Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 1
- extracellular 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P09810_001 | Banana | cytosol | 76.91 | 76.14 |
| GSMUA_Achr1P24570_001 | Banana | cytosol | 58.87 | 34.43 |
| GSMUA_Achr5P11430_001 | Banana | extracellular, vacuole | 22.8 | 27.72 |
| GSMUA_Achr1P12500_001 | Banana | extracellular, vacuole | 20.49 | 24.96 |
| GSMUA_Achr1P12520_001 | Banana | mitochondrion | 17.89 | 13.54 |
| GSMUA_Achr1P12510_001 | Banana | cytosol | 17.89 | 12.94 |
Protein Annotations
| Gene3D:2.60.120.260 | MapMan:21.2.2.2.4 | Gene3D:3.20.20.80 | InterPro:CenC_carb-bd | InterPro:GH10 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 |
| GO:GO:0016798 | EnsemblPlantsGene:GSMUA_Achr6G30170_001 | EnsemblPlants:GSMUA_Achr6P30170_001 | EnsemblPlants:GSMUA_Achr6T30170_001 | InterPro:Galactose-bd-like_sf | InterPro:Glycoside_hydrolase_SF |
| InterPro:IPR001000 | InterPro:IPR008979 | UniProt:M0TBG2 | PFAM:PF00331 | PFAM:PF02018 | PRINTS:PR00134 |
| PFscan:PS51760 | PANTHER:PTHR31490 | PANTHER:PTHR31490:SF15 | SMART:SM00633 | SUPFAM:SSF49785 | SUPFAM:SSF51445 |
| UniParc:UPI0002955BE1 | SEG:seg | : | : | : | : |
Description
glycosyl hydrolase family 10 protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G30170_001]
Coordinates
chr6:+:30239350..30241805
Molecular Weight (calculated)
76103.2 Da
IEP (calculated)
7.000
GRAVY (calculated)
-0.318
Length
693 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLGGGGGDD ENIILNPAFD DGLNNWSGRG CKIALHDSMS DGKILPLNGG KYFASATGRT QSWNGIEQEI TGRVERKLAY EVAATVRVLG GSTTTADVRV
101: NLYLQGANGR DQYIGVAKSQ ASDKDWVQLQ GKFLLNGAAS RAVIFIEGPP AGTDLLLNSL VVKHAAKMPP PSPPDFQSVV HGVNIIQNSN LVDGSDGLNG
201: WFPLGSCKLT VTSNGAPHVL PPMAKESLGT REPLNGRYIL VTSRTQTWMG AAQAIADKLH LHATYQVSAW VRVGPQRSGP QNIGVSLSVD GKWTSGGQVE
301: AKDGRWYEIG GSFRIEKQPS RVIVSVQGPA SGVDLMVAGL QIFPVDRTKR FKRLKKLTDK VRKRDVVLNI SGSGVDAAAG SSVRVTQIKN SFPLGSCITR
401: TNMDNEDFVD FFVNNFNWAV FGNELKWYWT EPQKGSLNYA DADELLELCR KNGMEARGHC IFWEVESTVQ NWVRSLNKED LSMAVQNRIN GLLTRYKDQF
501: RHYDVNNEML HGSFYRDRLG EDIRSYMFKT ANQLDPSATL FVNDYNVEGA ADTRASPEMY MNQILGLQEQ AAPVGGIGLQ GHVTTPVGPV VSSALDKLSG
601: IMLWGFWELF MFRNNSHLVN AEGDLNEAGK RFLMLKQEWL SHASGKADDQ GEFKFRGFHG TYSVDIITPN EEKLSQTFTV AEGDSALVVN INP
101: NLYLQGANGR DQYIGVAKSQ ASDKDWVQLQ GKFLLNGAAS RAVIFIEGPP AGTDLLLNSL VVKHAAKMPP PSPPDFQSVV HGVNIIQNSN LVDGSDGLNG
201: WFPLGSCKLT VTSNGAPHVL PPMAKESLGT REPLNGRYIL VTSRTQTWMG AAQAIADKLH LHATYQVSAW VRVGPQRSGP QNIGVSLSVD GKWTSGGQVE
301: AKDGRWYEIG GSFRIEKQPS RVIVSVQGPA SGVDLMVAGL QIFPVDRTKR FKRLKKLTDK VRKRDVVLNI SGSGVDAAAG SSVRVTQIKN SFPLGSCITR
