CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019586_P008	Maize	mitochondrion	95.36	95.27
Os07t0456700-01	Rice	plasma membrane	82.79	82.56
TraesCS2D01G124900.1	Wheat	mitochondrion	81.06	80.91
TraesCS2A01G122200.1	Wheat	mitochondrion	80.97	80.82
HORVU2Hr1G021350.12	Barley	mitochondrion	80.51	80.15
TraesCS2B01G144300.3	Wheat	mitochondrion	81.06	78.76
PGSC0003DMT400012713	Potato	cytosol, extracellular, nucleus	22.13	60.75
KRH61477	Soybean	cytosol	38.16	56.55
VIT_18s0001g08370.t01	Wine grape	mitochondrion	47.81	55.44
Solyc12g088210.1.1	Tomato	mitochondrion	46.36	55.27
KRH52165	Soybean	cytosol, nucleus	37.34	55.26
KRH15483	Soybean	mitochondrion	46.08	54.41
KRH05535	Soybean	mitochondrion	46.08	54.35
PGSC0003DMT400030115	Potato	mitochondrion	45.45	54.18
EER93683	Sorghum	cytosol	36.89	54.14
PGSC0003DMT400012716	Potato	mitochondrion	45.99	52.22
GSMUA_Achr1P24570_001	Banana	cytosol	56.28	52.15
Bra027867.1-P	Field mustard	cytosol	43.62	52.01
CDY53797	Canola	cytosol	43.62	52.01
AT1G58370.2	Thale cress	cytosol	44.72	51.96
CDY48844	Canola	cytosol	43.44	51.79
EES00361	Sorghum	cytosol	26.5	51.6
Bra031698.1-P	Field mustard	cytosol	49.54	51.47
AT4G08160.1	Thale cress	cytosol	35.15	51.33
AT1G10050.3	Thale cress	endoplasmic reticulum, plasma membrane, vacuole	48.45	48.58
EES00362	Sorghum	cytosol	25.32	46.8
CDY29140	Canola	cytosol	34.79	44.78
Solyc04g077190.2.1	Tomato	extracellular	46.17	44.32
KXG30265	Sorghum	plastid	25.59	43.91
Bra039768.1-P	Field mustard	cytosol	36.07	40.24
CDX75175	Canola	cytosol	34.61	39.83
CDY53833	Canola	endoplasmic reticulum, extracellular	49.73	37.55
CDY22606	Canola	endoplasmic reticulum, vacuole	49.45	37.29
EER95184	Sorghum	vacuole	16.58	32.5
KXG39936	Sorghum	extracellular, vacuole	15.76	29.98
EER92683	Sorghum	vacuole	15.94	29.97
EES10525	Sorghum	plasma membrane, vacuole	15.39	29.44
KXG34533	Sorghum	endoplasmic reticulum, plasma membrane, vacuole	14.3	26.08
EER92684	Sorghum	endoplasmic reticulum, extracellular, vacuole	13.3	25.52

Protein Annotations

Gene3D:2.60.120.260	MapMan:21.2.2.2.4	Gene3D:3.20.20.80	EntrezGene:8059759	UniProt:C5X574	InterPro:CenC_carb-bd
EnsemblPlants:EER96324	ProteinID:EER96324	ProteinID:EER96324.1	InterPro:GH10	InterPro:GH10_AS	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0016798	InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	InterPro:IPR008979	PFAM:PF00331
PFAM:PF02018	PRINTS:PR00134	ScanProsite:PS00591	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF15
MetaCyc:PWY-6784	SMART:SM00633	EnsemblPlantsGene:SORBI_3002G127400	SUPFAM:SSF49785	SUPFAM:SSF51445	UniParc:UPI0001A83583
RefSeq:XP_002459803.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:17578667..17585126

Molecular Weight (calculated)

123429.0 Da

IEP (calculated)

7.217

GRAVY (calculated)

-0.402

Length

1098 amino acids

Sequence
(BLAST)

