHRMVG YLEEEAIHSY TEFLKELDKG NIENVPAPAI
301: AIDYWRLPAD ATLRDVVMVV RADEAHHRDV NHFASDIHYQ GRELKEAPAP IGYH

Arabidopsis Description

AOX1AUbiquinol oxidase 1a, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q39219]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.