Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G33840.1 | CDY03088 | AT2G01950.1 | 19000166 |
| AT4G33840.1 | CDY17621 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034584.1-P | Field mustard | vacuole | 99.3 | 99.3 |
| CDY28323 | Canola | vacuole | 94.24 | 96.95 |
| CDY69164 | Canola | vacuole | 87.61 | 87.61 |
| CDY28324 | Canola | endoplasmic reticulum, extracellular, vacuole | 86.39 | 86.39 |
| AT4G33840.1 | Thale cress | vacuole | 79.58 | 79.17 |
| AT4G33830.1 | Thale cress | vacuole | 77.14 | 76.74 |
| CDY49378 | Canola | plasma membrane, vacuole | 76.44 | 76.57 |
| CDY48433 | Canola | vacuole | 73.12 | 72.37 |
| CDY28325 | Canola | vacuole | 72.43 | 71.68 |
| KRH29254 | Soybean | cytosol | 55.5 | 56.18 |
| VIT_03s0091g00890.t01 | Wine grape | extracellular, vacuole | 53.4 | 55.54 |
| VIT_03s0091g00900.t01 | Wine grape | cytosol | 53.23 | 54.76 |
| VIT_03s0091g00880.t01 | Wine grape | vacuole | 56.2 | 54.12 |
| CDX72434 | Canola | cytosol, vacuole | 79.76 | 52.11 |
| VIT_03s0091g00950.t01 | Wine grape | cytosol | 50.09 | 51.99 |
| KRH29253 | Soybean | extracellular, vacuole | 50.26 | 50.88 |
| Zm00001d028103_P001 | Maize | extracellular, vacuole | 51.13 | 50.52 |
| EER92683 | Sorghum | vacuole | 50.61 | 49.66 |
| Os03t0201901-00 | Rice | cytosol | 49.39 | 49.65 |
| TraesCS4D01G259500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 49.39 | 49.65 |
| TraesCS4B01G259100.1 | Wheat | vacuole | 49.21 | 49.47 |
| Os03t0201500-01 | Rice | vacuole | 49.21 | 49.13 |
| TraesCS4A01G045500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 49.21 | 49.13 |
| TraesCS4D01G259100.1 | Wheat | vacuole | 49.91 | 49.06 |
| KXG39936 | Sorghum | extracellular, vacuole | 49.39 | 49.05 |
| Zm00001d048151_P001 | Maize | vacuole | 49.56 | 48.88 |
| TraesCS4B01G259400.1 | Wheat | vacuole | 49.56 | 48.71 |
| GSMUA_Achr1P12500_001 | Banana | extracellular, vacuole | 48.34 | 48.68 |
| TraesCS4A01G045800.1 | Wheat | vacuole | 49.04 | 48.2 |
| Solyc01g106990.1.1 | Tomato | vacuole | 48.17 | 47.83 |
| HORVU4Hr1G070260.12 | Barley | vacuole | 49.74 | 46.64 |
| Os10t0351700-01 | Rice | plasma membrane | 46.6 | 45.96 |
| TraesCS5D01G194800.1 | Wheat | plasma membrane, vacuole | 46.42 | 45.32 |
| HORVU5Hr1G056740.1 | Barley | vacuole | 46.77 | 45.27 |
| TraesCS1B01G124500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 45.2 | 45.12 |
| TraesCS5A01G196500.1 | Wheat | plasma membrane, vacuole | 46.07 | 44.97 |
| TraesCS5A01G196600.1 | Wheat | plasma membrane, vacuole | 46.07 | 44.97 |
| HORVU1Hr1G023120.1 | Barley | extracellular | 45.03 | 44.87 |
| TraesCS1A01G107100.1 | Wheat | extracellular, vacuole | 44.85 | 44.77 |
| TraesCS1D01G107700.1 | Wheat | extracellular, vacuole | 44.68 | 44.6 |
