Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48844 | Canola | cytosol | 97.61 | 97.61 |
| AT1G58370.2 | Thale cress | cytosol | 89.9 | 87.62 |
| KRH52165 | Soybean | cytosol, nucleus | 57.87 | 71.83 |
| KRH61477 | Soybean | cytosol | 57.22 | 71.12 |
| PGSC0003DMT400012713 | Potato | cytosol, extracellular, nucleus | 30.08 | 69.25 |
| VIT_18s0001g08370.t01 | Wine grape | mitochondrion | 68.84 | 66.95 |
| KRH05535 | Soybean | mitochondrion | 66.45 | 65.74 |
| KRH15483 | Soybean | mitochondrion | 66.12 | 65.48 |
| Solyc12g088210.1.1 | Tomato | mitochondrion | 63.63 | 63.63 |
| PGSC0003DMT400030115 | Potato | mitochondrion | 63.3 | 63.3 |
| PGSC0003DMT400012716 | Potato | mitochondrion | 66.45 | 63.29 |
| CDY29140 | Canola | cytosol | 54.18 | 58.5 |
| Solyc04g077190.2.1 | Tomato | extracellular | 65.8 | 52.97 |
| CDX75175 | Canola | cytosol | 54.18 | 52.31 |
| HORVU2Hr1G021350.12 | Barley | mitochondrion | 53.09 | 44.33 |
| TraesCS2A01G122200.1 | Wheat | mitochondrion | 52.55 | 44.0 |
| TraesCS2D01G124900.1 | Wheat | mitochondrion | 52.55 | 44.0 |
| Os07t0456700-01 | Rice | plasma membrane | 52.33 | 43.78 |
| EER96324 | Sorghum | mitochondrion | 52.01 | 43.62 |
| Zm00001d019586_P008 | Maize | mitochondrion | 51.68 | 43.31 |
| TraesCS2B01G144300.3 | Wheat | mitochondrion | 52.77 | 43.01 |
| GSMUA_Achr1P24570_001 | Banana | cytosol | 54.18 | 42.11 |
| CDY22606 | Canola | endoplasmic reticulum, vacuole | 59.28 | 37.5 |
| CDY53833 | Canola | endoplasmic reticulum, extracellular | 58.96 | 37.35 |
| CDX72432 | Canola | cytosol | 5.54 | 32.9 |
| CDX90288 | Canola | endoplasmic reticulum, extracellular | 18.13 | 29.61 |
| CDY28324 | Canola | endoplasmic reticulum, extracellular, vacuole | 17.05 | 27.4 |
| CDY48434 | Canola | vacuole | 16.94 | 27.23 |
| CDY28323 | Canola | vacuole | 16.4 | 27.11 |
| CDY12095 | Canola | vacuole | 14.33 | 27.1 |
| CDY49598 | Canola | cytosol | 5.54 | 26.98 |
| CDY69164 | Canola | vacuole | 16.72 | 26.88 |
| CDX71170 | Canola | cytosol, plastid, vacuole | 12.92 | 26.21 |
| CDY48433 | Canola | vacuole | 16.18 | 25.73 |
| CDY28325 | Canola | vacuole | 15.96 | 25.39 |
| CDY49378 | Canola | plasma membrane, vacuole | 15.74 | 25.35 |
| CDX72430 | Canola | extracellular, vacuole | 15.53 | 25.22 |
| CDY49377 | Canola | extracellular, vacuole | 15.31 | 24.74 |
| CDY49599 | Canola | extracellular, vacuole | 9.01 | 23.45 |
| CDX72434 | Canola | cytosol, vacuole | 16.18 | 16.99 |
Protein Annotations
| Gene3D:2.60.120.260 | MapMan:21.2.2.2.4 | Gene3D:3.20.20.80 | GO:A0A078IUW0 | UniProt:A0A078IUW0 | EnsemblPlants:CDY53797 |
