Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G441400.1 | Wheat | cytosol | 94.0 | 93.32 |
| TraesCS5D01G448600.1 | Wheat | cytosol | 91.45 | 91.62 |
| HORVU5Hr1G106210.1 | Barley | cytosol, extracellular | 87.27 | 84.66 |
| HORVU5Hr1G106270.1 | Barley | extracellular, vacuole | 85.27 | 83.3 |
| TraesCS5B01G445500.1 | Wheat | cytosol | 81.27 | 81.42 |
| TraesCS5B01G445700.1 | Wheat | extracellular, plastid, vacuole | 82.36 | 78.1 |
| Os05t0319900-00 | Rice | cytosol, mitochondrion, plastid, vacuole | 29.64 | 72.77 |
| HORVU5Hr1G106260.1 | Barley | cytosol | 43.09 | 65.65 |
| Zm00001d016558_P001 | Maize | plastid | 46.18 | 58.8 |
| KXG30265 | Sorghum | plastid | 65.09 | 55.94 |
| TraesCS3B01G045600.1 | Wheat | mitochondrion | 65.45 | 55.38 |
| TraesCS3B01G045700.2 | Wheat | vacuole | 56.36 | 50.0 |
| TraesCS4B01G021800.1 | Wheat | cytosol | 48.0 | 36.31 |
| TraesCS4B01G227000.1 | Wheat | vacuole | 30.0 | 29.41 |
| TraesCS4B01G259100.1 | Wheat | vacuole | 28.0 | 27.02 |
| TraesCS4B01G259400.1 | Wheat | vacuole | 28.55 | 26.93 |
| TraesCS2B01G075000.1 | Wheat | plastid | 27.82 | 26.56 |
| TraesCS1B01G124500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 26.18 | 25.09 |
| TraesCS2B01G537100.1 | Wheat | vacuole | 26.0 | 24.91 |
| TraesCS2B01G144300.3 | Wheat | mitochondrion | 48.18 | 23.45 |
Protein Annotations
| Gene3D:2.60.120.260 | MapMan:21.2.2.2.4 | Gene3D:3.20.20.80 | InterPro:CenC_carb-bd | InterPro:GH10 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 |
| GO:GO:0016798 | InterPro:Galactose-bd-like_sf | InterPro:Glycoside_hydrolase_SF | InterPro:IPR001000 | InterPro:IPR008979 | PFAM:PF00331 |
| PFAM:PF02018 | PFscan:PS51760 | PANTHER:PTHR31490 | PANTHER:PTHR31490:SF17 | SMART:SM00633 | SUPFAM:SSF49785 |
| SUPFAM:SSF51445 | EnsemblPlantsGene:TraesCS5B01G445300 | EnsemblPlants:TraesCS5B01G445300.1 | : | : | : |
Description
No Description!
Coordinates
chr5B:-:617291435..617293284
Molecular Weight (calculated)
60777.0 Da
IEP (calculated)
5.683
GRAVY (calculated)
-0.290
Length
550 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSTQDVNLI HNSTLEDGCA PFGSRTTTLS MHNEEETAML PVTVGGSKPS GRYILVAGRA DEKDGLRQPI TSGGLKPRVT YRVAGWIRLG AGAPRGTVRI
101: SLGVDDNGNE TMVECGAVCA ETGGWTEIMG AFRLRTEPRS AAVYVHGATA GVDVKVMDLR VFQTDRKARF RQLKDKTDKA RKRDVVIKLG AATGAASVRV
201: VQMDSAFPFG TCINTTVIQN PAFVDFFTNH LDWAVFENEL KWYHTEAQQG QLNYRDADAL LDFCDRLGKR ARGHCVFWSA DGAVQQWVKN LDRDQLRSAV
301: QSRIQSLVSR YAGRFPHYDV NNEMLHGRFF RDRLGDEDVP AFMFKEVARL DPEAALFVND YNVECANDPN ATPDKYAEQV TWLQSCGAVV RGIGLQGHIS
401: NPVGEVVCGA LDRLAVTGVP VWFTELDVCE PDVGLRAQDL EVVLREAYAH PAVEGVVFWG IMQGKMWRKD AWLVDADGTV NEAGQTLLNL QEEWKTDTRG
501: NVDGDGNFKF RGFHGRYVVE VTTATGKQML KTFTVEKGDN TPLVLDLVDA
101: SLGVDDNGNE TMVECGAVCA ETGGWTEIMG AFRLRTEPRS AAVYVHGATA GVDVKVMDLR VFQTDRKARF RQLKDKTDKA RKRDVVIKLG AATGAASVRV