| HORVU2Hr1G113150.1 | Barley | cytosol | 41.71 | 44.59 |
| Zm00001d030468_P001 | Maize | cytosol | 45.72 | 44.48 |
| KXG34533 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 46.42 | 44.19 |
| HORVU2Hr1G122890.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 44.85 | 44.01 |
| TraesCSU01G021800.1 | Wheat | extracellular, vacuole | 44.5 | 43.59 |
| Zm00001d048152_P001 | Maize | cytosol, extracellular, vacuole | 49.39 | 43.01 |
| TraesCS2B01G537100.1 | Wheat | vacuole | 42.93 | 42.86 |
| PGSC0003DMT400037865 | Potato | cytosol | 42.41 | 42.78 |
| Solyc05g051260.2.1 | Tomato | golgi, vacuole | 42.93 | 42.63 |
| Solyc01g107000.1.1 | Tomato | endoplasmic reticulum | 43.46 | 42.56 |
| TraesCS2D01G510500.1 | Wheat | vacuole | 42.41 | 42.33 |
| TraesCS2A01G584800.1 | Wheat | plastid, vacuole | 44.68 | 42.04 |
| EER92684 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 40.84 | 40.91 |
| CDX71170 | Canola | cytosol, plastid, vacuole | 31.24 | 39.43 |
| CDX72432 | Canola | cytosol | 10.65 | 39.35 |
| Os03t0201800-01 | Rice | extracellular | 38.39 | 37.8 |
| Os10t0351600-00 | Rice | cytosol | 38.57 | 37.65 |
| CDX90288 | Canola | endoplasmic reticulum, extracellular | 36.65 | 37.23 |
| CDY49598 | Canola | cytosol | 11.87 | 35.98 |
| CDX72430 | Canola | extracellular, vacuole | 35.43 | 35.8 |
| CDY49377 | Canola | extracellular, vacuole | 35.6 | 35.79 |
| CDY12095 | Canola | vacuole | 29.84 | 35.11 |
| CDY49599 | Canola | extracellular, vacuole | 21.47 | 34.75 |
| GSMUA_Achr1P12520_001 | Banana | mitochondrion | 45.55 | 28.49 |
| GSMUA_Achr1P12510_001 | Banana | cytosol | 43.11 | 25.78 |
| Solyc01g106980.1.1 | Tomato | cytosol | 46.42 | 24.09 |
| CDY29140 | Canola | cytosol | 26.0 | 17.47 |
| CDY48844 | Canola | cytosol | 27.57 | 17.16 |
| CDY53797 | Canola | cytosol | 27.23 | 16.94 |
| CDX75175 | Canola | cytosol | 26.18 | 15.72 |
| CDY53833 | Canola | endoplasmic reticulum, extracellular | 26.53 | 10.45 |
| CDY22606 | Canola | endoplasmic reticulum, vacuole | 26.53 | 10.44 |
Protein Annotations
| Gene3D:2.60.120.260 | Gene3D:3.20.20.80 | MapMan:35.1 | GO:A0A078IGB1 | UniProt:A0A078IGB1 | EnsemblPlants:CDY48434 |
| ProteinID:CDY48434 | ProteinID:CDY48434.1 | InterPro:CenC_carb-bd | InterPro:GH10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 |
| EnsemblPlantsGene:GSBRNA2T00089469001 | InterPro:Galactose-bd-like_sf | InterPro:Glycoside_hydrolase_SF | InterPro:IPR001000 | InterPro:IPR008979 | PFAM:PF00331 |
| PFAM:PF02018 | PFscan:PS51760 | PANTHER:PTHR31490 | PANTHER:PTHR31490:SF2 | MetaCyc:PWY-6784 | SMART:SM00633 |
| SUPFAM:SSF49785 | SUPFAM:SSF51445 | SignalP:SignalP-noTM | UniPathway:UPA00114 | UniParc:UPI0004EEC6D5 | SEG:seg |
Description
BnaA08g11430DBnaA08g11430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IGB1]
