Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P09810_001 | Banana | cytosol | 36.54 | 61.86 |
| GSMUA_Achr6P30170_001 | Banana | cytosol | 34.43 | 58.87 |
| KRH61477 | Soybean | cytosol | 36.54 | 58.43 |
| KRH52165 | Soybean | cytosol, nucleus | 36.46 | 58.22 |
| VIT_18s0001g08370.t01 | Wine grape | mitochondrion | 46.16 | 57.76 |
| EER96324 | Sorghum | mitochondrion | 52.15 | 56.28 |
| PGSC0003DMT400012713 | Potato | cytosol, extracellular, nucleus | 18.99 | 56.25 |
| HORVU2Hr1G021350.12 | Barley | mitochondrion | 52.07 | 55.94 |
| Zm00001d019586_P008 | Maize | mitochondrion | 51.73 | 55.78 |
| TraesCS2D01G124900.1 | Wheat | mitochondrion | 51.73 | 55.73 |
| TraesCS2A01G122200.1 | Wheat | mitochondrion | 51.73 | 55.73 |
| Os07t0456700-01 | Rice | plasma membrane | 51.56 | 55.49 |
| KRH05535 | Soybean | mitochondrion | 43.54 | 55.42 |
| KRH15483 | Soybean | mitochondrion | 43.38 | 55.27 |
| Solyc12g088210.1.1 | Tomato | mitochondrion | 42.78 | 55.05 |
| TraesCS2B01G144300.3 | Wheat | mitochondrion | 52.32 | 54.87 |
| CDY53797 | Canola | cytosol | 42.11 | 54.18 |
| Bra027867.1-P | Field mustard | cytosol | 42.11 | 54.18 |
| CDY48844 | Canola | cytosol | 41.94 | 53.96 |
| PGSC0003DMT400030115 | Potato | mitochondrion | 41.86 | 53.85 |
| AT1G58370.2 | Thale cress | cytosol | 42.28 | 53.02 |
| AT4G08160.1 | Thale cress | cytosol | 32.83 | 51.73 |
| PGSC0003DMT400012716 | Potato | mitochondrion | 42.19 | 51.71 |
| Bra031698.1-P | Field mustard | cytosol | 44.64 | 50.05 |
| AT1G10050.3 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 44.73 | 48.4 |
| CDY29140 | Canola | cytosol | 32.15 | 44.67 |
| Solyc04g077190.2.1 | Tomato | extracellular | 42.11 | 43.62 |
| CDX75175 | Canola | cytosol | 32.32 | 40.15 |
| Bra039768.1-P | Field mustard | cytosol | 33.16 | 39.94 |
| CDY53833 | Canola | endoplasmic reticulum, extracellular | 44.47 | 36.24 |
| CDY22606 | Canola | endoplasmic reticulum, vacuole | 44.22 | 35.99 |
| GSMUA_Achr5P11430_001 | Banana | extracellular, vacuole | 12.91 | 26.84 |
| GSMUA_Achr1P12500_001 | Banana | extracellular, vacuole | 12.74 | 26.54 |