401: TNMDNEDFVD FFVNNFNWAV FGNELKWYWT EPQKGSLNYA DADELLELCR KNGMEARGHC IFWEVESTVQ NWVRSLNKED LSMAVQNRIN GLLTRYKDQF
501: RHYDVNNEML HGSFYRDRLG EDIRSYMFKT ANQLDPSATL FVNDYNVEGA ADTRASPEMY MNQILGLQEQ AAPVGGIGLQ GHVTTPVGPV VSSALDKLSG
601: IMLWGFWELF MFRNNSHLVN AEGDLNEAGK RFLMLKQEWL SHASGKADDQ GEFKFRGFHG TYSVDIITPN EEKLSQTFTV AEGDSALVVN INP
001: MKRFTVCCFS NKIHKNGDRN PDKKSRESME VSRKDNEEPE KQNNNNVASI IGSDRTNVIV NHDFSSGMHS WHPNCCEAFV VTAESNVSHG VLDPSKCGSY
101: VVVKNRKETW QGLEQDITNR VKPCSLYKVS ATVAVSGPVH GLVEVMATLK LESQQSQTNY QFIAKTCVFK EKWVRLEGMF SLPSLPEKVV FYLEGPSPGI
201: DLLIQSVTIH RESEPELERV TAEDETIVVN PNFEDGLNNW SGRSCKIVLH DSMADGKIVP ESGKVFASAT ERTQNWNGIQ QEITGKVQRK RVYEATAVVR
301: IYGNNVTTAT VQATLWVQNP NQRDQYIGIS TVQATDKEWI HLKGKFLLNG SASRVVIYIE GPPPGTDILL NSLTVKHAEK IPPSPPPSIE NPAFGVNILT
401: NSHLSDDTTN GWFSLGNCTL SVAEGSPRIL PPMARDSLGA HERLSGRYIL VTNRTQTWMG PAQMITDKLK LFLTYQISVW VKVGSGINSP QNVNVALGID
501: SQWVNGGQVE INDDRWHEIG GSFRIEKNPS KALVYVQGPS SGIDLMVAGL QIFPVDRLAR IKHLKRQCDK IRKRDVILKF AGVDSSKFSG ASVRVRQIRN
601: SFPVGTCISR SNIDNEDFVD FFLKNFNWAV FANELKWYWT EPEQGKLNYQ DADDMLNLCS SNNIETRGHC IFWEVQATVQ QWIQNMNQTD LNNAVQNRLT
701: DLLNRYKGKF KHYDVNNEML HGSFYQDKLG KDIRVNMFKT AHQLDPSATL FVNDYHIEDG CDPKSCPEKY TEQILDLQEK GAPVGGIGIQ GHIDSPVGPI
801: VCSALDKLGI LGLPIWFTEL DVSSVNEHIR ADDLEVMMWE AFGHPAVEGI MLWGFWELFM SRDNSHLVNA EGDVNEAGKR FLAVKKDWLS HANGHIDQNG
901: AFPFRGYSGN YAVEVITTSS SKVLKTFGVD KEDSSQVITV DLQGL
101: VVVKNRKETW QGLEQDITNR VKPCSLYKVS ATVAVSGPVH GLVEVMATLK LESQQSQTNY QFIAKTCVFK EKWVRLEGMF SLPSLPEKVV FYLEGPSPGI
201: DLLIQSVTIH RESEPELERV TAEDETIVVN PNFEDGLNNW SGRSCKIVLH DSMADGKIVP ESGKVFASAT ERTQNWNGIQ QEITGKVQRK RVYEATAVVR
301: IYGNNVTTAT VQATLWVQNP NQRDQYIGIS TVQATDKEWI HLKGKFLLNG SASRVVIYIE GPPPGTDILL NSLTVKHAEK IPPSPPPSIE NPAFGVNILT
401: NSHLSDDTTN GWFSLGNCTL SVAEGSPRIL PPMARDSLGA HERLSGRYIL VTNRTQTWMG PAQMITDKLK LFLTYQISVW VKVGSGINSP QNVNVALGID
501: SQWVNGGQVE INDDRWHEIG GSFRIEKNPS KALVYVQGPS SGIDLMVAGL QIFPVDRLAR IKHLKRQCDK IRKRDVILKF AGVDSSKFSG ASVRVRQIRN
601: SFPVGTCISR SNIDNEDFVD FFLKNFNWAV FANELKWYWT EPEQGKLNYQ DADDMLNLCS SNNIETRGHC IFWEVQATVQ QWIQNMNQTD LNNAVQNRLT
701: DLLNRYKGKF KHYDVNNEML HGSFYQDKLG KDIRVNMFKT AHQLDPSATL FVNDYHIEDG CDPKSCPEKY TEQILDLQEK GAPVGGIGIQ GHIDSPVGPI
801: VCSALDKLGI LGLPIWFTEL DVSSVNEHIR ADDLEVMMWE AFGHPAVEGI MLWGFWELFM SRDNSHLVNA EGDVNEAGKR FLAVKKDWLS HANGHIDQNG
901: AFPFRGYSGN YAVEVITTSS SKVLKTFGVD KEDSSQVITV DLQGL
Arabidopsis Description
RXF12glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G58370]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.