CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX72432	Canola	cytosol	40.21	49.03
CDX71170	Canola	cytosol, plastid, vacuole	98.41	40.97
KRG91115	Soybean	cytoskeleton, cytosol, plastid	38.62	40.78
Bra036392.1-P	Field mustard	cytosol	100.0	36.07
AT2G14690.1	Thale cress	vacuole	79.37	26.32
CDX72430	Canola	extracellular, vacuole	64.02	21.34
CDY49377	Canola	extracellular, vacuole	64.02	21.23
KRG91113	Soybean	endoplasmic reticulum, plasma membrane, vacuole	43.92	14.31
KRH35663	Soybean	plasma membrane, vacuole	43.39	14.11
CDY49378	Canola	plasma membrane, vacuole	38.1	12.59
CDY28323	Canola	vacuole	35.98	12.21
CDY28325	Canola	vacuole	36.51	11.92
CDY48433	Canola	vacuole	36.51	11.92
CDY12095	Canola	vacuole	30.69	11.91
CDY48434	Canola	vacuole	35.98	11.87
CDY69164	Canola	vacuole	35.98	11.87
CDY28324	Canola	endoplasmic reticulum, extracellular, vacuole	35.45	11.69
CDX90288	Canola	endoplasmic reticulum, extracellular	30.69	10.28
CDX72434	Canola	cytosol, vacuole	37.04	7.98
KRH35662	Soybean	cytosol, nucleus, vacuole	14.29	6.52
CDY29140	Canola	cytosol	25.4	5.63
CDY53797	Canola	cytosol	26.98	5.54
CDY48844	Canola	cytosol	25.93	5.32
CDX75175	Canola	cytosol	26.45	5.24
CDY53833	Canola	endoplasmic reticulum, extracellular	22.75	2.96
CDY22606	Canola	endoplasmic reticulum, vacuole	22.75	2.95
CDY49599	Canola	extracellular, vacuole	4.23	2.26
KRG91114	Soybean	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:CDY49598	EnsemblPlantsGene:GSBRNA2T00093437001	Gene3D:3.20.20.80	GO:A0A078IKK8	InterPro:Glycoside_hydrolase_SF	PANTHER:PTHR31490
PANTHER:PTHR31490:SF18	ProteinID:CDY49598	ProteinID:CDY49598.1	SUPFAM:SSF51445	UniParc:UPI0004EE024F	UniProt:A0A078IKK8
MapMan:35.1	:	:	:	:	:

Description

BnaAnng10270DBnaAnng10270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IKK8]

Coordinates

chrLK032846:-:58627..59288

Molecular Weight (calculated)

21113.9 Da

IEP (calculated)

4.112

GRAVY (calculated)

-0.298

Length

189 amino acids

Sequence
(BLAST)

001: MEEIVSYPGN MNIKGGIGAQ AHFVPAQPNL PYMRSALDTL GSLGFPVWLT EVDMPKCPDQ VKYMEEVLRE AYSHPAVQGI ILYAGPEMSG FNKLTLADND
101: FNNTEAGDLI DKLLQEWQQE PAEIPVEYHE HNDEEQSRII GFSPEVSLLH GHYTVTVTNP SMKNFSTTFS LEVTTETGQL QVVQLELDV

Best Arabidopsis Sequence Match ( AT2G14690.1 )
(BLAST)

001: MKRFNYGFFH LVLFLISLLL LGSGICMDPF SYDQSLKSEC LMEPPQTTAN TGGEGVKELK INENGGIRNV VEGVDLREGN IYITSAWVKL RNESQRKVGM
101: TFSEKNGRNV FGGEVMAKRG CWSLLKGGIT ADFSGPIDIF FESDGLAGLE ISVQNVRMQR FHKTQWRLQQ DQVIEKIRKN KVRFQMSFKN KSALEGSVIS
201: IEQIKPSFLL GCAMNYRILE SDSYREWFVS RFRLTSFTNE MKWYATEAVR GQENYKIADS MMQLAEENAI LVKGHTVLWD DKYWQPNWVK TITDPEDLKN
301: VTLNRMNSVM KRYKGRLIGW DVMNENVHFN YFENMLGGNA SAIVYSLASK LDPDIPLFLN EFNTVEYDKD RVVSPVNVVK KMQEIVSFPG NNNIKGGIGA
401: QGHFAPVQPN LAYMRYALDT LGSLSFPVWL TEVDMFKCPD QVKYMEDILR EAYSHPAVKA IILYGGPEVS GFDKLTLADK DFKNTQAGDL IDKLLQEWKQ
501: EPVEIPIQHH EHNDEEGGRI IGFSPEISLL HGHYRVTVTN PSMKNLSTRF SVEVTKESGH LQEVQLVIDA

Arabidopsis Description

1,4-beta-xylan endohydrolase [Source:UniProtKB/TrEMBL;Acc:Q680B7]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.