Factsheet for Os03t0201500-01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
Os10t0114400-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33840.1	Os10t0114400-01	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G259500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	77.7	78.25
TraesCS4B01G259100.1	Wheat	vacuole	77.0	77.54
TraesCS4A01G045500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	77.53	77.53
KXG39936	Sorghum	extracellular, vacuole	77.87	77.47
Zm00001d048152_P001	Maize	cytosol, extracellular, vacuole	78.4	68.39
Os03t0201901-00	Rice	cytosol	66.9	67.37
GSMUA_Achr1P12500_001	Banana	extracellular, vacuole	53.48	53.95
Os10t0351700-01	Rice	plasma membrane	52.79	52.15
KRH29254	Soybean	cytosol	50.17	50.88
CDY69164	Canola	vacuole	50.35	50.44
VIT_03s0091g00950.t01	Wine grape	cytosol	48.43	50.36
CDY28324	Canola	endoplasmic reticulum, extracellular, vacuole	50.17	50.26
Bra034585.1-P	Field mustard	vacuole	50.17	50.26
VIT_03s0091g00900.t01	Wine grape	cytosol	48.43	49.91
VIT_03s0091g00890.t01	Wine grape	extracellular, vacuole	47.39	49.36
CDY48434	Canola	vacuole	49.13	49.21
CDY28323	Canola	vacuole	47.74	49.19
AT4G33840.1	Thale cress	vacuole	49.3	49.13
Bra034584.1-P	Field mustard	vacuole	48.95	49.04
VIT_03s0091g00880.t01	Wine grape	vacuole	50.7	48.91
AT4G33830.1	Thale cress	vacuole	48.78	48.61
AT4G33860.1	Thale cress	plasma membrane, vacuole	48.61	48.44
Os03t0201800-01	Rice	extracellular	48.43	47.77
KRH29253	Soybean	extracellular, vacuole	45.82	46.47
Os10t0351600-00	Rice	cytosol	47.39	46.34
CDY49378	Canola	plasma membrane, vacuole	45.82	45.98
Bra034586.1-P	Field mustard	endoplasmic reticulum, vacuole	45.47	45.47
CDY48433	Canola	vacuole	45.82	45.42
CDY28325	Canola	vacuole	45.64	45.25
Os03t0243700-01	Rice	cytosol	31.36	44.55
Solyc01g106990.1.1	Tomato	vacuole	44.6	44.37
Solyc01g107000.1.1	Tomato	endoplasmic reticulum	44.25	43.42
PGSC0003DMT400037865	Potato	cytosol	41.64	42.08
Solyc05g051260.2.1	Tomato	golgi, vacuole	41.29	41.07
Bra017609.1-P	Field mustard	nucleus	47.21	40.63
Os05t0304900-01	Rice	extracellular, vacuole	32.75	38.06
CDX72434	Canola	cytosol, vacuole	47.39	31.01
Os05t0319900-00	Rice	cytosol, mitochondrion, plastid, vacuole	12.02	30.8
Os01t0134800-01	Rice	extracellular, mitochondrion, vacuole	19.51	30.43
GSMUA_Achr1P12520_001	Banana	mitochondrion	47.04	29.48
Os01t0134900-01	Rice	extracellular	27.18	28.01
GSMUA_Achr1P12510_001	Banana	cytosol	44.77	26.83
Solyc01g106980.1.1	Tomato	cytosol	44.25	23.01
Os03t0672900-00	Rice	extracellular	29.44	22.35
Os07t0456700-01	Rice	plasma membrane	28.92	15.08

Protein Annotations

Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:35.1	EntrezGene:9271490	UniProt:A0A0P0VUI4	ProteinID:BAS82824.1
InterPro:CenC_carb-bd	InterPro:GH10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF
InterPro:IPR001000	InterPro:IPR008979	EnsemblPlantsGene:Os03g0201500	EnsemblPlants:Os03t0201500-01	PFAM:PF00331	PFAM:PF02018
PFscan:PS51257	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF13	SMART:SM00633	SUPFAM:SSF49785
SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI0001C7EFA8	RefSeq:XP_015632159.1	SEG:seg	:

Description

Glycoside hydrolase, family 10 protein. (Os03t0201500-01)

Coordinates

chr3:+:5317215..5321081

Molecular Weight (calculated)

62910.2 Da

IEP (calculated)

6.245

GRAVY (calculated)

-0.182

Length

574 amino acids

Sequence
(BLAST)

001: MKVDPMGKLL FLLAWITLLQ GCCMVKSFSY DYSSSIECLP EPPEPQYGGG VVRNADFSAG LHGWSAFGYG SLAEGSSPAG NRYAVATNRT RPYQSVSQKV
101: LLQNDTHYTL SAWLQVSDGV ADVRVVVKAA GDFIHAGGVA AKSGCWSMLK GGLTTVSGGR AEIYFESNAT ADIWVDSVSL KPFTKEEWSN HRDASASTAR
201: RKTVRLQATD SAGNPLPGAA VSLENVRNGF PLGAAMSGEI LRNPSYQRWF ASRFTVTTFE NEMKWYSTEP APGREDYSVP DAMLEFARSH GIAVRGHNVF
301: WDDPNQQPRW VQGLPYPQLL AAASRRIRSV VARYAGKLIA WDVVNENLHF SFFERRFGWD ASTAFYAAAR MLDTGSTLMF MNEYNTLEQP GDMAALPARY
401: VQRLKQIIGG YPQNGAGMAI GLEGHFTAPV NIPYMRAALD TLAQAGVPVW LTEVDVGGGA SQAYYLEEIL REAYAHPAVQ GVILWAAWRP QGCYVMCLTD
501: NDFNNLPQGD VVDRLITEWS TAPRAGTTDA EGFFQAELAH GEYKVTVTHP SLNTSVSQSV KVEMGSGSHY FIQV

Best Arabidopsis Sequence Match ( AT4G33840.1 )
(BLAST)

001: MKLLLLLLAF CCLSLSRCEE QSVPYDYSAT IECLENPYKP QYNGGIIVNP DLQNGSQGWS QFGNAKVDFR EFGGNKFVVA TQRNQSSDSI SQKVYLEKGI
101: LYTFSAWLQV SIGKSPVSAV FKKNGEYKHA GSVVAESKCW SMLKGGLTVD ESGPAELFFE SENTMVEIWV DSVSLQPFTQ EEWNSHHEQS IGKVRKGTVR
201: IRVMNNKGET IPNATISIEQ KKLGYPFGCA VENNILGNQA YQNWFTQRFT VTTFGNEMKW YSTERIRGQE DYSTADAMLS FFKSHGIAVR GHNVLWDDPK
301: YQPGWVNSLS GNDLYNAVKR RVYSVVSRYK GQLLGWDVVN ENLHFSFFES KFGPKASYNT YTMAHAVDPR TPMFMNEYNT LEQPKDLTSS PARYLGKLRE
401: LQSIRVAGKI PLAIGLESHF STPNIPYMRS ALDTFGATGL PIWLTEIDVD APPNVRANYF EQVLREGHAH PKVNGMVMWT GYSPSGCYRM CLTDGNFKNL
501: PTGDVVDKLL REWGGLRSQT TGVTDANGLF EAPLFHGDYD LRISHPLTNS KASYNFTLTS DDDSSQKQPS LYVFRV

Arabidopsis Description

At4g33840/F17I5_30 [Source:UniProtKB/TrEMBL;Acc:Q6NQI6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.