CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29140	Canola	cytosol	85.12	95.19
AT4G08160.1	Thale cress	cytosol	68.76	87.23
PGSC0003DMT400012713	Potato	cytosol, extracellular, nucleus	28.2	67.25
KRH52165	Soybean	cytosol, nucleus	51.36	66.04
KRH61477	Soybean	cytosol	51.15	65.86
CDY53797	Canola	cytosol	52.31	54.18
CDY48844	Canola	cytosol	52.31	54.18
KRH15483	Soybean	mitochondrion	50.73	52.04
KRH05535	Soybean	mitochondrion	50.73	51.99
VIT_18s0001g08370.t01	Wine grape	mitochondrion	51.36	51.74
Solyc12g088210.1.1	Tomato	mitochondrion	48.74	50.49
PGSC0003DMT400030115	Potato	mitochondrion	48.11	49.84
PGSC0003DMT400012716	Potato	mitochondrion	48.85	48.19
Solyc04g077190.2.1	Tomato	extracellular	50.63	42.22
CDX72432	Canola	cytosol	5.87	36.13
HORVU2Hr1G021350.12	Barley	mitochondrion	41.09	35.54
TraesCS2A01G122200.1	Wheat	mitochondrion	40.67	35.27
TraesCS2D01G124900.1	Wheat	mitochondrion	40.67	35.27
Os07t0456700-01	Rice	plasma membrane	40.15	34.79
Zm00001d019586_P008	Maize	mitochondrion	39.94	34.67
EER96324	Sorghum	mitochondrion	39.83	34.61
TraesCS2B01G144300.3	Wheat	mitochondrion	40.88	34.51
GSMUA_Achr1P24570_001	Banana	cytosol	40.15	32.32
CDY53833	Canola	endoplasmic reticulum, extracellular	46.86	30.74
CDY22606	Canola	endoplasmic reticulum, vacuole	46.65	30.56
CDX90288	Canola	endoplasmic reticulum, extracellular	17.4	29.43
CDY12095	Canola	vacuole	13.84	27.1
CDY49598	Canola	cytosol	5.24	26.45
CDY48434	Canola	vacuole	15.72	26.18
CDX71170	Canola	cytosol, plastid, vacuole	12.37	25.99
CDX72430	Canola	extracellular, vacuole	15.41	25.93
CDY28324	Canola	endoplasmic reticulum, extracellular, vacuole	15.51	25.83
CDY69164	Canola	vacuole	15.41	25.65
CDY49377	Canola	extracellular, vacuole	15.3	25.61
CDY28323	Canola	vacuole	14.88	25.49
CDY48433	Canola	vacuole	14.88	24.52
CDY28325	Canola	vacuole	14.88	24.52
CDY49378	Canola	plasma membrane, vacuole	14.68	24.48
CDY49599	Canola	extracellular, vacuole	8.18	22.03
CDX72434	Canola	cytosol, vacuole	14.78	16.08

Protein Annotations

Gene3D:2.60.120.260	MapMan:21.2.2.2.4	Gene3D:3.20.20.80	GO:A0A078CE79	EnsemblPlants:CDX75175	ProteinID:CDX75175
ProteinID:CDX75175.1	InterPro:CenC_carb-bd	InterPro:GH10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	EnsemblPlantsGene:GSBRNA2T00119094001
InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	InterPro:IPR008979	PFAM:PF00331	PFAM:PF02018
PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF15	MetaCyc:PWY-6784	SMART:SM00633	SUPFAM:SSF49785
SUPFAM:SSF51445	UniPathway:UPA00114	UniParc:UPI0004EDF1EE	SEG:seg	:	:

Description

BnaC09g25070D

Coordinates

chrLK031803:+:2171125..2176967

Molecular Weight (calculated)

107126.0 Da

IEP (calculated)

5.913

GRAVY (calculated)

-0.124

Length

954 amino acids

Sequence
(BLAST)

