Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G019500.1 | Wheat | cytosol | 98.35 | 98.35 |
| TraesCS4A01G292300.1 | Wheat | cytosol | 97.8 | 96.47 |
| HORVU4Hr1G003220.3 | Barley | cytosol | 96.15 | 94.72 |
| EER93683 | Sorghum | cytosol | 84.73 | 82.35 |
| Zm00001d013561_P001 | Maize | extracellular | 84.73 | 82.35 |
| Os03t0672900-00 | Rice | extracellular | 80.19 | 77.12 |
| TraesCS5B01G445300.1 | Wheat | cytosol | 36.31 | 48.0 |
| TraesCS5B01G445500.1 | Wheat | cytosol | 35.9 | 47.54 |
| TraesCS5B01G445700.1 | Wheat | extracellular, plastid, vacuole | 37.14 | 46.55 |
| TraesCS3B01G045700.2 | Wheat | vacuole | 37.28 | 43.71 |
| TraesCS3B01G045600.1 | Wheat | mitochondrion | 38.93 | 43.54 |
| TraesCS2B01G144300.3 | Wheat | mitochondrion | 52.96 | 34.07 |
| TraesCS4B01G227000.1 | Wheat | vacuole | 24.76 | 32.09 |
| TraesCS4B01G259100.1 | Wheat | vacuole | 23.52 | 30.0 |
| TraesCS2B01G075000.1 | Wheat | plastid | 22.97 | 28.99 |
| TraesCS2B01G537100.1 | Wheat | vacuole | 22.56 | 28.57 |
| TraesCS4B01G259400.1 | Wheat | vacuole | 22.15 | 27.62 |
| TraesCS1B01G124500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 21.05 | 26.66 |
Protein Annotations
| Gene3D:2.60.120.260 | MapMan:21.2.2.2.4 | Gene3D:3.20.20.80 | InterPro:CenC_carb-bd | ncoils:Coil | InterPro:GH10 |
| InterPro:GH10_AS | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016787 | GO:GO:0016798 | InterPro:Galactose-bd-like_sf | InterPro:Glycoside_hydrolase_SF | InterPro:IPR001000 |
| InterPro:IPR008979 | PFAM:PF00331 | PFAM:PF02018 | PRINTS:PR00134 | ScanProsite:PS00591 | PFscan:PS51760 |
| PANTHER:PTHR31490 | PANTHER:PTHR31490:SF15 | SMART:SM00633 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | EnsemblPlantsGene:TraesCS4B01G021800 |
| EnsemblPlants:TraesCS4B01G021800.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr4B:+:15751607..15754127
Molecular Weight (calculated)
80441.7 Da
IEP (calculated)
5.321
GRAVY (calculated)
-0.216
Length
727 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIADDNIIL NPEFDGGLDG WSGSGCKIEL HDSLDDGKVL PATGKYFVAA TGRTDTWNGV MQDVTARLQR KTAYEVAATV RLSGANVSPC EVRATLAVQT
101: ADSRQQYIAV GKLQASDKDW AQLQGKFLLN STVAKATIYV EGPKAGVDLL LDCLVVKHAQ KAPPCSPPDF QNLEYGANII QNSNLDDGLN CWFPLGPCAL
201: AVRDGSPRVL PPMAQESLAL DDEPLNGKHI HVTGRTQTWM GPAQIITDKL TLHATYQVSA WVRVAGQMSG PQNINIAVAV DSQWLNGGQV LARDERWYEI
301: GGSFRVEAKP ASRVMVYVQG PDAGLDLMVA GFQVFPVDRK ARVKHLRKIT DKVRKRDVVV KLTGADGAVV QSAECVEVRV RQVSNSFPLG ACIMRTNMDN
401: EDFVDFFTKN FNWAVFGNEL KWYWTEPQRG QVNYADADDL LKLCSDNGMC VRGHCIFWEV DNMVQQWVKT LSTDDLSAAV KSRIDGLLTR YKGKFRHYDV
501: NNEMLHGSFY QDKLGKDIRA TMFKTANELD PDALLFVNDY NVEGMCDIRA TPEAYIEQII GLQEQGAPVS GVGLQGHVSN PVGPVIRNVL DRLAVLGLPL
