Factsheet for Os05t0319900-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, vacuole, cytosol

Predictor Summary:

nucleus 1
vacuole 1
plastid 2
extracellular 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0134800-01	Rice	extracellular, mitochondrion, vacuole	66.96	40.76
Zm00001d016558_P001	Maize	plastid	65.62	34.03
Os01t0134900-01	Rice	extracellular	76.79	30.88
HORVU5Hr1G106250.2	Barley	cytosol, mitochondrion, vacuole	70.98	30.58
TraesCS5D01G448600.1	Wheat	cytosol	72.77	29.69
TraesCS5B01G445300.1	Wheat	cytosol	72.77	29.64
TraesCS5A01G441700.1	Wheat	cytosol	72.32	29.62
TraesCS5A01G441400.1	Wheat	cytosol	72.77	29.42
TraesCS5D01G449000.1	Wheat	cytosol	72.32	29.24
TraesCS5A01G441600.1	Wheat	cytosol	71.43	29.14
HORVU5Hr1G106280.1	Barley	cytosol, extracellular, vacuole	70.54	28.83
TraesCS5B01G445500.1	Wheat	cytosol	70.09	28.6
TraesCS5D01G448800.1	Wheat	cytosol	69.2	28.34
HORVU5Hr1G106270.1	Barley	extracellular, vacuole	70.98	28.24
HORVU5Hr1G106210.1	Barley	cytosol, extracellular	70.98	28.04
TraesCS5B01G445700.1	Wheat	extracellular, plastid, vacuole	71.88	27.76
KXG30265	Sorghum	plastid	76.79	26.88
Os03t0243700-01	Rice	cytosol	37.5	20.79
Os03t0672900-00	Rice	extracellular	61.16	18.12
Os05t0304900-01	Rice	extracellular, vacuole	33.48	15.18
Os03t0201901-00	Rice	cytosol	30.8	12.11
Os03t0201500-01	Rice	vacuole	30.8	12.02
Os10t0351600-00	Rice	cytosol	30.36	11.58
Os10t0351700-01	Rice	plasma membrane	29.46	11.36
Os07t0456700-01	Rice	plasma membrane	55.8	11.35
Os03t0201800-01	Rice	extracellular	28.57	11.0
HORVU5Hr1G106260.1	Barley	cytosol	8.04	4.99

Protein Annotations

Gene3D:3.20.20.80	MapMan:35.1	UniProt:A0A0P0WKS5	ProteinID:BAS93352.1	InterPro:GH10	InterPro:GH10_AS
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	EnsemblPlantsGene:Os05g0319900	EnsemblPlants:Os05t0319900-00	PFAM:PF00331
ScanProsite:PS00591	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF17	SUPFAM:SSF51445	UniParc:UPI000393BE3C
SEG:seg	:	:	:	:	:

Description

Similar to Endo-1,4-beta-xylanase. (Os05t0319900-00)

Coordinates

chr5:-:14854444..14855118

Molecular Weight (calculated)

24380.8 Da

IEP (calculated)

4.634

GRAVY (calculated)

-0.133

Length

224 amino acids

Sequence
(BLAST)

001: MLHGRFYRDR LGDDAAALMF REAARLDPAA RLFVNDYNVE CANDPNATPE KYIELIDALR RGGAAVGGVG IQGHVSNPSG EVICGALDKL AASTGLPIWI
101: TELDVSEPDV SLRADDLEVV LREAYAHPAV AGVVLWGFMQ GRMWRQDASL VDADGTVNEA GQRLVNLRRE WTSDARGTID GDGHFTFRGY HGTYVVQVTT
201: ATGKILKTFT VDKGDTSLVL DMEI

Best Arabidopsis Sequence Match ( AT4G08160.1 )
(BLAST)

001: MEKNTNTNHT SDDNNDKNHT NEEQEKIILN PNFEDGLNNW TGRACKIVLH ESMDSGKIVP LSGKVFAAAT QRKDTWNGIQ QEISGRFRRK RVYEVTAVVR
101: IFGNNVTSAT VQATLWVLNA NKREQYIVIA NVQATDKNWV ELKGKFVIHG SPSRVILYLE GPPPRADILL NSLVVQHAKR NRPSPPPFYE NPGFGVNIVE
201: NSEVLDGGTK PWFTLGNCKL SVGQGAPRTL PPMARDTLGP HKPLGGNYIV VTNRTQTWMG PAQMITDKIK LFLTYQISAW VKLGVGVSGS SMSPQNVNIA
301: LSVDNQWVNG GQVEVTVGDT WHEIAGSFRL EKQPQNVMVY VQGPGAGIDL MIAALQIFPV DRRERVRCLK RQVDEVRKRD IVLKFSGLND DESFDLFPYI
401: VKVKQTYNSF PVGTCINRTD IDNEDFVDFF TKNFNWAVFG NELKWYATEA ERGKVNYQDA DDMLDLCIGN NINVRGHCIF WEVESTVQPW VRQLNKTDLM
501: NAVQKRLTDL LTRYKGKFKH YDVNNEMLHG SFYQDRLGKG VRALMFNIAH KLDPSPLLFV NDYHVEDGDD PRSSPEKYIK LVLDLEAQGA TVGGIGIQGH
601: IDSPVGAIVC SALDMLSVLG RPIWFTELDV SSSNEYVRGE DLEVMLWEAF AHPSVEGIML WGFWELSMSR ENANLVEGEG EVNEAGKRFL EVKQEWLSHA
701: YGIINDESEF TFRGYHGTYA VEICTPAGIV LKTFVVEKGD TPLVISIDLS SL

Arabidopsis Description

Glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JG10]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.