| ProteinID:CDY53797 | ProteinID:CDY53797.1 | InterPro:CenC_carb-bd | ncoils:Coil | InterPro:GH10 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 |
| GO:GO:0016798 | EnsemblPlantsGene:GSBRNA2T00011469001 | InterPro:Galactose-bd-like_sf | InterPro:Glycoside_hydrolase_SF | InterPro:IPR001000 | InterPro:IPR008979 |
| PFAM:PF00331 | PFAM:PF02018 | PRINTS:PR00134 | PFscan:PS51760 | PANTHER:PTHR31490 | PANTHER:PTHR31490:SF15 |
| MetaCyc:PWY-6784 | SMART:SM00633 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | UniPathway:UPA00114 | UniParc:UPI0004EE2D43 |
| SEG:seg | : | : | : | : | : |
Description
BnaCnng25660DBnaCnng25660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IUW0]
Coordinates
chrLK033238:+:65076..68651
Molecular Weight (calculated)
102576.0 Da
IEP (calculated)
6.311
GRAVY (calculated)
-0.335
Length
921 amino acids
Sequence
(BLAST)
(BLAST)
001: MEISRNDNGE HAKQNNNNNV TPVIGSDRTN VIVNHDFSLG THSWHPNCCE ASVVTADSGI PHGVLDPSKY GSYVVVKNRK ETWQGLEQDI TSRVKPCSLY
101: KVSATVAVSG PVQGLEEIIA TLKLENQQSP TNYQFIAKTC VFKEKWVRLE GMFSLPSVPE RVVFYLEGPS PGIDLLIQSV TIHLDSEPER ERLEGVTVED
201: ENLVVNPNFE DGLNNWSGRS CKIVCHDSMA DGKIIPQSGK AFAAATERTQ NWNGIQQEIT GKVERKRVYE ATAVVRIYGN NVTSATVQAT LWVQNPNQRD
301: QYIGIANVQA TDKEWIQCKG KFLLNGSASR VVIYIEGPPP GTDILLNSLT VKHAEKIPPS PRPPIENPAF GVNILTNSQL TDGTTNGWFP LGNCTLSVAE
401: GSPRILPPMA RYSLGPHEPL SGRYMLVTNR TQTWMGPAQM ITDKLKLFLT YQISVWVKLG SGINSPQNVN VALGIDSQWV NGGQVEINDD KWHEIGGSFR
501: VEKQPSKALV YIQGPSSGVD LMVAGLQIFP VDRLARIKHL RRQSDKIRRS DVILKFSGAD ASKLSGATVK VRQTRNSFPV GTCISRSSID NEDFVDFFLK
601: NFNWAVFGNE LKWYWTEPEQ GKLNYQDADD MLNLCSSNNI ETRGHCIFWE VQATVQQWIQ KMNQTDLNTA VQNRLTSLLN RYKGKFKHYD VNNEMLHGSF
701: YQDKLGKDIR VNMFKTAHQL DPSATLFVND YHIEDGCDPK SCPEKYIEHI LDLQEKGAPV GGIGIQGHID SPVGPIVCSA LDRLGILGLP IWFTELDVSS
801: INEHIRGDDL EVVMWEAFGH PAVEGIMLWG FWELFMSRDN SHLVNAEGDV NEAGKRLLAV KKDWLSHANG HIDQNGAFAF RGYHGNYAVE VITSSSQKVL
901: KTFVVEKGDS AQVITVDLQG L
101: KVSATVAVSG PVQGLEEIIA TLKLENQQSP TNYQFIAKTC VFKEKWVRLE GMFSLPSVPE RVVFYLEGPS PGIDLLIQSV TIHLDSEPER ERLEGVTVED
201: ENLVVNPNFE DGLNNWSGRS CKIVCHDSMA DGKIIPQSGK AFAAATERTQ NWNGIQQEIT GKVERKRVYE ATAVVRIYGN NVTSATVQAT LWVQNPNQRD
301: QYIGIANVQA TDKEWIQCKG KFLLNGSASR VVIYIEGPPP GTDILLNSLT VKHAEKIPPS PRPPIENPAF GVNILTNSQL TDGTTNGWFP LGNCTLSVAE
401: GSPRILPPMA RYSLGPHEPL SGRYMLVTNR TQTWMGPAQM ITDKLKLFLT YQISVWVKLG SGINSPQNVN VALGIDSQWV NGGQVEINDD KWHEIGGSFR
501: VEKQPSKALV YIQGPSSGVD LMVAGLQIFP VDRLARIKHL RRQSDKIRRS DVILKFSGAD ASKLSGATVK VRQTRNSFPV GTCISRSSID NEDFVDFFLK