| GSMUA_Achr1P12520_001 | Banana | mitochondrion | 11.31 | 14.63 |
| GSMUA_Achr1P12510_001 | Banana | cytosol | 10.21 | 12.63 |
Protein Annotations
| Gene3D:2.60.120.260 | MapMan:21.2.2.2.4 | Gene3D:3.20.20.80 | InterPro:CenC_carb-bd | ncoils:Coil | InterPro:GH10 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016787 | GO:GO:0016798 | EnsemblPlantsGene:GSMUA_Achr1G24570_001 | EnsemblPlants:GSMUA_Achr1P24570_001 | EnsemblPlants:GSMUA_Achr1T24570_001 | InterPro:Galactose-bd-like_sf |
| InterPro:Glycoside_hydrolase_SF | InterPro:IPR001000 | InterPro:IPR008979 | UniProt:M0S2R4 | PFAM:PF00331 | PFAM:PF02018 |
| PRINTS:PR00134 | PFscan:PS51760 | PANTHER:PTHR31490 | PANTHER:PTHR31490:SF15 | SMART:SM00633 | SUPFAM:SSF49785 |
| SUPFAM:SSF51445 | UniParc:UPI000295F7CB | SEG:seg | : | : | : |
Description
glycosyl hydrolase family 10 protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G24570_001]
Coordinates
chr1:+:18990188..19005137
Molecular Weight (calculated)
131615.0 Da
IEP (calculated)
6.170
GRAVY (calculated)
-0.234
Length
1185 amino acids
Sequence
(BLAST)
(BLAST)
0001: MNIISNHDFS NGLESWHPNC CHAYVASAIS GFLNGVRPSS GGNYAVVTQR NESWQGLEQD ITEKVTVSVK YTVTACVGVY GDLHGPAGVQ ATLKLENSDS
0101: SISYMFIERI LVSKDCWEML EGSFSLASMP RRVVFYLEGP PPGVDLLIDT VVISSEQRME MMVNTQNHVI NIISNHDFSC GLEPWVPNCC HAYVASKESG
0201: FLNGVRPNSG ENYAVVTQRS ECWQGLEQDI TAKVTFGAKH DVSAYIGVYG VLHEPAEVKA TLKFENSDSS TGYLSIGSAF VSKGCWQKLE GSFSLTSMPR
0301: RVVFYLEGPN PGMDLLIDSV TISCDVCAFD LDTEVCRATS VDENIVRNPQ FEDGLSDWSG RGCKILLHNS LVNGKILPVK GRYFVSATER NQTWNGIEQE
0401: ITGRVSRKLA YEVTAVVRTF GNANNADVRA TLWAQSPNGR EQYIGIAKIQ ASDKEWVKLQ GKFLLNGVAS RAIIFIEGPP PGTDILVDSF VVRRAMKAAA
0501: SVPPSDEGFR DNIDSRKVVS TNIISNHDFS RGLQSWSLNL CDGFVVSGEF GPLKGVTAKT GSNYAVLTNR SESWHALEQD ITNKVSTGLT YSVSVIVRIS
0601: GAHQEPSAVK ATLKLEHLDS QLSYISVGRA MVSKERWEML EGSFSLTSMP KCVIFYLEGP SAGVDLLIDS VVVSCSDVEH CEDVSHGANI IRNSSFTDGL
0701: NWWNPLGSCK LSIGTVPEEF FPLAKDSVNH NQPISSHFIL TTNRTETWMG PSQIITDRIK LHVTYQVATW VRLGSGATSP HHVNVALGVD NQWINGGQVE
0801: ANSDRWNKIR GSFRIEKRPS KVIVYVQGPP PGVDLMLSEL QIFPVNRKAR YKVLKEKADK IRKRDVILKF SGSENEGLVG ASLKIKQIDN CFAFGGCINR