001: MEKNTKVTLS NDAEDDNVHH HTNKEQDSII LNPNFEDGLK NWNGRGCKAV LHESMDGGKI VPLSGHVFAA ATERKAAWNG IQQEISGRFQ RKRVYEVTSV
101: VRIFGNNATS ATVQATLWVL NANQREQYIA IANVQAGNND WVELKGKFLI HGSPSRVILY LEGPPPGTDI LVNTLDVKHA RRNRPSPPPF YEVCALTINN
201: ALKLAIARFV VWINPGFGIN IVENSEVGDG ETQPWFTLGN CKLSVGQGAP RTLPPMARET LGSHKPLGGS YILVTNRSQT WMGPAQMIAD KIKLFLTYQI
301: SAWVKLSVGA SSGISPQNVN IALSVDNQWV NGGQVEVSVG ETWHELGGSF RLEKQPQNVM VYVQGPAAGI NLMIAGLQIF PVDRRERIRC LKKQVDEVRK
401: RDIILKFSGL DESCDLFPYI VKVKQTHNSF PVGTCINRTD IDNEDFVDFF TKNFNWAVFG NELKWYWTEA ERGKLNYQDA DDMLDLCIGN NINVRGHCIF
501: WEVESTVQPW VRQLNKTELM NAVQKRLTDI LTRYKGKFKH YDVNNEMLHG SFYQDRLGKG VRALMFNIAH KLDPSALLFV NDYHVEDGDD TRSSPEKYSR
601: LILELEAQGA AIGGIGIQGH IDSPVGAIVC SALDNLSVLG HPIWFTELDV SSRNEFVRGE DLEVMLWEAF AHPAVEGIIL WGFWELSMSR ENSNLVEGEG
701: EVNEAGKRFL DVKQEWLSHA YGIINNESEF IFRGYHGTYA VEVCTPAGIV LKTFVVEKGE SPLFLSIDLS YLLILCLGCF WIRFKKINPV PTKSFSDLES
801: GCFLPMVLVQ IPMCNEKGLN DDGFYFHLSI FFVLIADTRG VEGFNHHRSP STLTILISAL FVDLVDEGFN IPASFFDLVD DTVGFKISAC FFDLIDDTRG
901: FQHLSFFLRS RHSTVSTSQV RFDSSLSFGF GFVSDHLVYK SLKSDSIFVL CFND

Best Arabidopsis Sequence Match ( AT4G08160.1 )
(BLAST)

001: MEKNTNTNHT SDDNNDKNHT NEEQEKIILN PNFEDGLNNW TGRACKIVLH ESMDSGKIVP LSGKVFAAAT QRKDTWNGIQ QEISGRFRRK RVYEVTAVVR
101: IFGNNVTSAT VQATLWVLNA NKREQYIVIA NVQATDKNWV ELKGKFVIHG SPSRVILYLE GPPPRADILL NSLVVQHAKR NRPSPPPFYE NPGFGVNIVE
201: NSEVLDGGTK PWFTLGNCKL SVGQGAPRTL PPMARDTLGP HKPLGGNYIV VTNRTQTWMG PAQMITDKIK LFLTYQISAW VKLGVGVSGS SMSPQNVNIA
301: LSVDNQWVNG GQVEVTVGDT WHEIAGSFRL EKQPQNVMVY VQGPGAGIDL MIAALQIFPV DRRERVRCLK RQVDEVRKRD IVLKFSGLND DESFDLFPYI
401: VKVKQTYNSF PVGTCINRTD IDNEDFVDFF TKNFNWAVFG NELKWYATEA ERGKVNYQDA DDMLDLCIGN NINVRGHCIF WEVESTVQPW VRQLNKTDLM
501: NAVQKRLTDL LTRYKGKFKH YDVNNEMLHG SFYQDRLGKG VRALMFNIAH KLDPSPLLFV NDYHVEDGDD PRSSPEKYIK LVLDLEAQGA TVGGIGIQGH
601: IDSPVGAIVC SALDMLSVLG RPIWFTELDV SSSNEYVRGE DLEVMLWEAF AHPSVEGIML WGFWELSMSR ENANLVEGEG EVNEAGKRFL EVKQEWLSHA
701: YGIINDESEF TFRGYHGTYA VEICTPAGIV LKTFVVEKGD TPLVISIDLS SL

Arabidopsis Description

Glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4JG10]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.