Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- vacuole 1
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G38650.1 | Thale cress | vacuole | 92.06 | 45.37 |
| PGSC0003DMT400021703 | Potato | mitochondrion | 59.93 | 43.8 |
| CDX90288 | Canola | endoplasmic reticulum, extracellular | 84.84 | 41.67 |
| Bra010733.1-P | Field mustard | endoplasmic reticulum, plasma membrane | 83.39 | 40.96 |
| PGSC0003DMT400031416 | Potato | cytosol, mitochondrion | 48.01 | 39.47 |
| KRH51408 | Soybean | extracellular | 72.56 | 36.48 |
| KRH60710 | Soybean | extracellular | 70.04 | 34.83 |
| Os05t0304900-01 | Rice | extracellular, vacuole | 61.37 | 34.41 |
| PGSC0003DMT400015813 | Potato | cytosol | 62.45 | 34.19 |
| CDY12095 | Canola | vacuole | 58.48 | 33.26 |
| PGSC0003DMT400059688 | Potato | cytosol, mitochondrion | 51.62 | 32.95 |
| GSMUA_Achr5P11430_001 | Banana | extracellular, vacuole | 64.98 | 31.58 |
| Solyc01g111340.2.1 | Tomato | extracellular | 61.37 | 31.08 |
| VIT_03s0038g02180.t01 | Wine grape | cytosol | 68.95 | 30.56 |
| Solyc11g040330.1.1 | Tomato | extracellular | 60.29 | 30.42 |
| TraesCS2A01G061600.1 | Wheat | extracellular, plasma membrane, vacuole | 59.93 | 29.86 |
| EES10525 | Sorghum | plasma membrane, vacuole | 59.57 | 28.75 |
| TraesCS2B01G075000.1 | Wheat | plastid | 59.57 | 28.65 |
| Zm00001d025082_P002 | Maize | endoplasmic reticulum, extracellular, plastid | 58.84 | 28.35 |
| HORVU2Hr1G011550.11 | Barley | plasma membrane, plastid, vacuole | 59.57 | 27.32 |
| Solyc10g055370.1.1 | Tomato | vacuole | 55.23 | 27.27 |
| AT4G33830.1 | Thale cress | vacuole | 42.96 | 20.66 |
| AT4G33860.1 | Thale cress | plasma membrane, vacuole | 40.43 | 19.44 |
| AT4G33840.1 | Thale cress | vacuole | 39.35 | 18.92 |
| AT2G14690.1 | Thale cress | vacuole | 37.55 | 18.25 |
| Solyc10g055340.1.1 | Tomato | cytosol | 14.44 | 18.18 |
| AT4G33810.3 | Thale cress | extracellular, vacuole | 36.46 | 17.75 |
| AT4G33820.1 | Thale cress | extracellular, vacuole | 36.1 | 17.54 |
| PGSC0003DMT400085040 | Potato | cytosol | 13.0 | 17.39 |
| AT4G08160.1 | Thale cress | cytosol | 39.71 | 14.63 |
| AT1G58370.2 | Thale cress | cytosol | 40.43 | 11.85 |
| AT1G10050.3 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 39.35 | 9.95 |
| TraesCS1D01G329900.1 | Wheat | peroxisome | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.20.20.80 | MapMan:35.1 | EntrezGene:829987 | ProteinID:AEE86911.1 | ArrayExpress:AT4G38300 | EnsemblPlantsGene:AT4G38300 |
| RefSeq:AT4G38300 | TAIR:AT4G38300 | RefSeq:AT4G38300-TAIR-G | EnsemblPlants:AT4G38300.1 | TAIR:AT4G38300.1 | ProteinID:CAB37486.1 |
| ProteinID:CAB80495.1 | InterPro:GH10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:Glycoside_hydrolase_SF | InterPro:IPR001000 | RefSeq:NP_195543.1 |
| PFAM:PF00331 | PO:PO:0000293 | PRINTS:PR00134 | PFscan:PS51760 | PANTHER:PTHR31490 | PANTHER:PTHR31490:SF3 |
| UniProt:Q9SVF5 | SMART:SM00633 | SUPFAM:SSF51445 | UniParc:UPI00000AA191 | : | : |
Description
Glycosyl hydrolase family 10 protein [Source:UniProtKB/TrEMBL;Acc:Q9SVF5]
Coordinates
chr4:-:17944556..17945491
Molecular Weight (calculated)
32105.2 Da
IEP (calculated)
6.319
GRAVY (calculated)
-0.334
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MWFPLNTHFQ ARKRAVTIHV SKENGESVEG AEVTVEQISK DFPIGSAISK TILGNIPYQE WFVKRFDATV FENELKWYAT ESDQGKLNYT LADKMMNLVR
101: ANRIIARGHN IFWEDPKYNP DWVRNLTGED LRSAVNRRIK SLMTRYRGEF VHWDVSNEML HFDFYESRLG KNVIDSLATL FFNDFNVVET CSDEKSTVDE
201: YIARVRELQR YDGIRMDGIG LEGHFTTPNV ALMRAILDKL ATLQLPIWLT EIDISSSLDH RSQVHKSLFS GLVQFAI
101: ANRIIARGHN IFWEDPKYNP DWVRNLTGED LRSAVNRRIK SLMTRYRGEF VHWDVSNEML HFDFYESRLG KNVIDSLATL FFNDFNVVET CSDEKSTVDE
201: YIARVRELQR YDGIRMDGIG LEGHFTTPNV ALMRAILDKL ATLQLPIWLT EIDISSSLDH RSQVHKSLFS GLVQFAI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.