Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G33840.1 | KRH42483 | AT2G01950.1 | 19000166 |
| AT4G33840.1 | KRH58580 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH29253 | Soybean | extracellular, vacuole | 82.86 | 82.86 |
| CDY28323 | Canola | vacuole | 55.65 | 56.55 |
| VIT_03s0091g00890.t01 | Wine grape | extracellular, vacuole | 54.77 | 56.26 |
| VIT_03s0091g00900.t01 | Wine grape | cytosol | 55.3 | 56.19 |
| KRG91114 | Soybean | nucleus | 8.3 | 55.95 |
| CDY28324 | Canola | endoplasmic reticulum, extracellular, vacuole | 56.36 | 55.67 |
| CDY69164 | Canola | vacuole | 56.18 | 55.5 |
| CDY48434 | Canola | vacuole | 56.18 | 55.5 |
| Bra034584.1-P | Field mustard | vacuole | 56.01 | 55.32 |
| VIT_03s0091g00880.t01 | Wine grape | vacuole | 58.13 | 55.29 |
| VIT_03s0091g00950.t01 | Wine grape | cytosol | 53.89 | 55.25 |
| Bra034585.1-P | Field mustard | vacuole | 55.83 | 55.15 |
| AT4G33840.1 | Thale cress | vacuole | 55.12 | 54.17 |
| AT4G33860.1 | Thale cress | plasma membrane, vacuole | 54.95 | 53.99 |
| AT4G33830.1 | Thale cress | vacuole | 54.06 | 53.12 |
| CDY49378 | Canola | plasma membrane, vacuole | 53.53 | 52.97 |
| Bra034586.1-P | Field mustard | endoplasmic reticulum, vacuole | 52.83 | 52.09 |
| Zm00001d028103_P001 | Maize | extracellular, vacuole | 53.36 | 52.07 |
| CDY48433 | Canola | vacuole | 53.18 | 51.99 |
| CDY28325 | Canola | vacuole | 52.47 | 51.3 |
| Os03t0201901-00 | Rice | cytosol | 51.59 | 51.23 |
| EER92683 | Sorghum | vacuole | 52.3 | 50.68 |
| TraesCS4D01G259500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 50.88 | 50.53 |
| TraesCS4B01G259100.1 | Wheat | vacuole | 50.53 | 50.18 |
| Os03t0201500-01 | Rice | vacuole | 50.88 | 50.17 |
| TraesCS4A01G045500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 50.71 | 50.0 |
| TraesCS4D01G259100.1 | Wheat | vacuole | 51.06 | 49.57 |
| GSMUA_Achr1P12500_001 | Banana | extracellular, vacuole | 49.82 | 49.56 |
| TraesCS4B01G259400.1 | Wheat | vacuole | 50.88 | 49.4 |
| KXG39936 | Sorghum | extracellular, vacuole | 50.35 | 49.39 |
| TraesCS4A01G045800.1 | Wheat | vacuole | 50.35 | 48.89 |
| Zm00001d048151_P001 | Maize | vacuole | 49.47 | 48.19 |
| Solyc01g106990.1.1 | Tomato | vacuole | 49.12 | 48.18 |
| HORVU4Hr1G070260.12 | Barley | vacuole | 51.24 | 47.46 |
| Bra017609.1-P | Field mustard | nucleus | 55.65 | 47.23 |
| KRH35662 | Soybean | cytosol, nucleus, vacuole | 34.28 | 46.86 |
| HORVU2Hr1G122890.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 48.23 | 46.75 |
| KRH35663 | Soybean | plasma membrane, vacuole | 47.88 | 46.64 |
| Os10t0351700-01 | Rice | plasma membrane | 47.88 | 46.64 |
| KRG91113 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 47.53 | 46.38 |
