Factsheet for TraesCS4B01G227000.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G227700.1	Wheat	plasma membrane, vacuole	97.15	97.15
TraesCS4A01G071100.2	Wheat	vacuole	96.79	96.79
Os03t0243700-01	Rice	cytosol	63.46	88.12
EER95184	Sorghum	vacuole	84.31	84.46
HORVU4Hr1G063790.23	Barley	vacuole	84.85	83.8
Zm00001d028398_P003	Maize	golgi, vacuole	83.42	82.54
TraesCS2B01G075000.1	Wheat	plastid	54.55	53.12
TraesCS4B01G259100.1	Wheat	vacuole	37.79	37.19
TraesCS4B01G259400.1	Wheat	vacuole	38.5	37.05
TraesCS2B01G537100.1	Wheat	vacuole	36.36	35.54
TraesCS1B01G124500.1	Wheat	endoplasmic reticulum, extracellular, vacuole	35.47	34.67
TraesCS5B01G445300.1	Wheat	cytosol	29.41	30.0
TraesCS5B01G445500.1	Wheat	cytosol	28.52	29.14
TraesCS5B01G445700.1	Wheat	extracellular, plastid, vacuole	28.52	27.59
TraesCS3B01G045700.2	Wheat	vacuole	28.88	26.13
TraesCS3B01G045600.1	Wheat	mitochondrion	29.23	25.23
TraesCS4B01G021800.1	Wheat	cytosol	32.09	24.76
TraesCS2B01G144300.3	Wheat	mitochondrion	31.91	15.84

Protein Annotations

Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:35.1	InterPro:GH10	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Galactose-bd-like_sf
InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	InterPro:IPR008979	PFAM:PF00331	PRINTS:PR00134	PFscan:PS51760
PANTHER:PTHR31490	PANTHER:PTHR31490:SF21	SMART:SM00633	SUPFAM:SSF51445	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS4B01G227000
EnsemblPlants:TraesCS4B01G227000.1	:	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:475192893..475195626

Molecular Weight (calculated)

62703.1 Da

IEP (calculated)

6.236

GRAVY (calculated)

-0.242

Length

561 amino acids

Sequence
(BLAST)

001: MRSRGSFALN HAVAFLVWWM VHCGSELVAA VPPDGWYDYT AHTDCRGRPE PAQYNGGILK YGNGDDPNGY KTTETGVLSP AFVVYNLNKS TMYTFSGWVK
101: LEGSPSALIT ARLAPDNSGT RCIGTVLARS DCWAFLKGGF VLDWPTQTSV IFFQNADRTP MKITTASASL QPFTTDQWSM HQKDTIRKRR KRMATVHVAD
201: PHGTRVVGAS VSVQQTAKDF PLGSAIASTI LGNDAYQKWF VDRFNAAVFE DELKWYSTEP ASGLLRFDVP DQMLAFVRSH RVMVRGHNIF WENQDATPRW
301: VKGLSPDDLR SAVNTRIQSL MTRYRGEFAH WDVNNEMLHF NFYEQRLGPN ATMEFFSVAQ DADPLATLFM NEYNVVETCD DVSSTVDAYV ARLKDLRAGG
401: AVLEGIGLEG HFSKPNIPYM RAVLDKLATL NLPIWFTEID INNKFDAQTQ AVYLEQVLRE AYAHPAVSGV MLWTALHENG CYQMCLTDWN LKNLPVGDVV
501: DRLLQEWQTG QVAGPTDVHG AYSFSGYLGE YVVTVNAGNT SKQATFSLSP GDETRHITVQ I

Best Arabidopsis Sequence Match ( AT4G38650.1 )
(BLAST)

001: MKCSSMCCLI LLALSLLTAF TLASSSNGID GPFYDSTAYT ECRAEAEKPL YNGGMLKDQK PSVPGKDSLT GIGAHYTPTY ILHNLTQNTI YCFSIWVKIE
101: AGAASAHVRA RLRADNATLN CVGSVTAKHG CWSFLKGGFL LDSPCKQSIL FFETSEDDGK IQLQVTSASL QPFTQEQWRN NQDYFINTAR KRAVTIHVSK
201: ENGESVEGAE VTVEQISKDF SIGSAISKTI LGNIPYQEWF VKRFDATVFE NELKWYATEP DQGKLNYTLA DKMMNFVRAN RIIARGHNIF WEDPKYNPDW
301: VRNLTGEDLR SAVNRRIKSL MTRYRGEFVH WDVSNEMLHF DFYETRLGKN ASYGFFAAAR EIDSLATLFF NDFNVVETCS DEKSTVDEYI ARVRELQRYD
401: GVRMDGIGLE GHFTTPNVAL MRAILDKLAT LQLPIWLTEI DISSSLDHRS QAIYLEQVLR EGFSHPSVNG IMLWTALHPN GCYQMCLTDD KFRNLPAGDV
501: VDQKLLEWKT GEVKATTDDH GSFSFFGFLG EYRVGIMYQG KTVNSSFSLS QGPETKHVRL QI

Arabidopsis Description

At4g38650 [Source:UniProtKB/TrEMBL;Acc:Q84VX1]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.