201: VQMDSAFPFG TCINTTVIQN PAFVDFFTNH LDWAVFENEL KWYHTEAQQG QLNYRDADAL LDFCDRLGKR ARGHCVFWSA DGAVQQWVKN LDRDQLRSAV
301: QSRIQSLVSR YAGRFPHYDV NNEMLHGRFF RDRLGDEDVP AFMFKEVARL DPEAALFVND YNVECANDPN ATPDKYAEQV TWLQSCGAVV RGIGLQGHIS
401: NPVGEVVCGA LDRLAVTGVP VWFTELDVCE PDVGLRAQDL EVVLREAYAH PAVEGVVFWG IMQGKMWRKD AWLVDADGTV NEAGQTLLNL QEEWKTDTRG
501: NVDGDGNFKF RGFHGRYVVE VTTATGKQML KTFTVEKGDN TPLVLDLVDA
0001: MADLNIVMNG DFFAGIEPWY PNGCEAFVVS SDPFSSEVMS ADSSSGGYVV VTNRKETWQG LEQDITTRVA SGMNYTVSTC VGVSGPFNES AEVLSTVRLE
0101: HEDSPTEYLC IGKTYASRDK WVDLEGTFSI SNMPDRVVLY LEGPAPGKDL LIRSVTVRSS TSSDFQETEK NTDASNVFPL ALNIIKNHDF SDGLYSWNTN
0201: GCDSFVVSSN DCNLESNAVV NNRSETWQGL EQDITDNVSP GFSYKVSASV SVSGPVLGSA QVLATLKLEH KSSATEFQLI GKTYASKDIW KTLEGTFEVS
0301: GRPDRVVFFL EGPPPGIDLL VKSVTIHCES DNQFERSREF CSAPESDNHI FLNSSFSDGL NHWSGRGCNL MLHESLADGK ILPDSGTCFA SASERTHKWS
0401: GIEQDITERV QRKLIYEASS VVRLSHSHHT VQATLYVQYL DQREEYIGIS SVQGTHDDWV ELKGKFLLNG SPARAVVYIE GPPPGIDVFV DHFAVKPAEK
0501: ETPSGRPYIE SHAFGMNIVS NSHLSDGTIE GWFPLGDCHL KVGDGSPRIL PPLARDSLRK TQGYLSGRYV LATNRSGTWM GPAQTITDKV KLFVTYQVSA
0601: WVKIGSGGRT SPQDVNIALS VDGNWVNGGK VEVDDGDWHE VVGSFRIEKE AKEVMLHVQG PSPGVDLMVA GLQIFAVDRK ARLSYLRGQA DVVRKRNVCL
0701: KFSGLDPSEL SGATVKIRQT RNSFPLGSCI SRSNIDNEDF VDFFLNNFDW AVFGYELKWY WTEPEQGNFN YRDANEMIEF CERYNIKTRG HCIFWEVESA
0801: IQPWVQQLTG SKLEAAVENR VTDLLTRYNG KFRHYDVNNE MLHGSFYRDR LDSDARANMF KTAHELDPLA TLFLNEYHIE DGFDSRSSPE KYIKLVHKLQ
0901: KKGAPVGGIG IQGHITSPVG HIVRSALDKL STLGLPIWFT ELDVSSTNEH IRGDDLEVML WEAFAHPAVE GVMLWGFWEL FMSREHSHLV NADGEVNEAG
1001: KRFLEIKREW LSFVDGEIED GGGLEFRGYH GSYTVEVVTS ESKYVTNFVV DKGNSPVDVI IDL
0101: HEDSPTEYLC IGKTYASRDK WVDLEGTFSI SNMPDRVVLY LEGPAPGKDL LIRSVTVRSS TSSDFQETEK NTDASNVFPL ALNIIKNHDF SDGLYSWNTN
0201: GCDSFVVSSN DCNLESNAVV NNRSETWQGL EQDITDNVSP GFSYKVSASV SVSGPVLGSA QVLATLKLEH KSSATEFQLI GKTYASKDIW KTLEGTFEVS
0301: GRPDRVVFFL EGPPPGIDLL VKSVTIHCES DNQFERSREF CSAPESDNHI FLNSSFSDGL NHWSGRGCNL MLHESLADGK ILPDSGTCFA SASERTHKWS
0401: GIEQDITERV QRKLIYEASS VVRLSHSHHT VQATLYVQYL DQREEYIGIS SVQGTHDDWV ELKGKFLLNG SPARAVVYIE GPPPGIDVFV DHFAVKPAEK
0501: ETPSGRPYIE SHAFGMNIVS NSHLSDGTIE GWFPLGDCHL KVGDGSPRIL PPLARDSLRK TQGYLSGRYV LATNRSGTWM GPAQTITDKV KLFVTYQVSA
0601: WVKIGSGGRT SPQDVNIALS VDGNWVNGGK VEVDDGDWHE VVGSFRIEKE AKEVMLHVQG PSPGVDLMVA GLQIFAVDRK ARLSYLRGQA DVVRKRNVCL
0701: KFSGLDPSEL SGATVKIRQT RNSFPLGSCI SRSNIDNEDF VDFFLNNFDW AVFGYELKWY WTEPEQGNFN YRDANEMIEF CERYNIKTRG HCIFWEVESA
0801: IQPWVQQLTG SKLEAAVENR VTDLLTRYNG KFRHYDVNNE MLHGSFYRDR LDSDARANMF KTAHELDPLA TLFLNEYHIE DGFDSRSSPE KYIKLVHKLQ
0901: KKGAPVGGIG IQGHITSPVG HIVRSALDKL STLGLPIWFT ELDVSSTNEH IRGDDLEVML WEAFAHPAVE GVMLWGFWEL FMSREHSHLV NADGEVNEAG
1001: KRFLEIKREW LSFVDGEIED GGGLEFRGYH GSYTVEVVTS ESKYVTNFVV DKGNSPVDVI IDL
Arabidopsis Description
glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G10050]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.