601: NFNWAVFGNE LKWYWTEPEQ GKLNYQDADD MLNLCSSNNI ETRGHCIFWE VQATVQQWIQ KMNQTDLNTA VQNRLTSLLN RYKGKFKHYD VNNEMLHGSF
701: YQDKLGKDIR VNMFKTAHQL DPSATLFVND YHIEDGCDPK SCPEKYIEHI LDLQEKGAPV GGIGIQGHID SPVGPIVCSA LDRLGILGLP IWFTELDVSS
801: INEHIRGDDL EVVMWEAFGH PAVEGIMLWG FWELFMSRDN SHLVNAEGDV NEAGKRLLAV KKDWLSHANG HIDQNGAFAF RGYHGNYAVE VITSSSQKVL
901: KTFVVEKGDS AQVITVDLQG L
001: MEVSRKDNEE PEKQNNNNVA SIIGSDRTNV IVNHDFSSGM HSWHPNCCEA FVVTAESNVS HGVLDPSKCG SYVVVKNRKE TWQGLEQDIT NRVKPCSLYK
101: VSATVAVSGP VHGLVEVMAT LKLESQQSQT NYQFIAKTCV FKEKWVRLEG MFSLPSLPEK VVFYLEGPSP GIDLLIQSVT IHRESEPELE RVTAEDETIV
201: VNPNFEDGLN NWSGRSCKIV LHDSMADGKI VPESGKVFAS ATERTQNWNG IQQEITGKVQ RKRVYEATAV VRIYGNNVTT ATVQATLWVQ NPNQRDQYIG
301: ISTVQATDKE WIHLKGKFLL NGSASRVVIY IEGPPPGTDI LLNSLTVKHA EKIPPSPPPS IENPAFGVNI LTNSHLSDDT TNGWFSLGNC TLSVAEGSPR
401: ILPPMARDSL GAHERLSGRY ILVTNRTQTW MGPAQMITDK LKLFLTYQIS VWVKVGSGIN SPQNVNVALG IDSQWVNGGQ VEINDDRWHE IGGSFRIEKN
501: PSKALVYVQG PSSGIDLMVA GLQIFPVDRL ARIKHLKRQC DKIRKRDVIL KFAGVDSSKF SGASVRVRQI RNSFPVGTCI SRSNIDNEDF VDFFLKNFNW
601: AVFANELKWY WTEPEQGKLN YQDADDMLNL CSSNNIETRG HCIFWEVQAT VQQWIQNMNQ TDLNNAVQNR LTDLLNRYKG KFKHYDVNNE MLHGSFYQDK
701: LGKDIRVNMF KTAHQLDPSA TLFVNDYHIE DGCDPKSCPE KYTEQILDLQ EKGAPVGGIG IQGHIDSPVG PIVCSALDKL GILGLPIWFT ELDVSSVNEH
801: IRADDLEVMM WEAFGHPAVE GIMLWGFWEL FMSRDNSHLV NAEGDVNEAG KRFLAVKKDW LSHANGHIDQ NGAFPFRGYS GNYAVEVITT SSSKVLKTFG
901: VDKEDSSQVI TVDLQGL
101: VSATVAVSGP VHGLVEVMAT LKLESQQSQT NYQFIAKTCV FKEKWVRLEG MFSLPSLPEK VVFYLEGPSP GIDLLIQSVT IHRESEPELE RVTAEDETIV
201: VNPNFEDGLN NWSGRSCKIV LHDSMADGKI VPESGKVFAS ATERTQNWNG IQQEITGKVQ RKRVYEATAV VRIYGNNVTT ATVQATLWVQ NPNQRDQYIG
301: ISTVQATDKE WIHLKGKFLL NGSASRVVIY IEGPPPGTDI LLNSLTVKHA EKIPPSPPPS IENPAFGVNI LTNSHLSDDT TNGWFSLGNC TLSVAEGSPR
401: ILPPMARDSL GAHERLSGRY ILVTNRTQTW MGPAQMITDK LKLFLTYQIS VWVKVGSGIN SPQNVNVALG IDSQWVNGGQ VEINDDRWHE IGGSFRIEKN
501: PSKALVYVQG PSSGIDLMVA GLQIFPVDRL ARIKHLKRQC DKIRKRDVIL KFAGVDSSKF SGASVRVRQI RNSFPVGTCI SRSNIDNEDF VDFFLKNFNW
601: AVFANELKWY WTEPEQGKLN YQDADDMLNL CSSNNIETRG HCIFWEVQAT VQQWIQNMNQ TDLNNAVQNR LTDLLNRYKG KFKHYDVNNE MLHGSFYQDK
701: LGKDIRVNMF KTAHQLDPSA TLFVNDYHIE DGCDPKSCPE KYTEQILDLQ EKGAPVGGIG IQGHIDSPVG PIVCSALDKL GILGLPIWFT ELDVSSVNEH
801: IRADDLEVMM WEAFGHPAVE GIMLWGFWEL FMSRDNSHLV NAEGDVNEAG KRFLAVKKDW LSHANGHIDQ NGAFPFRGYS GNYAVEVITT SSSKVLKTFG
901: VDKEDSSQVI TVDLQGL
Arabidopsis Description
RXF12glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein [Source:TAIR;Acc:AT1G58370]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.