Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 5
- vacuole 5
- plasma membrane 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra034586.1-P | Field mustard | endoplasmic reticulum, vacuole | 82.47 | 82.75 |
| CDY28325 | Canola | vacuole | 83.16 | 82.73 |
| CDY48433 | Canola | vacuole | 82.81 | 82.38 |
| AT4G33840.1 | Thale cress | vacuole | 79.69 | 79.69 |
| AT4G33830.1 | Thale cress | vacuole | 77.08 | 77.08 |
| VIT_03s0091g00900.t01 | Wine grape | cytosol | 54.51 | 56.37 |
| VIT_03s0091g00880.t01 | Wine grape | vacuole | 57.81 | 55.97 |
| VIT_03s0091g00950.t01 | Wine grape | cytosol | 52.95 | 55.25 |
| KRH29254 | Soybean | cytosol | 53.99 | 54.95 |
| VIT_03s0091g00890.t01 | Wine grape | extracellular, vacuole | 52.08 | 54.45 |
| KRH29253 | Soybean | extracellular, vacuole | 49.83 | 50.71 |
| Zm00001d028103_P001 | Maize | extracellular, vacuole | 50.87 | 50.52 |
| EER92683 | Sorghum | vacuole | 50.87 | 50.17 |
| Os03t0201901-00 | Rice | cytosol | 49.31 | 49.82 |
| KXG39936 | Sorghum | extracellular, vacuole | 49.83 | 49.74 |
| GSMUA_Achr1P12500_001 | Banana | extracellular, vacuole | 48.78 | 49.38 |
| TraesCS4D01G259500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 48.78 | 49.3 |
| TraesCS4B01G259100.1 | Wheat | vacuole | 48.78 | 49.3 |
| TraesCS4D01G259100.1 | Wheat | vacuole | 49.83 | 49.23 |
| Solyc01g106990.1.1 | Tomato | vacuole | 48.96 | 48.87 |
| TraesCS4A01G045500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 48.61 | 48.78 |
| TraesCS4B01G259400.1 | Wheat | vacuole | 49.31 | 48.71 |
| Os03t0201500-01 | Rice | vacuole | 48.44 | 48.61 |
| TraesCS4A01G045800.1 | Wheat | vacuole | 49.13 | 48.54 |
| Zm00001d048151_P001 | Maize | vacuole | 48.09 | 47.68 |
| HORVU4Hr1G070260.12 | Barley | vacuole | 49.31 | 46.48 |
| HORVU5Hr1G056740.1 | Barley | vacuole | 47.05 | 45.78 |
| TraesCS5A01G196500.1 | Wheat | plasma membrane, vacuole | 46.35 | 45.49 |
| TraesCS5D01G194800.1 | Wheat | plasma membrane, vacuole | 46.35 | 45.49 |
| TraesCS5A01G196600.1 | Wheat | plasma membrane, vacuole | 46.35 | 45.49 |
| Os10t0351700-01 | Rice | plasma membrane | 45.66 | 45.27 |
| KXG34533 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 47.22 | 45.18 |
| Zm00001d030468_P001 | Maize | cytosol | 46.18 | 45.16 |
| HORVU2Hr1G113150.1 | Barley | cytosol | 42.01 | 45.15 |
| TraesCS1B01G124500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 44.44 | 44.6 |
| TraesCS1D01G107700.1 | Wheat | extracellular, vacuole | 44.44 | 44.6 |
| HORVU1Hr1G023120.1 | Barley | extracellular | 44.44 | 44.52 |
| TraesCS1A01G107100.1 | Wheat | extracellular, vacuole | 44.27 | 44.43 |
| TraesCSU01G021800.1 | Wheat | extracellular, vacuole | 44.97 | 44.27 |
| PGSC0003DMT400037865 | Potato | cytosol | 43.23 | 43.84 |
| Solyc05g051260.2.1 | Tomato | golgi, vacuole | 43.75 | 43.67 |
| HORVU2Hr1G122890.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 44.27 | 43.66 |
| Solyc01g107000.1.1 | Tomato | endoplasmic reticulum | 44.27 | 43.59 |
| Zm00001d048152_P001 | Maize | cytosol, extracellular, vacuole | 48.96 | 42.86 |
| TraesCS2B01G537100.1 | Wheat | vacuole | 42.71 | 42.86 |
| TraesCS2D01G510500.1 | Wheat | vacuole | 42.53 | 42.68 |
| TraesCS2A01G584800.1 | Wheat | plastid, vacuole | 44.79 | 42.36 |