0901: SNIENEDFVD FFLKNFNWAV FGNELKWYHT ESQQGKFNYK DADELLDFCH KHGKQTRGHC IFWEVEDAIQ PWVRSLDSND LLIAVQNRIR GLLSRYRGKF
1001: RHYDVNNEML HGSFYQDRLG KDIWAYMFQE AHQLDPSAIL FVNDYNVEDG CDSKSTPEKY IQQILDLQER GAPIGGIGIQ GHISHPVGEI ICDALDKLAI
1101: LGLPIWDHSH LVDAEGNINE AGKRYLALRQ EWLSHADGNI DTQGEFRFSG YHGTYTVDIA TASKSISRSF IVDKGDSPLV LTIDK
0101: SISYMFIERI LVSKDCWEML EGSFSLASMP RRVVFYLEGP PPGVDLLIDT VVISSEQRME MMVNTQNHVI NIISNHDFSC GLEPWVPNCC HAYVASKESG
0201: FLNGVRPNSG ENYAVVTQRS ECWQGLEQDI TAKVTFGAKH DVSAYIGVYG VLHEPAEVKA TLKFENSDSS TGYLSIGSAF VSKGCWQKLE GSFSLTSMPR
0301: RVVFYLEGPN PGMDLLIDSV TISCDVCAFD LDTEVCRATS VDENIVRNPQ FEDGLSDWSG RGCKILLHNS LVNGKILPVK GRYFVSATER NQTWNGIEQE
0401: ITGRVSRKLA YEVTAVVRTF GNANNADVRA TLWAQSPNGR EQYIGIAKIQ ASDKEWVKLQ GKFLLNGVAS RAIIFIEGPP PGTDILVDSF VVRRAMKAAA
0501: SVPPSDEGFR DNIDSRKVVS TNIISNHDFS RGLQSWSLNL CDGFVVSGEF GPLKGVTAKT GSNYAVLTNR SESWHALEQD ITNKVSTGLT YSVSVIVRIS
0601: GAHQEPSAVK ATLKLEHLDS QLSYISVGRA MVSKERWEML EGSFSLTSMP KCVIFYLEGP SAGVDLLIDS VVVSCSDVEH CEDVSHGANI IRNSSFTDGL
0701: NWWNPLGSCK LSIGTVPEEF FPLAKDSVNH NQPISSHFIL TTNRTETWMG PSQIITDRIK LHVTYQVATW VRLGSGATSP HHVNVALGVD NQWINGGQVE
0801: ANSDRWNKIR GSFRIEKRPS KVIVYVQGPP PGVDLMLSEL QIFPVNRKAR YKVLKEKADK IRKRDVILKF SGSENEGLVG ASLKIKQIDN CFAFGGCINR
0901: SNIENEDFVD FFLKNFNWAV FGNELKWYHT ESQQGKFNYK DADELLDFCH KHGKQTRGHC IFWEVEDAIQ PWVRSLDSND LLIAVQNRIR GLLSRYRGKF
1001: RHYDVNNEML HGSFYQDRLG KDIWAYMFQE AHQLDPSAIL FVNDYNVEDG CDSKSTPEKY IQQILDLQER GAPIGGIGIQ GHISHPVGEI ICDALDKLAI
1101: LGLPIWDHSH LVDAEGNINE AGKRYLALRQ EWLSHADGNI DTQGEFRFSG YHGTYTVDIA TASKSISRSF IVDKGDSPLV LTIDK
0001: MSVGFLFLQL ITFLCPLASL FSSFPFKVQA KLMADLNIVM NGDFFAGIEP WYPNGCEAFV VSSDPFSSEV MSADSSSGGY VVVTNRKETW QGLEQDITTR
0101: VASGMNYTVS TCVGVSGPFN ESAEVLSTVR LEHEDSPTEY LCIGKTYASR DKWVDLEGTF SISNMPDRVV LYLEGPAPGK DLLIRSVTVR SSTSSDFQET
0201: EKNTDASNVF PLALNIIKNH DFSDGLYSWN TNGCDSFVVS SNDCNLESNA VVNNRSETWQ GLEQDITDNV SPGFSYKVSA SVSVSGPVLG SAQVLATLKL
0301: EHKSSATEFQ LIGKTYASKD IWKTLEGTFE VSGRPDRVVF FLEGPPPGID LLVKSVTIHC ESDNQFERSR EFCSAPESDN HIFLNSSFSD GLNHWSGRGC