Coordinates
chrLK032773:+:35027..38039
Molecular Weight (calculated)
63920.5 Da
IEP (calculated)
7.054
GRAVY (calculated)
-0.346
Length
573 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLLLLLLAF CCLSLSRCEE KNVPYDYSAT IECLGNPNKP QYNGGIIVNP DLQNGSQGWS QMGNTKVDFT EFGGNKFVIA RGRNQSYDSV SQKVYLEKGL
101: LYTFSAWLQV SKGNSPVRAV FKKNGKYKHA GSVIAESKCW SMLKGGLTVD ESGPADLYFE SEDTTAEIWV DSVSLQPFTQ EEWSSHHKQS IDITRKGAVR
201: IRAVNSAGEP VPNATISILQ NRLGFPFGCS AGSNILGNQA FQDWFTKRFT VTVFENEMKW YSTEVVRGKE DYSTADAMVR LFKQHGIAIR GHHIILDDPK
301: YQPSWVTALN GPDLYNAVKR RVDSVVSRYK GQLASWDVVN ENLHFSFFEN KMGPKVSYNV FEQAHAVDPT TTMFMNEFNT LEQPGDAVSS PARYLQKLRE
401: LQSIRVPGNI SLGIGLESHF FNTPNIPYMR SALDTLGATG LPIWLTEVDV AAPPNVQANY FEQVLREGHA HPKVTGMVTW SGYNPRGCFR MCLTDGNFRN
501: LPTGDVVDKL LREWGGLRGK TTGLTDADGY FEASLFHGDY DLSIAHPLTN STASHSFKLT SDDYHPSPTV VRV
101: LYTFSAWLQV SKGNSPVRAV FKKNGKYKHA GSVIAESKCW SMLKGGLTVD ESGPADLYFE SEDTTAEIWV DSVSLQPFTQ EEWSSHHKQS IDITRKGAVR
201: IRAVNSAGEP VPNATISILQ NRLGFPFGCS AGSNILGNQA FQDWFTKRFT VTVFENEMKW YSTEVVRGKE DYSTADAMVR LFKQHGIAIR GHHIILDDPK
301: YQPSWVTALN GPDLYNAVKR RVDSVVSRYK GQLASWDVVN ENLHFSFFEN KMGPKVSYNV FEQAHAVDPT TTMFMNEFNT LEQPGDAVSS PARYLQKLRE
401: LQSIRVPGNI SLGIGLESHF FNTPNIPYMR SALDTLGATG LPIWLTEVDV AAPPNVQANY FEQVLREGHA HPKVTGMVTW SGYNPRGCFR MCLTDGNFRN
501: LPTGDVVDKL LREWGGLRGK TTGLTDADGY FEASLFHGDY DLSIAHPLTN STASHSFKLT SDDYHPSPTV VRV
001: MKLLLLLLAF CCLSLSRCEE QSVPYDYSAT IECLENPYKP QYNGGIIVNP DLQNGSQGWS QFGNAKVDFR EFGGNKFVVA TQRNQSSDSI SQKVYLEKGI
101: LYTFSAWLQV SIGKSPVSAV FKKNGEYKHA GSVVAESKCW SMLKGGLTVD ESGPAELFFE SENTMVEIWV DSVSLQPFTQ EEWNSHHEQS IGKVRKGTVR
201: IRVMNNKGET IPNATISIEQ KKLGYPFGCA VENNILGNQA YQNWFTQRFT VTTFGNEMKW YSTERIRGQE DYSTADAMLS FFKSHGIAVR GHNVLWDDPK
301: YQPGWVNSLS GNDLYNAVKR RVYSVVSRYK GQLLGWDVVN ENLHFSFFES KFGPKASYNT YTMAHAVDPR TPMFMNEYNT LEQPKDLTSS PARYLGKLRE
401: LQSIRVAGKI PLAIGLESHF STPNIPYMRS ALDTFGATGL PIWLTEIDVD APPNVRANYF EQVLREGHAH PKVNGMVMWT GYSPSGCYRM CLTDGNFKNL
501: PTGDVVDKLL REWGGLRSQT TGVTDANGLF EAPLFHGDYD LRISHPLTNS KASYNFTLTS DDDSSQKQPS LYVFRV
101: LYTFSAWLQV SIGKSPVSAV FKKNGEYKHA GSVVAESKCW SMLKGGLTVD ESGPAELFFE SENTMVEIWV DSVSLQPFTQ EEWNSHHEQS IGKVRKGTVR
201: IRVMNNKGET IPNATISIEQ KKLGYPFGCA VENNILGNQA YQNWFTQRFT VTTFGNEMKW YSTERIRGQE DYSTADAMLS FFKSHGIAVR GHNVLWDDPK
301: YQPGWVNSLS GNDLYNAVKR RVYSVVSRYK GQLLGWDVVN ENLHFSFFES KFGPKASYNT YTMAHAVDPR TPMFMNEYNT LEQPKDLTSS PARYLGKLRE
401: LQSIRVAGKI PLAIGLESHF STPNIPYMRS ALDTFGATGL PIWLTEIDVD APPNVRANYF EQVLREGHAH PKVNGMVMWT GYSPSGCYRM CLTDGNFKNL
501: PTGDVVDKLL REWGGLRSQT TGVTDANGLF EAPLFHGDYD LRISHPLTNS KASYNFTLTS DDDSSQKQPS LYVFRV
Arabidopsis Description
At4g33840/F17I5_30 [Source:UniProtKB/TrEMBL;Acc:Q6NQI6]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.