CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 1
extracellular 4
golgi 4
plasma membrane 4
endoplasmic reticulum 5
vacuole 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90288	Canola	endoplasmic reticulum, extracellular	95.28	82.27
AT4G38650.1	Thale cress	vacuole	83.98	72.78
AT4G38300.1	Thale cress	mitochondrion	33.26	58.48
KRH51408	Soybean	extracellular	59.96	52.99
KRH60710	Soybean	extracellular	58.93	51.53
GSMUA_Achr5P11430_001	Banana	extracellular, vacuole	56.67	48.42
PGSC0003DMT400015813	Potato	cytosol	49.08	47.23
PGSC0003DMT400021703	Potato	mitochondrion	36.76	47.23
VIT_03s0038g02180.t01	Wine grape	cytosol	58.93	45.92
Solyc01g111340.2.1	Tomato	extracellular	51.33	45.7
PGSC0003DMT400031416	Potato	cytosol, mitochondrion	31.42	45.4
Solyc11g040330.1.1	Tomato	extracellular	50.92	45.17
Os05t0304900-01	Rice	extracellular, vacuole	45.79	45.14
TraesCS2A01G061600.1	Wheat	extracellular, plasma membrane, vacuole	51.33	44.96
PGSC0003DMT400059688	Potato	cytosol, mitochondrion	39.84	44.7
PGSC0003DMT400085040	Potato	cytosol	18.89	44.44
Solyc10g055340.1.1	Tomato	cytosol	19.92	44.09
EES10525	Sorghum	plasma membrane, vacuole	51.95	44.08
Zm00001d025082_P002	Maize	endoplasmic reticulum, extracellular, plastid	51.75	43.83
TraesCS2B01G075000.1	Wheat	plastid	51.33	43.4
Solyc10g055370.1.1	Tomato	vacuole	49.49	42.96
HORVU2Hr1G011550.11	Barley	plasma membrane, plastid, vacuole	51.75	41.72
CDX72432	Canola	cytosol	11.7	36.77
CDY69164	Canola	vacuole	36.34	30.89
CDY28324	Canola	endoplasmic reticulum, extracellular, vacuole	36.34	30.89
CDY28323	Canola	vacuole	35.11	30.7
CDY49598	Canola	cytosol	11.91	30.69
CDY48433	Canola	vacuole	36.34	30.57
CDY28325	Canola	vacuole	35.93	30.22
CDY48434	Canola	vacuole	35.11	29.84
CDY49378	Canola	plasma membrane, vacuole	32.65	27.8
CDX71170	Canola	cytosol, plastid, vacuole	25.67	27.53
CDY49377	Canola	extracellular, vacuole	29.57	25.26
CDX72430	Canola	extracellular, vacuole	29.16	25.04
CDY49599	Canola	extracellular, vacuole	16.02	22.03
CDX72434	Canola	cytosol, vacuole	34.29	19.04
TraesCS1D01G329900.1	Wheat	peroxisome	3.29	17.98
CDY29140	Canola	cytosol	27.1	15.47
CDY48844	Canola	cytosol	27.31	14.44
CDY53797	Canola	cytosol	27.1	14.33
CDX75175	Canola	cytosol	27.1	13.84
CDY53833	Canola	endoplasmic reticulum, extracellular	28.34	9.49
CDY22606	Canola	endoplasmic reticulum, vacuole	28.13	9.41

Protein Annotations

Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:35.1	GO:A0A078FCK4	UniProt:A0A078FCK4	EnsemblPlants:CDY12095
ProteinID:CDY12095	ProteinID:CDY12095.1	InterPro:GH10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00061066001	InterPro:Galactose-bd-like_sf
InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	InterPro:IPR008979	PFAM:PF00331	PFscan:PS51760	PANTHER:PTHR31490
PANTHER:PTHR31490:SF3	MetaCyc:PWY-6784	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix
UniPathway:UPA00114	UniParc:UPI0004EEF9A0	SEG:seg	:	:	:

Description

BnaC03g60110DBnaC03g60110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FCK4]

Coordinates

chrLK032017:+:453051..455740

Molecular Weight (calculated)

54352.1 Da

IEP (calculated)

5.337

GRAVY (calculated)

-0.226

Length

487 amino acids

Sequence
(BLAST)

001: MKHSSIIAFI FSAIYSLLTA FVLASSSNDG PFYDSTAYTE CRAEPEKPLY NGGMLNEKEA SVSGGDTLRS VGASYTPAYI LHNLTQNTIY CFSIWVKIKA
101: GSASTARVRA KLRSDNATLN CVGSVSAKQG CWSFLKGGFL LDSPSQLSIL FFETSNDDGR TQLEVASASL QPFTQEQWKN NQDYFINTAR KRAVTIHVAG
201: ESGESVEGAV VNVEQIAKDF PIGSAISKTI LGNIPYQNEL KCLMTRYRGE FVHWDVSNEM LHFDFYESRL GKNASYELFA AARELDSLAT LFLNDFNVVE
301: TCSDERSTVD EYITRVRELE RYDGGGMRMD GVGLEGHFTR PNVALMRANL DKLATLELPV WLTEIDISST LDHRTQAIYL EQVLREGFSH PSVNGIILWT
401: ALHPNGCYQM CLTDDKFHNL PAGDVVDQKL LEWTTGEVKA KTDDHGTFSF LGFLGEYRVS IMYEGKTVNS SFSLSRDPET KHVRLRI

Best Arabidopsis Sequence Match ( AT4G38650.1 )
(BLAST)

001: MKCSSMCCLI LLALSLLTAF TLASSSNGID GPFYDSTAYT ECRAEAEKPL YNGGMLKDQK PSVPGKDSLT GIGAHYTPTY ILHNLTQNTI YCFSIWVKIE
101: AGAASAHVRA RLRADNATLN CVGSVTAKHG CWSFLKGGFL LDSPCKQSIL FFETSEDDGK IQLQVTSASL QPFTQEQWRN NQDYFINTAR KRAVTIHVSK
201: ENGESVEGAE VTVEQISKDF SIGSAISKTI LGNIPYQEWF VKRFDATVFE NELKWYATEP DQGKLNYTLA DKMMNFVRAN RIIARGHNIF WEDPKYNPDW
301: VRNLTGEDLR SAVNRRIKSL MTRYRGEFVH WDVSNEMLHF DFYETRLGKN ASYGFFAAAR EIDSLATLFF NDFNVVETCS DEKSTVDEYI ARVRELQRYD
401: GVRMDGIGLE GHFTTPNVAL MRAILDKLAT LQLPIWLTEI DISSSLDHRS QAIYLEQVLR EGFSHPSVNG IMLWTALHPN GCYQMCLTDD KFRNLPAGDV
501: VDQKLLEWKT GEVKATTDDH GSFSFFGFLG EYRVGIMYQG KTVNSSFSLS QGPETKHVRL QI

Arabidopsis Description

At4g38650 [Source:UniProtKB/TrEMBL;Acc:Q84VX1]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.