Factsheet for GSMUA_Achr5P11430_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G38300.1	Thale cress	mitochondrion	31.58	64.98
PGSC0003DMT400021703	Potato	mitochondrion	40.88	61.48
KRH51408	Soybean	extracellular	58.77	60.8
PGSC0003DMT400015813	Potato	cytosol	53.33	60.08
KRH60710	Soybean	extracellular	58.25	59.6
CDX90288	Canola	endoplasmic reticulum, extracellular	58.42	59.04
Os05t0304900-01	Rice	extracellular, vacuole	51.05	58.91
Bra010733.1-P	Field mustard	endoplasmic reticulum, plasma membrane	58.25	58.87
AT4G38650.1	Thale cress	vacuole	57.37	58.19
Solyc01g111340.2.1	Tomato	extracellular	55.79	58.14
TraesCS2A01G061600.1	Wheat	extracellular, plasma membrane, vacuole	56.32	57.73
PGSC0003DMT400031416	Potato	cytosol, mitochondrion	33.51	56.68
CDY12095	Canola	vacuole	48.42	56.67
TraesCS2B01G075000.1	Wheat	plastid	57.19	56.6
EES10525	Sorghum	plasma membrane, vacuole	55.96	55.57
Solyc11g040330.1.1	Tomato	extracellular	53.51	55.56
VIT_03s0038g02180.t01	Wine grape	cytosol	60.7	55.36
PGSC0003DMT400059688	Potato	cytosol, mitochondrion	41.58	54.61
Zm00001d025082_P002	Maize	endoplasmic reticulum, extracellular, plastid	54.91	54.43
HORVU2Hr1G011550.11	Barley	plasma membrane, plastid, vacuole	56.84	53.64
TraesCS2D01G060800.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	56.84	52.34
Solyc10g055370.1.1	Tomato	vacuole	48.25	49.02
PGSC0003DMT400085040	Potato	cytosol	16.84	46.38
Solyc10g055340.1.1	Tomato	cytosol	17.37	45.0
GSMUA_Achr1P12500_001	Banana	extracellular, vacuole	36.84	36.91
GSMUA_Achr6P30170_001	Banana	cytosol	27.72	22.8
GSMUA_Achr9P09810_001	Banana	cytosol	27.89	22.71
GSMUA_Achr1P12520_001	Banana	mitochondrion	35.96	22.38
GSMUA_Achr1P12510_001	Banana	cytosol	35.26	20.98
GSMUA_Achr1P24570_001	Banana	cytosol	26.84	12.91

Protein Annotations

Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:35.1	InterPro:GH10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr5G11430_001
EnsemblPlants:GSMUA_Achr5P11430_001	EnsemblPlants:GSMUA_Achr5T11430_001	InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	InterPro:IPR008979
UniProt:M0SXM2	PFAM:PF00331	PRINTS:PR00134	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF3
SMART:SM00633	SUPFAM:SSF51445	UniParc:UPI0002951CA9	:	:	:

Description

glycosyl hydrolase family 10 protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G11430_001]

Coordinates

chr5:-:8191037..8193921

Molecular Weight (calculated)

63606.3 Da

IEP (calculated)

5.357

GRAVY (calculated)

-0.136

Length

570 amino acids

Sequence
(BLAST)

001: MGVVLLAPCC HSLLRSVHIS FCICTLYNLH ILVELIAVSA GAEGPGYDYS AYTECKYHPE APLYNGGVLV DRSGRIPVAY HKTETGVYAP AFLLYNLTET
101: TRYSFSCWVK AKGTGSALVR ATLSAEGSTL NCIGTVLARS GCWSFLKGGF VLDSFSRSSV LYLQDVDEKM TEISVASASL QPFSVEQWSM HQQDSIRTRR
201: KRAVTIHVSD EQGNLIGGAS VSIRQSSRDF PIGSAIANTI LGNKQYQEWF AERFNAAVFE NELKWYATEP EPGRLNYTLA DEMLEFVVSN QIIARGHNIF
301: WEDPIYTPSW VRKLSGDDLR AAVRSRIESL LSRYRGQFVH WDVSNEMLHF DFYEQRLGSN ASSEFFRTAQ QSDPLATLFM NEFNVVETCS DARSTVDSYI
401: SRLKELKNGG AVLEGIGLEG HFWRPNIPLM RAVLDKLSTL ELPIWLTEID ISKKVDAQEQ ALYLEEVLRE GFSHPSVGGI ILWTALHPNG CYQMCLTDQS
501: FGNLPTGDAV DELLKEWETT EGGLTDEHGQ YSFIGFLGEY KVSVVAGNKS TETSLFLSRG GETKHVTVHL

Best Arabidopsis Sequence Match ( AT4G38650.1 )
(BLAST)

001: MKCSSMCCLI LLALSLLTAF TLASSSNGID GPFYDSTAYT ECRAEAEKPL YNGGMLKDQK PSVPGKDSLT GIGAHYTPTY ILHNLTQNTI YCFSIWVKIE
101: AGAASAHVRA RLRADNATLN CVGSVTAKHG CWSFLKGGFL LDSPCKQSIL FFETSEDDGK IQLQVTSASL QPFTQEQWRN NQDYFINTAR KRAVTIHVSK
201: ENGESVEGAE VTVEQISKDF SIGSAISKTI LGNIPYQEWF VKRFDATVFE NELKWYATEP DQGKLNYTLA DKMMNFVRAN RIIARGHNIF WEDPKYNPDW
301: VRNLTGEDLR SAVNRRIKSL MTRYRGEFVH WDVSNEMLHF DFYETRLGKN ASYGFFAAAR EIDSLATLFF NDFNVVETCS DEKSTVDEYI ARVRELQRYD
401: GVRMDGIGLE GHFTTPNVAL MRAILDKLAT LQLPIWLTEI DISSSLDHRS QAIYLEQVLR EGFSHPSVNG IMLWTALHPN GCYQMCLTDD KFRNLPAGDV
501: VDQKLLEWKT GEVKATTDDH GSFSFFGFLG EYRVGIMYQG KTVNSSFSLS QGPETKHVRL QI

Arabidopsis Description

At4g38650 [Source:UniProtKB/TrEMBL;Acc:Q84VX1]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.