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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 2
  • cytosol 3
  • extracellular 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, extracellular, mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:extracellular, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr2P15100_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G33840.1 GSMUA_Achr2P15100_001 AT2G01950.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr1P12500_001 Banana extracellular, vacuole 41.86 70.47
Zm00001d028103_P001 Maize extracellular, vacuole 29.02 47.93
EER92683 Sorghum vacuole 29.02 47.6
Os03t0201901-00 Rice cytosol 28.18 47.37
KXG39936 Sorghum extracellular, vacuole 28.18 46.79
TraesCS4B01G259100.1 Wheat vacuole 27.45 46.14
HORVU2Hr1G113150.1 Barley cytosol 25.78 46.08
TraesCS4D01G259500.1 Wheat endoplasmic reticulum, extracellular, vacuole 27.35 45.96
TraesCS4A01G045500.1 Wheat endoplasmic reticulum, extracellular, vacuole 27.45 45.82
VIT_03s0091g00890.t01 Wine grape extracellular, vacuole 26.3 45.73
AT4G33830.1 Thale cress vacuole 27.35 45.49
Zm00001d048151_P001 Maize vacuole 27.56 45.44
TraesCS4D01G259100.1 Wheat vacuole 27.45 45.11
CDY28323 Canola vacuole 26.2 45.06
TraesCS4B01G259400.1 Wheat vacuole 27.35 44.94
TraesCS4A01G045800.1 Wheat vacuole 27.35 44.94
Os03t0201500-01 Rice vacuole 26.83 44.77
AT4G33840.1 Thale cress vacuole 26.83 44.62
CDY69164 Canola vacuole 26.3 43.98
CDY28324 Canola endoplasmic reticulum, extracellular, vacuole 26.3 43.98
AT4G33860.1 Thale cress plasma membrane, vacuole 26.41 43.92
GSMUA_Achr1P12520_001 Banana mitochondrion 41.96 43.89
VIT_03s0091g00950.t01 Wine grape cytosol 25.16 43.66
Bra034585.1-P Field mustard vacuole 26.1 43.63
VIT_03s0091g00880.t01 Wine grape vacuole 26.93 43.36
HORVU4Hr1G070260.12 Barley vacuole 27.56 43.21
TraesCS1B01G124500.1 Wheat endoplasmic reticulum, extracellular, vacuole 25.89 43.21
Bra034586.1-P Field mustard endoplasmic reticulum, vacuole 25.89 43.21
TraesCS1D01G107700.1 Wheat extracellular, vacuole 25.89 43.21
CDY48434 Canola vacuole 25.78 43.11
CDY48433 Canola vacuole 25.99 43.01
VIT_03s0091g00900.t01 Wine grape cytosol 24.95 42.91
TraesCS1A01G107100.1 Wheat extracellular, vacuole 25.68 42.86
CDY49378 Canola plasma membrane, vacuole 25.57 42.83
Bra034584.1-P Field mustard vacuole 25.57 42.76
KRH29254 Soybean cytosol 25.26 42.76
Os10t0351700-01 Rice plasma membrane 25.78 42.51
CDY28325 Canola vacuole 25.68 42.49
TraesCS2D01G510500.1 Wheat vacuole 25.16 41.99
TraesCS2B01G537100.1 Wheat vacuole 25.16 41.99
HORVU1Hr1G023120.1 Barley extracellular 24.95 41.57
Zm00001d030468_P001 Maize cytosol 25.47 41.43
KXG34533 Sorghum endoplasmic reticulum, plasma membrane, vacuole 25.57 40.7
Zm00001d048152_P001 Maize cytosol, extracellular, vacuole 27.77 40.43
HORVU2Hr1G122890.1 Barley endoplasmic reticulum, plasma membrane, vacuole 24.53 40.24
TraesCSU01G021800.1 Wheat extracellular, vacuole 24.32 39.83
TraesCS5A01G196600.1 Wheat plasma membrane, vacuole 24.32 39.69
TraesCS5A01G196500.1 Wheat plasma membrane, vacuole 24.32 39.69
HORVU5Hr1G056740.1 Barley vacuole 24.43 39.53
TraesCS5D01G194800.1 Wheat plasma membrane, vacuole 24.11 39.35
Os10t0351600-00 Rice cytosol 24.11 39.35
KRH29253 Soybean extracellular, vacuole 23.17 39.22
EER92684 Sorghum endoplasmic reticulum, extracellular, vacuole 23.07 38.64
Bra017609.1-P Field mustard nucleus 26.2 37.63