601: WFTELDVSAA NEYVRADDLE VMLREAYAHP AVEGVMLWGF WELFMSRDSA HLVNAEGDIN EAGRRLLQLK KEWLTHAHGH ADENGEFKFR GHHGAYHVDV
701: VTATGCKITQ EFAVDKDDSP MVLNINV
101: ADSRQQYIAV GKLQASDKDW AQLQGKFLLN STVAKATIYV EGPKAGVDLL LDCLVVKHAQ KAPPCSPPDF QNLEYGANII QNSNLDDGLN CWFPLGPCAL
201: AVRDGSPRVL PPMAQESLAL DDEPLNGKHI HVTGRTQTWM GPAQIITDKL TLHATYQVSA WVRVAGQMSG PQNINIAVAV DSQWLNGGQV LARDERWYEI
301: GGSFRVEAKP ASRVMVYVQG PDAGLDLMVA GFQVFPVDRK ARVKHLRKIT DKVRKRDVVV KLTGADGAVV QSAECVEVRV RQVSNSFPLG ACIMRTNMDN
401: EDFVDFFTKN FNWAVFGNEL KWYWTEPQRG QVNYADADDL LKLCSDNGMC VRGHCIFWEV DNMVQQWVKT LSTDDLSAAV KSRIDGLLTR YKGKFRHYDV
501: NNEMLHGSFY QDKLGKDIRA TMFKTANELD PDALLFVNDY NVEGMCDIRA TPEAYIEQII GLQEQGAPVS GVGLQGHVSN PVGPVIRNVL DRLAVLGLPL
601: WFTELDVSAA NEYVRADDLE VMLREAYAHP AVEGVMLWGF WELFMSRDSA HLVNAEGDIN EAGRRLLQLK KEWLTHAHGH ADENGEFKFR GHHGAYHVDV
701: VTATGCKITQ EFAVDKDDSP MVLNINV
001: MEKNTNTNHT SDDNNDKNHT NEEQEKIILN PNFEDGLNNW TGRACKIVLH ESMDSGKIVP LSGKVFAAAT QRKDTWNGIQ QEISGRFRRK RVYEVTAVVR
101: IFGNNVTSAT VQATLWVLNA NKREQYIVIA NVQATDKNWV ELKGKFVIHG SPSRVILYLE GPPPRADILL NSLVVQHAKR NRPSPPPFYE NPGFGVNIVE
201: NSEVLDGGTK PWFTLGNCKL SVGQGAPRTL PPMARDTLGP HKPLGGNYIV VTNRTQTWMG PAQMITDKIK LFLTYQISAW VKLGVGVSGS SMSPQNVNIA
301: LSVDNQWVNG GQVEVTVGDT WHEIAGSFRL EKQPQNVMVY VQGPGAGIDL MIAALQIFPV DRRERVRCLK RQVDEVRKRD IVLKFSGLND DESFDLFPYI
401: VKVKQTYNSF PVGTCINRTD IDNEDFVDFF TKNFNWAVFG NELKWYATEA ERGKVNYQDA DDMLDLCIGN NINVRGHCIF WEVESTVQPW VRQLNKTDLM
501: NAVQKRLTDL LTRYKGKFKH YDVNNEMLHG SFYQDRLGKG VRALMFNIAH KLDPSPLLFV NDYHVEDGDD PRSSPEKYIK LVLDLEAQGA TVGGIGIQGH
601: IDSPVGAIVC SALDMLSVLG RPIWFTELDV SSSNEYVRGE DLEVMLWEAF AHPSVEGIML WGFWELSMSR ENANLVEGEG EVNEAGKRFL EVKQEWLSHA
701: YGIINDESEF TFRGYHGTYA VEICTPAGIV LKTFVVEKGD TPLVISIDLS SL
101: IFGNNVTSAT VQATLWVLNA NKREQYIVIA NVQATDKNWV ELKGKFVIHG SPSRVILYLE GPPPRADILL NSLVVQHAKR NRPSPPPFYE NPGFGVNIVE
201: NSEVLDGGTK PWFTLGNCKL SVGQGAPRTL PPMARDTLGP HKPLGGNYIV VTNRTQTWMG PAQMITDKIK LFLTYQISAW VKLGVGVSGS SMSPQNVNIA
301: LSVDNQWVNG GQVEVTVGDT WHEIAGSFRL EKQPQNVMVY VQGPGAGIDL MIAALQIFPV DRRERVRCLK RQVDEVRKRD IVLKFSGLND DESFDLFPYI
401: VKVKQTYNSF PVGTCINRTD IDNEDFVDFF TKNFNWAVFG NELKWYATEA ERGKVNYQDA DDMLDLCIGN NINVRGHCIF WEVESTVQPW VRQLNKTDLM
501: NAVQKRLTDL LTRYKGKFKH YDVNNEMLHG SFYQDRLGKG VRALMFNIAH KLDPSPLLFV NDYHVEDGDD PRSSPEKYIK LVLDLEAQGA TVGGIGIQGH
601: IDSPVGAIVC SALDMLSVLG RPIWFTELDV SSSNEYVRGE DLEVMLWEAF AHPSVEGIML WGFWELSMSR ENANLVEGEG EVNEAGKRFL EVKQEWLSHA
701: YGIINDESEF TFRGYHGTYA VEICTPAGIV LKTFVVEKGD TPLVISIDLS SL
Arabidopsis Description
Glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JG10]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.