0001: MRRRCGWLSS LFRPRRAGRS LPQPDPQGPD SEPKAVDKRS ASDEVTMENI VSNSDFSEGL HLWQPNSCHA FIAVEGSGYH YGVRPHSGST YAVLTHRTQS
0101: WQGLEQDITE KVTLGTEYFV AAYVRVHGEV HEPIGVQVTL KLEEGSSTNY LSIARILASQ ERWEKIEGSF NLTTLPRRLV FYLEGPPPGV DLLIDSVTIS
0201: YKKTEGSASS IGGTENIILN YDFSKGLHPW NPICCHAYVA SQWSGFLDGI RGNSGENYAV VSKRTEHWQG LEQDITNQVS IGTAYVVSAF VRVDGNVQGQ
0301: VEVKGTLRLQ NADGSTHYNP VGSVVASKEK WNKLEGSFSL TNMPKNVVFY LEGPPAGVDL VIDSVTITCS RHKQSKEVKV PSGAETIIKN PHFDDGLKNW
0401: SGRGCNICRH EFTAYGDVRP LNGSYFASAT GRVHNWNGIQ QEITGRVQRK VLYEISSAVR IFGSANDTEV RATLWVQEYG RERYVGLAKN QTSDKQWTHL
0501: KGKFLLHAPF TKAVIFIEGP PAGIDILVDG LVLSPARKLQ AAPCPKIQNV QYGTNLLHNN AFTRGLAGWS PMGSCRLSIQ TEAHHMLSSI LKDRASQKHI
0601: SGRYILATNR TDVWMGPSQV ITDKLRLHVT YRVSAWVRVG SGGHGRHHVN VCLAVDNNQW VNGGQVEADG DQWYEIKGAF KLEKQPSKVT AYVQGPPPGV
0701: DLRVMDFQIY PVDRKARFEY LKDKTDKVRK RDVVLKFQGS NAVNLLGSSV RIQQTENSFP FGSCIARHNI ENEDLAEFFV KNFNWAVFEN ELKWYHTEAE
0801: QGRLNYKDSD ELLEFCEKHK IQVRGHCLFW EVEDAVQPWV RSLQGHHLMA AIQNRLQSLL SRYRGRFRHH DVNNEMLHGS FYEDRLGRDI RAYMFREAHK
0901: LDPSAVLFVN DYNVEDGCDT KSTPEKFVEQ VVDLQERGAP VGGIGVQGHI SHPVGEIICD SLDKLAILGL PIWITELDVT AENEHIRADD LEVFLREAFA
1001: HPAVGGIILW GFWEMFMFRE HAHLVDADGT INEAGRRYLA LKQEWLTRTN GNVDRQGEFK FRGYHGSYTV EVDTPSGKVA RSFVVDKDSP VQVITLNV

Best Arabidopsis Sequence Match ( AT1G10050.3 )
(BLAST)

0001: MSVGFLFLQL ITFLCPLASL FSSFPFKVQA KLMADLNIVM NGDFFAGIEP WYPNGCEAFV VSSDPFSSEV MSADSSSGGY VVVTNRKETW QGLEQDITTR
0101: VASGMNYTVS TCVGVSGPFN ESAEVLSTVR LEHEDSPTEY LCIGKTYASR DKWVDLEGTF SISNMPDRVV LYLEGPAPGK DLLIRSVTVR SSTSSDFQET
0201: EKNTDASNVF PLALNIIKNH DFSDGLYSWN TNGCDSFVVS SNDCNLESNA VVNNRSETWQ GLEQDITDNV SPGFSYKVSA SVSVSGPVLG SAQVLATLKL
0301: EHKSSATEFQ LIGKTYASKD IWKTLEGTFE VSGRPDRVVF FLEGPPPGID LLVKSVTIHC ESDNQFERSR EFCSAPESDN HIFLNSSFSD GLNHWSGRGC
0401: NLMLHESLAD GKILPDSGTC FASASERTHK WSGIEQDITE RVQRKLIYEA SSVVRLSHSH HTVQATLYVQ YLDQREEYIG ISSVQGTHDD WVELKGKFLL
0501: NGSPARAVVY IEGPPPGIDV FVDHFAVKPA EKETPSGRPY IESHAFGMNI VSNSHLSDGT IEGWFPLGDC HLKVGDGSPR ILPPLARDSL RKTQGYLSGR
0601: YVLATNRSGT WMGPAQTITD KVKLFVTYQV SAWVKIGSGG RTSPQDVNIA LSVDGNWVNG GKVEVDDGDW HEVVGSFRIE KEAKEVMLHV QGPSPGVDLM
0701: VAGLQIFAVD RKARLSYLRG QADVVRKRNV CLKFSGLDPS ELSGATVKIR QTRNSFPLGS CISRSNIDNE DFVDFFLNNF DWAVFGYELK WYWTEPEQGN
0801: FNYRDANEMI EFCERYNIKT RGHCIFWEVE SAIQPWVQQL TGSKLEAAVE NRVTDLLTRY NGKFRHYDVN NEMLHGSFYR DRLDSDARAN MFKTAHELDP
0901: LATLFLNEYH IEDGFDSRSS PEKYIKLVHK LQKKGAPVGG IGIQGHITSP VGHIVRSALD KLSTLGLPIW FTELDVSSTN EHIRGDDLEV MLWEAFAHPA
1001: VEGVMLWGFW ELFMSREHSH LVNADGEVNE AGKRFLEIKR EWLSFVDGEI EDGGGLEFRG YHGSYTVEVV TSESKYVTNF VVDKGNSPVD VIIDL

Arabidopsis Description

glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G10050]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.