| TraesCS1B01G124500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 47.0 | 46.34 |
| TraesCS5A01G196600.1 | Wheat | plasma membrane, vacuole | 48.06 | 46.34 |
| TraesCS5A01G196500.1 | Wheat | plasma membrane, vacuole | 48.06 | 46.34 |
| Solyc01g107000.1.1 | Tomato | endoplasmic reticulum | 47.7 | 46.15 |
| HORVU5Hr1G056740.1 | Barley | vacuole | 48.23 | 46.11 |
| Zm00001d030468_P001 | Maize | cytosol | 47.88 | 46.01 |
| TraesCS1D01G107700.1 | Wheat | extracellular, vacuole | 46.64 | 45.99 |
| HORVU2Hr1G113150.1 | Barley | cytosol | 43.46 | 45.9 |
| TraesCSU01G021800.1 | Wheat | extracellular, vacuole | 47.35 | 45.81 |
| HORVU1Hr1G023120.1 | Barley | extracellular | 46.47 | 45.74 |
| TraesCS5D01G194800.1 | Wheat | plasma membrane, vacuole | 47.35 | 45.66 |
| KXG34533 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 48.41 | 45.51 |
| TraesCS1A01G107100.1 | Wheat | extracellular, vacuole | 45.94 | 45.3 |
| TraesCS2D01G510500.1 | Wheat | vacuole | 45.76 | 45.12 |
| TraesCS2B01G537100.1 | Wheat | vacuole | 45.41 | 44.77 |
| EER92684 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 45.23 | 44.76 |
| PGSC0003DMT400037865 | Potato | cytosol | 44.52 | 44.37 |
| TraesCS2A01G584800.1 | Wheat | plastid, vacuole | 47.0 | 43.68 |
| Solyc05g051260.2.1 | Tomato | golgi, vacuole | 44.35 | 43.5 |
| Zm00001d048152_P001 | Maize | cytosol, extracellular, vacuole | 50.35 | 43.31 |
| Os10t0351600-00 | Rice | cytosol | 42.58 | 41.06 |
| KRG91115 | Soybean | cytoskeleton, cytosol, plastid | 12.9 | 40.78 |
| Os03t0201800-01 | Rice | extracellular | 41.17 | 40.03 |
| KRH51408 | Soybean | extracellular | 35.16 | 36.12 |
| KRH60710 | Soybean | extracellular | 35.34 | 35.91 |
| CDX72434 | Canola | cytosol, vacuole | 55.48 | 35.8 |
| GSMUA_Achr1P12520_001 | Banana | mitochondrion | 45.58 | 28.17 |
| GSMUA_Achr1P12510_001 | Banana | cytosol | 42.76 | 25.26 |
| Solyc01g106980.1.1 | Tomato | cytosol | 48.41 | 24.82 |
| KRH52165 | Soybean | cytosol, nucleus | 27.56 | 21.02 |
| KRH61477 | Soybean | cytosol | 27.21 | 20.78 |
| KRH05535 | Soybean | mitochondrion | 27.21 | 16.54 |
| KRH15483 | Soybean | mitochondrion | 27.03 | 16.45 |
Protein Annotations
| Gene3D:2.60.120.260 | Gene3D:3.20.20.80 | MapMan:35.1 | EMBL:ACUP02006791 | InterPro:CenC_carb-bd | InterPro:GH10 |
| EnsemblPlantsGene:GLYMA_11G105200 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 | InterPro:Galactose-bd-like_sf | InterPro:Glycoside_hydrolase_SF | UniProt:I1LIY1 |
| InterPro:IPR001000 | InterPro:IPR008979 | EnsemblPlants:KRH29254 | ProteinID:KRH29254 | ProteinID:KRH29254.1 | PFAM:PF00331 |
| PFAM:PF02018 | PFscan:PS51760 | PANTHER:PTHR31490 | PANTHER:PTHR31490:SF2 | MetaCyc:PWY-6784 | SMART:SM00633 |
| SUPFAM:SSF49785 | SUPFAM:SSF51445 | UniParc:UPI000296073C | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr11:-:7985751..7988461
