CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028398_P003	Maize	golgi, vacuole	97.14	95.94
Os03t0243700-01	Rice	cytosol	63.04	87.38
TraesCS4B01G227000.1	Wheat	vacuole	84.46	84.31
TraesCS4D01G227700.1	Wheat	plasma membrane, vacuole	83.93	83.78
TraesCS4A01G071100.2	Wheat	vacuole	82.68	82.53
HORVU4Hr1G063790.23	Barley	vacuole	75.54	74.47
EES10525	Sorghum	plasma membrane, vacuole	54.29	52.96
EER92683	Sorghum	vacuole	38.93	37.33
KXG39936	Sorghum	extracellular, vacuole	38.21	37.09
EER92684	Sorghum	endoplasmic reticulum, extracellular, vacuole	35.89	35.14
KXG34533	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	36.25	33.72
EES00361	Sorghum	cytosol	30.36	30.14
EES00362	Sorghum	cytosol	28.39	26.77
KXG30265	Sorghum	plastid	28.39	24.84
EER93683	Sorghum	cytosol	32.86	24.6
EER96324	Sorghum	mitochondrion	32.5	16.58

Protein Annotations

Gene3D:3.20.20.80	MapMan:35.1	EntrezGene:8078858	UniProt:C5WR04	InterPro:CarboxyPept-like_regulatory	EnsemblPlants:EER95184
ProteinID:EER95184	ProteinID:EER95184.1	InterPro:GH10	InterPro:GH10_AS	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glycoside_hydrolase_SF
InterPro:IPR001000	PFAM:PF00331	PRINTS:PR00134	ScanProsite:PS00591	PFscan:PS51760	PANTHER:PTHR31490
PANTHER:PTHR31490:SF21	MetaCyc:PWY-6784	SMART:SM00633	EnsemblPlantsGene:SORBI_3001G439400	SUPFAM:SSF49464	SUPFAM:SSF51445
unigene:Sbi.10286	SignalP:SignalP-noTM	UniParc:UPI0001A83299	RefSeq:XP_002468186.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr1:-:71743921..71747344

Molecular Weight (calculated)

62817.4 Da

IEP (calculated)

5.752

GRAVY (calculated)

-0.194

Length

560 amino acids

Sequence
(BLAST)

001: MKMHRFALPG LGFLVLWMLL HCGSELAAAV PPDGWYDYSA YTDCRGQPEP ALYNGGILKF GNSDDSDGYR TTETGVFSPA FVVYNLNKTT MYTFSCWVKL
101: EGAYSALITA RLAPDNTGAR CIATVLARSD CWAFVKGGFV LDWPTQTSVI FFQNADKTPM KITVASGSLQ PFTTDQWAMH QQDTIRKRRK RVATIHVADP
201: QGARVVGASV SVQQTAKDFP IGSAIASTIL GNQAYQQWFV DRFNAAVFED ELKWYSTEPM SGLLRFDVPD QMLAFVRSHR VMVRGHNIFW ENQDATPRWV
301: KNLTADDLRS AVNTRIQSLM TRYRGEFAHW DVNNEMLHYN FYEQRLGPNA SMDFFSVAQD ADPLATLFMN EYNVIETCDD PFSTVDTYVA KLKELRSGGA
401: ILEGIGLEGH FSKPNIPLMR AILDKLATLG LPIWFTEIDI SNKFDAQTQA AYLEQVLREA YSHPAVSGVM LWTALHPSGC YQMCLTDWNL ANLPTGDVVD
501: RLLNEWRTLQ AGGQTDAHGA YSFSGYLGEY VLTVSYNNRT TQSTFSLSPG DETRHINVQM

Best Arabidopsis Sequence Match ( AT4G38650.1 )
(BLAST)

001: MKCSSMCCLI LLALSLLTAF TLASSSNGID GPFYDSTAYT ECRAEAEKPL YNGGMLKDQK PSVPGKDSLT GIGAHYTPTY ILHNLTQNTI YCFSIWVKIE
101: AGAASAHVRA RLRADNATLN CVGSVTAKHG CWSFLKGGFL LDSPCKQSIL FFETSEDDGK IQLQVTSASL QPFTQEQWRN NQDYFINTAR KRAVTIHVSK
201: ENGESVEGAE VTVEQISKDF SIGSAISKTI LGNIPYQEWF VKRFDATVFE NELKWYATEP DQGKLNYTLA DKMMNFVRAN RIIARGHNIF WEDPKYNPDW
301: VRNLTGEDLR SAVNRRIKSL MTRYRGEFVH WDVSNEMLHF DFYETRLGKN ASYGFFAAAR EIDSLATLFF NDFNVVETCS DEKSTVDEYI ARVRELQRYD
401: GVRMDGIGLE GHFTTPNVAL MRAILDKLAT LQLPIWLTEI DISSSLDHRS QAIYLEQVLR EGFSHPSVNG IMLWTALHPN GCYQMCLTDD KFRNLPAGDV
501: VDQKLLEWKT GEVKATTDDH GSFSFFGFLG EYRVGIMYQG KTVNSSFSLS QGPETKHVRL QI

Arabidopsis Description

At4g38650 [Source:UniProtKB/TrEMBL;Acc:Q84VX1]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.