| EER92684 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 42.01 | 42.31 |
| AT4G38300.1 | Thale cress | mitochondrion | 19.44 | 40.43 |
| Os10t0351600-00 | Rice | cytosol | 39.93 | 39.18 |
| Os03t0201800-01 | Rice | extracellular | 39.06 | 38.66 |
| AT4G38650.1 | Thale cress | vacuole | 37.15 | 38.08 |
| AT4G33810.3 | Thale cress | extracellular, vacuole | 36.81 | 37.26 |
| AT2G14690.1 | Thale cress | vacuole | 35.42 | 35.79 |
| AT4G33820.1 | Thale cress | extracellular, vacuole | 35.24 | 35.61 |
| GSMUA_Achr1P12520_001 | Banana | mitochondrion | 46.18 | 29.04 |
| GSMUA_Achr1P12510_001 | Banana | cytosol | 43.92 | 26.41 |
| Solyc01g106980.1.1 | Tomato | cytosol | 47.57 | 24.82 |
| AT4G08160.1 | Thale cress | cytosol | 25.35 | 19.41 |
| AT1G58370.2 | Thale cress | cytosol | 26.22 | 15.98 |
| AT1G10050.3 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 26.22 | 13.79 |
Protein Annotations
| Gene3D:2.60.120.260 | Gene3D:3.20.20.80 | MapMan:35.1 | EntrezGene:829528 | ProteinID:AEE86284.1 | ArrayExpress:AT4G33860 |
| EnsemblPlantsGene:AT4G33860 | RefSeq:AT4G33860 | TAIR:AT4G33860 | RefSeq:AT4G33860-TAIR-G | EnsemblPlants:AT4G33860.1 | TAIR:AT4G33860.1 |
| Unigene:At.50393 | InterPro:CenC_carb-bd | UniProt:F4JJU9 | InterPro:GH10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 |
| InterPro:Galactose-bd-like_sf | InterPro:Glycoside_hydrolase_SF | InterPro:IPR001000 | InterPro:IPR008979 | RefSeq:NP_195112.2 | PFAM:PF00331 |
| PFAM:PF02018 | PFscan:PS51760 | PANTHER:PTHR31490 | PANTHER:PTHR31490:SF2 | SMART:SM00633 | SUPFAM:SSF49785 |
| SUPFAM:SSF51445 | SignalP:SignalP-noTM | UniParc:UPI000034F169 | SEG:seg | : | : |
Description
Glycosyl hydrolase family 10 protein [Source:UniProtKB/TrEMBL;Acc:F4JJU9]
Coordinates
chr4:-:16229908..16232365
Molecular Weight (calculated)
65214.4 Da
IEP (calculated)
8.751
GRAVY (calculated)
-0.402
Length
576 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRLLLLVVL CSLSLSRCES KVVPYDYSAT IECLEIPLKP QYNGGIIVSP DVRDGTLGWT PFGNAKVDFR KIGNHNFFVA RDRKQPFDSV SQKVYLEKGL
101: LYTFSAWLQV SKGKAPVKAV FKKNGEYKLA GSVVAESKCW SMLKGGLTVD ESGPAELYFE SEDTTVEIWV DSVSLQPFTQ EEWNSHHEQS IQKERKRTVR
201: IRAVNSKGEP IPKATISIEQ RKLGFPFGCE VEKNILGNKA YQNWFTQRFT VTTFANEMKW YSTEVVRGKE DYSTADAMLR FFKQHGVAVR GHNILWNDPK
301: YQPKWVNALS GNDLYNAVKR RVFSVVSRYK GQLAGWDVVN ENLHFSYFED KMGPKASYNI FKMAQAFDPT TTMFMNEYNT LEESSDSDSS LARYLQKLRE
401: IRSIRVCGNI SLGIGLESHF KTPNIPYMRS ALDTLAATGL PIWLTEVDVE APPNVQAKYF EQVLREGHAH PQVKGIVTWS GYSPSGCYRM CLTDGNFKNV
501: PTGDVVDKLL HEWGGFRRQT TGVTDADGYF EASLFHGDYD LKIAHPLTNS KASHSFKLTS DVSSSQNQPS SFVFRV
101: LYTFSAWLQV SKGKAPVKAV FKKNGEYKLA GSVVAESKCW SMLKGGLTVD ESGPAELYFE SEDTTVEIWV DSVSLQPFTQ EEWNSHHEQS IQKERKRTVR
201: IRAVNSKGEP IPKATISIEQ RKLGFPFGCE VEKNILGNKA YQNWFTQRFT VTTFANEMKW YSTEVVRGKE DYSTADAMLR FFKQHGVAVR GHNILWNDPK
301: YQPKWVNALS GNDLYNAVKR RVFSVVSRYK GQLAGWDVVN ENLHFSYFED KMGPKASYNI FKMAQAFDPT TTMFMNEYNT LEESSDSDSS LARYLQKLRE
401: IRSIRVCGNI SLGIGLESHF KTPNIPYMRS ALDTLAATGL PIWLTEVDVE APPNVQAKYF EQVLREGHAH PQVKGIVTWS GYSPSGCYRM CLTDGNFKNV
501: PTGDVVDKLL HEWGGFRRQT TGVTDADGYF EASLFHGDYD LKIAHPLTNS KASHSFKLTS DVSSSQNQPS SFVFRV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.