Molecular Weight (calculated)
64025.3 Da
IEP (calculated)
6.010
GRAVY (calculated)
-0.441
Length
566 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLTTGFEVE ALSYDYSASI ECLAHPLKPL YNGGIIQNPE LNNELQGWTA FGDAKIEHRE SLGNKYAVVH SRNQARDSVS QKIYLQKDKH YTLSAWIQVK
101: GSEGNVPVTA VVKTTTRLKF AGAIFAESNC WSMLKGGLTS DESGPAELYF EGNDTSAEIW IDNVSLQPFT EEEWRSHQDE SIERARKRKV LVQAVDEEGN
201: PLPNATISFV QKRPGFPFGS SMSSSILNNK LYQDWFTSRF TVTTFGNEMK WYSTENVQGK EDYSVADAML QFAKQHNIAV RGHNIFWDDP HFQPSWVPSL
301: SPPQLNSAVE KRVRSVVSRY RGQLIAWDVV NENLHFSFFE DKLGQAFSGR IFNEAHNIDG QTTLFLNEYN TIEDSRDGVS SPAKYIQKLK QIQSYPGNAG
401: LPIGIGLEAH FPAQGINFPY LRASIDNLAA TRLPIWITEL DVASQPKQSQ YFELALRELH GHPMVRGLVM WTGPSPEGCY RICLVDNNFR NLPAGKVVDK
501: LLSEWRLSKL SGMTDQNGFF EANLFHGDYE IEVSHPVMKN YTFTQRLQVT PTDDSKETKQ FVQLSM
101: GSEGNVPVTA VVKTTTRLKF AGAIFAESNC WSMLKGGLTS DESGPAELYF EGNDTSAEIW IDNVSLQPFT EEEWRSHQDE SIERARKRKV LVQAVDEEGN
201: PLPNATISFV QKRPGFPFGS SMSSSILNNK LYQDWFTSRF TVTTFGNEMK WYSTENVQGK EDYSVADAML QFAKQHNIAV RGHNIFWDDP HFQPSWVPSL
301: SPPQLNSAVE KRVRSVVSRY RGQLIAWDVV NENLHFSFFE DKLGQAFSGR IFNEAHNIDG QTTLFLNEYN TIEDSRDGVS SPAKYIQKLK QIQSYPGNAG
401: LPIGIGLEAH FPAQGINFPY LRASIDNLAA TRLPIWITEL DVASQPKQSQ YFELALRELH GHPMVRGLVM WTGPSPEGCY RICLVDNNFR NLPAGKVVDK
501: LLSEWRLSKL SGMTDQNGFF EANLFHGDYE IEVSHPVMKN YTFTQRLQVT PTDDSKETKQ FVQLSM
001: MKLLLLLLAF CCLSLSRCEE QSVPYDYSAT IECLENPYKP QYNGGIIVNP DLQNGSQGWS QFGNAKVDFR EFGGNKFVVA TQRNQSSDSI SQKVYLEKGI
101: LYTFSAWLQV SIGKSPVSAV FKKNGEYKHA GSVVAESKCW SMLKGGLTVD ESGPAELFFE SENTMVEIWV DSVSLQPFTQ EEWNSHHEQS IGKVRKGTVR
201: IRVMNNKGET IPNATISIEQ KKLGYPFGCA VENNILGNQA YQNWFTQRFT VTTFGNEMKW YSTERIRGQE DYSTADAMLS FFKSHGIAVR GHNVLWDDPK
301: YQPGWVNSLS GNDLYNAVKR RVYSVVSRYK GQLLGWDVVN ENLHFSFFES KFGPKASYNT YTMAHAVDPR TPMFMNEYNT LEQPKDLTSS PARYLGKLRE
401: LQSIRVAGKI PLAIGLESHF STPNIPYMRS ALDTFGATGL PIWLTEIDVD APPNVRANYF EQVLREGHAH PKVNGMVMWT GYSPSGCYRM CLTDGNFKNL
501: PTGDVVDKLL REWGGLRSQT TGVTDANGLF EAPLFHGDYD LRISHPLTNS KASYNFTLTS DDDSSQKQPS LYVFRV
101: LYTFSAWLQV SIGKSPVSAV FKKNGEYKHA GSVVAESKCW SMLKGGLTVD ESGPAELFFE SENTMVEIWV DSVSLQPFTQ EEWNSHHEQS IGKVRKGTVR
201: IRVMNNKGET IPNATISIEQ KKLGYPFGCA VENNILGNQA YQNWFTQRFT VTTFGNEMKW YSTERIRGQE DYSTADAMLS FFKSHGIAVR GHNVLWDDPK
301: YQPGWVNSLS GNDLYNAVKR RVYSVVSRYK GQLLGWDVVN ENLHFSFFES KFGPKASYNT YTMAHAVDPR TPMFMNEYNT LEQPKDLTSS PARYLGKLRE
401: LQSIRVAGKI PLAIGLESHF STPNIPYMRS ALDTFGATGL PIWLTEIDVD APPNVRANYF EQVLREGHAH PKVNGMVMWT GYSPSGCYRM CLTDGNFKNL
501: PTGDVVDKLL REWGGLRSQT TGVTDANGLF EAPLFHGDYD LRISHPLTNS KASYNFTLTS DDDSSQKQPS LYVFRV
Arabidopsis Description
At4g33840/F17I5_30 [Source:UniProtKB/TrEMBL;Acc:Q6NQI6]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.