Factsheet for TraesCS2D01G060800.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome

Predictor Summary:

cytosol 1
mitochondrion 1
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, peroxisome
Any Predictor:	cytosol, endoplasmic reticulum, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G061600.1	Wheat	extracellular, plasma membrane, vacuole	88.21	98.2
TraesCS2B01G075000.1	Wheat	plastid	88.85	95.49
HORVU2Hr1G011550.11	Barley	plasma membrane, plastid, vacuole	87.72	89.9
Os05t0304900-01	Rice	extracellular, vacuole	66.72	83.6
EES10525	Sorghum	plasma membrane, vacuole	76.74	82.75
Zm00001d025082_P002	Maize	endoplasmic reticulum, extracellular, plastid	73.18	78.78
GSMUA_Achr5P11430_001	Banana	extracellular, vacuole	52.34	56.84
TraesCS4D01G227700.1	Wheat	plasma membrane, vacuole	49.43	54.55
TraesCS4D01G259500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	34.41	37.37
TraesCS4D01G259100.1	Wheat	vacuole	34.9	37.05
TraesCS1D01G107700.1	Wheat	extracellular, vacuole	34.09	36.76
TraesCS2D01G510500.1	Wheat	vacuole	31.66	34.15
TraesCS5D01G194800.1	Wheat	plasma membrane, vacuole	31.34	33.05
TraesCS5D01G448600.1	Wheat	cytosol	25.2	28.42
TraesCS5D01G449000.1	Wheat	cytosol	24.72	27.62
TraesCS3D01G041700.1	Wheat	cytosol	25.04	27.48
TraesCS5D01G448800.1	Wheat	cytosol	23.91	27.06
TraesCS3D01G041600.1	Wheat	extracellular, vacuole	25.2	24.15
TraesCS4D01G019500.1	Wheat	cytosol	27.14	23.11
TraesCS1D01G329900.1	Wheat	peroxisome	2.91	20.22
TraesCS2D01G124900.1	Wheat	mitochondrion	27.46	15.45

Protein Annotations

Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:35.1	InterPro:GH10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Galactose-bd-like_sf
InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	InterPro:IPR008979	PFAM:PF00331	PRINTS:PR00134	PFscan:PS51760
PANTHER:PTHR31490	PANTHER:PTHR31490:SF3	SMART:SM00633	SUPFAM:SSF49785	SUPFAM:SSF51445	EnsemblPlantsGene:TraesCS2D01G060800
EnsemblPlants:TraesCS2D01G060800.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:25163804..25168693

Molecular Weight (calculated)

68790.6 Da

IEP (calculated)

7.223

GRAVY (calculated)

-0.243

Length

619 amino acids

Sequence
(BLAST)

001: MVGAPTEHTH GDKERITGEL PARLRLLPAG RLPVLSTEQF LHLSHQVMEP AAASPLPPPP RTKPNNMLLL LPLLLLAASL APHGSSADGL RYDYKAYTEC
101: KGHPEPALYN GGILRWAKKI KDFRTADEGN YSPSFVLYNM SAGMAYSFSC WVKFNGPGTI HVKAKILSLD NAGSQCLGTA LVRNDCWSFL KGGFTLNSPS
201: QTSVLYFQAA TANASMVSIR SASLQPFSPE QWSQHREDRI QLIRKRFVNV HVSDSSGGRV VGAKVAVRQM SRDFPFGSAI SKTILGNKPY QDWFRKRFNA
301: AVFENELKWY ATEPAPGKED YALADQLLQF VQSSDAVARG HNIFWEDPKY TPWWVKNLTS ADQLRAAVAG RIESLLSRYK GDFVHWDVSN EMLHFDFYES
401: RLGRNATTDF FRTAKRADPL ATLFLNDFNV VEVCDDLSSS ADSYVSRLRQ LADAGVTFEG IGLEAHFGKP NIPYVRAVLD KLGTLRLPIW LTEVDISNAL
501: DPKTQAAYLE EVLREGFAHP SVDGIMLWTA MDASAACYQM CLTDGNFTNL PAGDVVDRLL GEWQTREVLG ATNDRGSFNF SAFLGEYKLS VTYLNSSAEG
601: TFSLARSDDT KHITIRLQP

Best Arabidopsis Sequence Match ( AT4G38650.1 )
(BLAST)

001: MKCSSMCCLI LLALSLLTAF TLASSSNGID GPFYDSTAYT ECRAEAEKPL YNGGMLKDQK PSVPGKDSLT GIGAHYTPTY ILHNLTQNTI YCFSIWVKIE
101: AGAASAHVRA RLRADNATLN CVGSVTAKHG CWSFLKGGFL LDSPCKQSIL FFETSEDDGK IQLQVTSASL QPFTQEQWRN NQDYFINTAR KRAVTIHVSK
201: ENGESVEGAE VTVEQISKDF SIGSAISKTI LGNIPYQEWF VKRFDATVFE NELKWYATEP DQGKLNYTLA DKMMNFVRAN RIIARGHNIF WEDPKYNPDW
301: VRNLTGEDLR SAVNRRIKSL MTRYRGEFVH WDVSNEMLHF DFYETRLGKN ASYGFFAAAR EIDSLATLFF NDFNVVETCS DEKSTVDEYI ARVRELQRYD
401: GVRMDGIGLE GHFTTPNVAL MRAILDKLAT LQLPIWLTEI DISSSLDHRS QAIYLEQVLR EGFSHPSVNG IMLWTALHPN GCYQMCLTDD KFRNLPAGDV
501: VDQKLLEWKT GEVKATTDDH GSFSFFGFLG EYRVGIMYQG KTVNSSFSLS QGPETKHVRL QI

Arabidopsis Description

At4g38650 [Source:UniProtKB/TrEMBL;Acc:Q84VX1]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.