TraesCS2A01G584800.1 Wheat plastid, vacuole 23.9 37.6
PGSC0003DMT400037865 Potato cytosol 22.23 37.5
Solyc01g106990.1.1 Tomato vacuole 22.55 37.44
Solyc01g107000.1.1 Tomato endoplasmic reticulum 22.23 36.41
Solyc05g051260.2.1 Tomato golgi, vacuole 21.92 36.4
GSMUA_Achr5P11430_001 Banana extracellular, vacuole 20.98 35.26
Os03t0201800-01 Rice extracellular 21.4 35.22
CDX72434 Canola cytosol, vacuole 26.51 28.96
Solyc01g106980.1.1 Tomato cytosol 23.17 20.11
GSMUA_Achr6P30170_001 Banana cytosol 12.94 17.89
GSMUA_Achr9P09810_001 Banana cytosol 12.53 17.14
GSMUA_Achr1P24570_001 Banana cytosol 12.63 10.21
Protein Annotations
Gene3D:2.60.120.260Gene3D:3.20.20.80MapMan:35.1InterPro:CenC_carb-bdInterPro:GH10GO:GO:0003674
GO:GO:0003824GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787
GO:GO:0016798EnsemblPlantsGene:GSMUA_Achr1G12510_001EnsemblPlants:GSMUA_Achr1P12510_001EnsemblPlants:GSMUA_Achr1T12510_001InterPro:Galactose-bd-like_sfInterPro:Glycoside_hydrolase_SF
InterPro:IPR001000InterPro:IPR008979UniProt:M0RZA9PFAM:PF00331PFAM:PF02018PFscan:PS51760
PANTHER:PTHR31490PANTHER:PTHR31490:SF2SMART:SM00633SUPFAM:SSF49785SUPFAM:SSF51445UniParc:UPI0002962988
SEG:seg:::::
Description
Putative Endo-1,4-beta-xylanase C [Source:GMGC_GENE;Acc:GSMUA_Achr1G12510_001]
Coordinates
chr1:+:9592398..9600984
Molecular Weight (calculated)
107486.0 Da
IEP (calculated)
6.219
GRAVY (calculated)
-0.347
Length
958 amino acids
Sequence
(BLAST)
001: MLYTFSAWLQ VDQGNTTVTA IFKTAKDGFV HVGAVEARSG CWSMLKGGLT AKSSDPAEFY FESKNTRVEI WVDSVSLQPF TEDQWRAHQE ESINKVRKKT
101: VAIQAVDANG HALPGASVSI QQTRSGFPLG CALKSTILQS SAYQSWFTAR FNVTTFTNEM KWYSNEKVEG NETYAVADAM LAFAKQHGIA VRGHNVVWDD
201: RQYVQNWVQS LPTQKLREAV NRRFNSVMTR YRGQVIAWDV VNENVHFSYF ESRLGENASS IFYQQAHQLD PNALMFLNDF NTLEAPEDEK VTPVKYLQKL
301: QQIQSFGNFP RMAIGLEGHF TTPDISYMRS ALDNLAGANV PIWLTEVDVA HSNESKHLED ILREAYSHPA VQGIVIFGVW NPKGCFSRMC LTDVNFKNLP
401: TGDVVDKLIA EWRTHNCLAE PQRAQYGGGI VRNPEFNDGS TGWSVFGFGQ IVERTSDTGN RFLATDRRNL SHQSMSQKVY LERGMLYTFS AWLQVDQGNT
501: TITAIFETAK DGLVPIGAVE ARSGCWSMLK GGLTAKSSGP AEFHFEVSST KDTSVEIWVD SVSLQPFTEG QWRAHQAESI NKVRKKTLAI RAVDANGHAV
601: PGASVSIQQK RSGFPFGCAI ASTILENSAY QSWFTSRFTV TTFENEMKWP SNEPEQGKEQ YADADAMLAF AKQHGIAVRG HNLVMDVPEA VQSWVQSLPT
701: QQLREAVNKR FNSVIPRYRG QVIAWDVVNE NIHNTYYEDK LGENASSIFY QQAHQLDPNA LMFLNDFNTL EAPVDDKATP EKYLQRLQQI RSFGNLPRMA
801: IGLESHFTIP DISYVRSALD KLAGANVPIW LTELDVANSN ESKYLEDVLR EAYSHPAVQG IVMWGAWHPQ GCWRMCLTDN NFKNLPTGDV VDKLIFEWKS
901: DNLAATTDAD GLYRVELFHG EYKITVSHPS SNSSSVRSLT LDSATQNNNV LSFIVLSN
Best Arabidopsis Sequence Match ( AT4G33830.1 )
(BLAST)
001: MKLLLLLPLA FCCLSLSRCE EILVPYDYSA TIECLEIPYK PQYNGGIIVN PDMQNGSQGW SQFENAKVNF REFGGNKFVV ATQRNQSSDS VSQKVYLEKG
101: ILYTFSAWLQ VSTGKAPVSA VFKKNGEYKH AGSVVAESKC WSMLKGGLTV DESGPAELFV ESEDTTVEIW VDSVSLQPFT QDEWNAHQEQ SIDNSRKGPV
201: RIRVVNNKGE KIPNASITIE QKRLGFPFGS AVAQNILGNQ AYQNWFTQRF TVTTFENEMK WYSTESVRGI ENYTVADAML RFFNQHGIAV RGHNVVWDHP
301: KYQSKWVTSL SRNDLYNAVK RRVFSVVSRY KGQLAGWDVV NENLHHSFFE SKFGPNASNN IFAMAHAIDP STTMFMNEFY TLEDPTDLKA SPAKYLEKLR
401: ELQSIRVRGN IPLGIGLESH FSTPNIPYMR SALDTLGATG LPIWLTEIDV KAPSSDQAKY FEQVLREGHA HPHVKGMVTW TAYAPNCYHM CLTDGNFKNL
501: PTGDVVDKLI REWGGLRSQT TEVTDADGFF EASLFHGDYD LNISHPLTNS SVSHNFTLTS DDSSLHTQPS TFVFRV
Arabidopsis Description
Glycosyl hydrolase family 10 protein [Source:UniProtKB/TrEMBL;Acc:F4JJU7]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.