0401: NLMLHESLAD GKILPDSGTC FASASERTHK WSGIEQDITE RVQRKLIYEA SSVVRLSHSH HTVQATLYVQ YLDQREEYIG ISSVQGTHDD WVELKGKFLL
0501: NGSPARAVVY IEGPPPGIDV FVDHFAVKPA EKETPSGRPY IESHAFGMNI VSNSHLSDGT IEGWFPLGDC HLKVGDGSPR ILPPLARDSL RKTQGYLSGR
0601: YVLATNRSGT WMGPAQTITD KVKLFVTYQV SAWVKIGSGG RTSPQDVNIA LSVDGNWVNG GKVEVDDGDW HEVVGSFRIE KEAKEVMLHV QGPSPGVDLM
0701: VAGLQIFAVD RKARLSYLRG QADVVRKRNV CLKFSGLDPS ELSGATVKIR QTRNSFPLGS CISRSNIDNE DFVDFFLNNF DWAVFGYELK WYWTEPEQGN
0801: FNYRDANEMI EFCERYNIKT RGHCIFWEVE SAIQPWVQQL TGSKLEAAVE NRVTDLLTRY NGKFRHYDVN NEMLHGSFYR DRLDSDARAN MFKTAHELDP
0901: LATLFLNEYH IEDGFDSRSS PEKYIKLVHK LQKKGAPVGG IGIQGHITSP VGHIVRSALD KLSTLGLPIW FTELDVSSTN EHIRGDDLEV MLWEAFAHPA
1001: VEGVMLWGFW ELFMSREHSH LVNADGEVNE AGKRFLEIKR EWLSFVDGEI EDGGGLEFRG YHGSYTVEVV TSESKYVTNF VVDKGNSPVD VIIDL
0101: VASGMNYTVS TCVGVSGPFN ESAEVLSTVR LEHEDSPTEY LCIGKTYASR DKWVDLEGTF SISNMPDRVV LYLEGPAPGK DLLIRSVTVR SSTSSDFQET
0201: EKNTDASNVF PLALNIIKNH DFSDGLYSWN TNGCDSFVVS SNDCNLESNA VVNNRSETWQ GLEQDITDNV SPGFSYKVSA SVSVSGPVLG SAQVLATLKL
0301: EHKSSATEFQ LIGKTYASKD IWKTLEGTFE VSGRPDRVVF FLEGPPPGID LLVKSVTIHC ESDNQFERSR EFCSAPESDN HIFLNSSFSD GLNHWSGRGC
0401: NLMLHESLAD GKILPDSGTC FASASERTHK WSGIEQDITE RVQRKLIYEA SSVVRLSHSH HTVQATLYVQ YLDQREEYIG ISSVQGTHDD WVELKGKFLL
0501: NGSPARAVVY IEGPPPGIDV FVDHFAVKPA EKETPSGRPY IESHAFGMNI VSNSHLSDGT IEGWFPLGDC HLKVGDGSPR ILPPLARDSL RKTQGYLSGR
0601: YVLATNRSGT WMGPAQTITD KVKLFVTYQV SAWVKIGSGG RTSPQDVNIA LSVDGNWVNG GKVEVDDGDW HEVVGSFRIE KEAKEVMLHV QGPSPGVDLM
0701: VAGLQIFAVD RKARLSYLRG QADVVRKRNV CLKFSGLDPS ELSGATVKIR QTRNSFPLGS CISRSNIDNE DFVDFFLNNF DWAVFGYELK WYWTEPEQGN
0801: FNYRDANEMI EFCERYNIKT RGHCIFWEVE SAIQPWVQQL TGSKLEAAVE NRVTDLLTRY NGKFRHYDVN NEMLHGSFYR DRLDSDARAN MFKTAHELDP
0901: LATLFLNEYH IEDGFDSRSS PEKYIKLVHK LQKKGAPVGG IGIQGHITSP VGHIVRSALD KLSTLGLPIW FTELDVSSTN EHIRGDDLEV MLWEAFAHPA
1001: VEGVMLWGFW ELFMSREHSH LVNADGEVNE AGKRFLEIKR EWLSFVDGEI EDGGGLEFRG YHGSYTVEVV TSESKYVTNF VVDKGNSPVD VIIDL
Arabidopsis Description
glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G10050]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.