CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49598	Canola	cytosol	49.03	40.21
KRG91115	Soybean	cytoskeleton, cytosol, plastid	36.13	31.28
CDX72430	Canola	extracellular, vacuole	87.1	23.81
CDY49377	Canola	extracellular, vacuole	87.1	23.68
CDX71170	Canola	cytosol, plastid, vacuole	64.52	22.03
AT4G33810.3	Thale cress	extracellular, vacuole	79.35	21.62
AT4G33820.1	Thale cress	extracellular, vacuole	74.19	20.18
KRG91113	Soybean	endoplasmic reticulum, plasma membrane, vacuole	50.97	13.62
KRH35663	Soybean	plasma membrane, vacuole	50.97	13.6
CDY69164	Canola	vacuole	43.87	11.87
CDY12095	Canola	vacuole	36.77	11.7
CDY28324	Canola	endoplasmic reticulum, extracellular, vacuole	43.23	11.69
KRH35662	Soybean	cytosol, nucleus, vacuole	30.32	11.35
CDY28323	Canola	vacuole	40.0	11.13
CDY49378	Canola	plasma membrane, vacuole	40.0	10.84
CDY48434	Canola	vacuole	39.35	10.65
CDY48433	Canola	vacuole	39.35	10.54
CDY28325	Canola	vacuole	38.71	10.36
CDX90288	Canola	endoplasmic reticulum, extracellular	36.77	10.11
CDX72434	Canola	cytosol, vacuole	41.29	7.3
CDY29140	Canola	cytosol	35.48	6.45
CDX75175	Canola	cytosol	36.13	5.87
CDY48844	Canola	cytosol	32.9	5.54
CDY53797	Canola	cytosol	32.9	5.54
CDY53833	Canola	endoplasmic reticulum, extracellular	31.61	3.37
CDY22606	Canola	endoplasmic reticulum, vacuole	31.61	3.37
CDY49599	Canola	extracellular, vacuole	1.29	0.56
KRG91114	Soybean	nucleus	0.0	0.0

Protein Annotations

Gene3D:3.20.20.80	MapMan:35.1	GO:A0A078C690	EnsemblPlants:CDX72432	ProteinID:CDX72432	ProteinID:CDX72432.1
InterPro:GH10	InterPro:GH10_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00099935001	InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000
PFAM:PF00331	ScanProsite:PS00591	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF18	MetaCyc:PWY-6784
SUPFAM:SSF51445	UniPathway:UPA00114	UniParc:UPI0004EC197C	:	:	:

Description

BnaC07g44540D

Coordinates

chrLK031796:-:1199980..1200539

Molecular Weight (calculated)

17004.2 Da

IEP (calculated)

4.742

GRAVY (calculated)

-0.311

Length

155 amino acids

Sequence
(BLAST)

001: MLGVNASSRF YNLAYKLDPD VTLFVNEYNT IENPGGVTAT PVKEKMEEIL AYQGNENIKG AIGAQGHFSP TQPNIAYMRS ALDTLGSLGL PVWITELDMP
101: KCPNQAKYME EILREAYSHP AVEGIIIFAG PEVIGFGQAD TRGQGLQQHG DRRCN

Best Arabidopsis Sequence Match ( AT4G33810.1 )
(BLAST)

001: MKPPRSSETK GLLQFSRSVE DDSDEEWKID GSGSIREMTQ RIQLHEGNIY SFSAWVKLRE GNNKKVGVVF RTENGRFVHG GEVRAKKRCW TLLKGGIVPD
101: VSGSVDIFFE SDDKEAKISA SDVSLKQFSK QEWKLKQDQL IEKIRKSKVR FEVTYQNKTA VKGAVISIEQ TKPSFLLGCA MNFRILQSEG YRNWFASRFK
201: ITSFTNEMKW YTTEKERGHE NYTAADSMLK FAEENGILVR GHTVLWDDPL MQPTWVPKIE DPNDLMNVTL NRINSVMTRY KGKLTGWDVV NENVHWDYFE
301: KMLGANASSS FYNLAFKLDP DVTMFVNEYN TIENRVEVTA TPVKVKEKME EILAYPGNMN IKGAIGAQGH FRPTQPNLAY MRSALDTLGS LGLPIWLTEV
401: DMPKCPNQEV YIEEILREAY SHPAVKGIII FAGPEVSGFD KLTLADKYFN NTATGDVIDK LLKEWQQSSE IPKIFMTDSE NDEEEVSLLH GHYNVNVSHP
501: WMKNMSTSFS LEVTKEMGQR QVVRVVINA

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:TAIR;Acc:AT4G33810]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.