Factsheet for TraesCS5D01G449000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
vacuole 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, vacuole
iPSORT:	plastid
MultiLoc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G441700.1	Wheat	cytosol	86.46	87.57
TraesCS5B01G445700.1	Wheat	extracellular, plastid, vacuole	90.97	86.9
TraesCS5D01G448800.1	Wheat	cytosol	81.77	82.82
TraesCS5D01G448600.1	Wheat	cytosol	81.95	82.7
TraesCS1D01G329900.1	Wheat	peroxisome	12.82	79.78
Os05t0319900-00	Rice	cytosol, mitochondrion, plastid, vacuole	29.24	72.32
TraesCS3D01G041700.1	Wheat	cytosol	64.44	63.3
Zm00001d016558_P001	Maize	plastid	44.77	57.41
KXG30265	Sorghum	plastid	62.09	53.75
TraesCS3D01G041600.1	Wheat	extracellular, vacuole	55.05	47.21
TraesCS4D01G019500.1	Wheat	cytosol	46.75	35.63
TraesCS4D01G227700.1	Wheat	plasma membrane, vacuole	29.42	29.06
TraesCS4D01G259100.1	Wheat	vacuole	29.06	27.62
TraesCS4D01G259500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	27.8	27.02
TraesCS2D01G510500.1	Wheat	vacuole	27.44	26.48
TraesCS5D01G194800.1	Wheat	plasma membrane, vacuole	27.26	25.72
TraesCS1D01G107700.1	Wheat	extracellular, vacuole	26.35	25.44
TraesCS2D01G060800.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	27.62	24.72
TraesCS2D01G124900.1	Wheat	mitochondrion	47.65	24.0

Protein Annotations

Gene3D:2.60.120.260	MapMan:21.2.2.2.4	Gene3D:3.20.20.80	InterPro:CenC_carb-bd	InterPro:GH10	InterPro:GH10_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016798	InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	InterPro:IPR008979
PFAM:PF00331	PFAM:PF02018	ScanProsite:PS00591	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF17
SMART:SM00633	SUPFAM:SSF49785	SUPFAM:SSF51445	EnsemblPlantsGene:TraesCS5D01G449000	EnsemblPlants:TraesCS5D01G449000.1	SEG:seg

Description

No Description!

Coordinates

chr5D:-:498289398..498291253

Molecular Weight (calculated)

60747.7 Da

IEP (calculated)

4.768

GRAVY (calculated)

-0.255

Length

554 amino acids

Sequence
(BLAST)

001: MAGTPDVNLD GSLITGCTPF GSRTTTLSLH NEEETAIAAG NGDGNEPSGR YILVAGRADE KDGLRQTIAG GVLKPGITYR VAGWIGLGAG AARGTSHPVR
101: VNLGVTMDDD DNESLQVECG AVCAEAGGWT EIMGAFRLRT EPRGAALYVH GGPAGVGVKV MDLRVFQTDR EARFRQLKDK TDQARKRDVI LKLGAATGAA
201: SVRVVQMDNS FPFGTCINTT VIQNPAFLDF FTNHFDWAVF ENELKWYHTE AQQGQLNYAD ADALLALCDR LRKRVRGHCV FWSVDGDVQQ WVKNLGKDEL
301: KSAVQSRLEG LVSRYAGKFP HYDVNNEMLH GQFFRDRLAD EDVPAFMFKE VARLDPEPAL FVNDFNVECG NDPNATPEKY AEQVAWLESC GAVVGGIGLQ
401: GHVQNPVGEV ICAALDRLAT TGVPIWFTEL DVSEPDVSLR AKDLEVVLRE AYAHPAVEGV VLWGFMQNTM WRQDAWLVDA DGTVNEAGQM FLNLQREWKT
501: DVRGNADGDG NFKFRGFHGR YFVEVTTATG CRMLKTFTVE KGDNTPLLVD LGDA

Best Arabidopsis Sequence Match ( AT1G10050.1 )
(BLAST)

0001: MADLNIVMNG DFFAGIEPWY PNGCEAFVVS SDPFSSEVMS ADSSSGGYVV VTNRKETWQG LEQDITTRVA SGMNYTVSTC VGVSGPFNES AEVLSTVRLE
0101: HEDSPTEYLC IGKTYASRDK WVDLEGTFSI SNMPDRVVLY LEGPAPGKDL LIRSVTVRSS TSSDFQETEK NTDASNVFPL ALNIIKNHDF SDGLYSWNTN
0201: GCDSFVVSSN DCNLESNAVV NNRSETWQGL EQDITDNVSP GFSYKVSASV SVSGPVLGSA QVLATLKLEH KSSATEFQLI GKTYASKDIW KTLEGTFEVS
0301: GRPDRVVFFL EGPPPGIDLL VKSVTIHCES DNQFERSREF CSAPESDNHI FLNSSFSDGL NHWSGRGCNL MLHESLADGK ILPDSGTCFA SASERTHKWS
0401: GIEQDITERV QRKLIYEASS VVRLSHSHHT VQATLYVQYL DQREEYIGIS SVQGTHDDWV ELKGKFLLNG SPARAVVYIE GPPPGIDVFV DHFAVKPAEK
0501: ETPSGRPYIE SHAFGMNIVS NSHLSDGTIE GWFPLGDCHL KVGDGSPRIL PPLARDSLRK TQGYLSGRYV LATNRSGTWM GPAQTITDKV KLFVTYQVSA
0601: WVKIGSGGRT SPQDVNIALS VDGNWVNGGK VEVDDGDWHE VVGSFRIEKE AKEVMLHVQG PSPGVDLMVA GLQIFAVDRK ARLSYLRGQA DVVRKRNVCL
0701: KFSGLDPSEL SGATVKIRQT RNSFPLGSCI SRSNIDNEDF VDFFLNNFDW AVFGYELKWY WTEPEQGNFN YRDANEMIEF CERYNIKTRG HCIFWEVESA
0801: IQPWVQQLTG SKLEAAVENR VTDLLTRYNG KFRHYDVNNE MLHGSFYRDR LDSDARANMF KTAHELDPLA TLFLNEYHIE DGFDSRSSPE KYIKLVHKLQ
0901: KKGAPVGGIG IQGHITSPVG HIVRSALDKL STLGLPIWFT ELDVSSTNEH IRGDDLEVML WEAFAHPAVE GVMLWGFWEL FMSREHSHLV NADGEVNEAG
1001: KRFLEIKREW LSFVDGEIED GGGLEFRGYH GSYTVEVVTS ESKYVTNFVV DKGNSPVDVI IDL

Arabidopsis Description

glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G10050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.