CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, nucleus, cytosol

Predictor Summary:

nucleus 2
plastid 1
vacuole 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91114	Soybean	nucleus	16.43	80.95
KRH35663	Soybean	plasma membrane, vacuole	86.72	61.79
KRG91113	Soybean	endoplasmic reticulum, plasma membrane, vacuole	82.85	59.14
KRG91115	Soybean	cytoskeleton, cytosol, plastid	14.98	34.64
KRH29254	Soybean	cytosol	46.86	34.28
KRH29253	Soybean	extracellular, vacuole	45.41	33.22
CDY49599	Canola	extracellular, vacuole	28.02	32.77
CDX71170	Canola	cytosol, plastid, vacuole	34.3	31.28
CDX72432	Canola	cytosol	11.35	30.32
AT4G33820.1	Thale cress	extracellular, vacuole	40.58	29.47
CDY49377	Canola	extracellular, vacuole	40.1	29.12
Bra017610.1-P	Field mustard	extracellular, vacuole	31.88	28.82
Bra036392.1-P	Field mustard	cytosol	36.47	28.82
AT2G14690.1	Thale cress	vacuole	39.61	28.77
CDX72430	Canola	extracellular, vacuole	39.37	28.75
AT4G33810.3	Thale cress	extracellular, vacuole	39.37	28.65
KRH60710	Soybean	extracellular	35.02	26.03
KRH51408	Soybean	extracellular	34.3	25.77
KRH52165	Soybean	cytosol, nucleus	29.23	16.31
KRH61477	Soybean	cytosol	28.74	16.06
CDY49598	Canola	cytosol	6.52	14.29
KRH15483	Soybean	mitochondrion	28.26	12.58
KRH05535	Soybean	mitochondrion	28.26	12.57

Protein Annotations

Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:35.1	UniProt:A0A0R0HZ77	EMBL:ACUP02006696	InterPro:GH10
EnsemblPlantsGene:GLYMA_10G256900	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	InterPro:Galactose-bd-like_sf
InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	InterPro:IPR008979	EnsemblPlants:KRH35662	ProteinID:KRH35662	ProteinID:KRH35662.1
PFAM:PF00331	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF18	MetaCyc:PWY-6784	SMART:SM00633
SUPFAM:SSF49785	SUPFAM:SSF51445	UniParc:UPI0006EDB480	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:-:48347730..48350622

Molecular Weight (calculated)

46285.6 Da

IEP (calculated)

6.508

GRAVY (calculated)

-0.436

Length

414 amino acids

Sequence
(BLAST)

001: MCAGLGVHSL SYDCSANTKT NRQTYLCCHC LENKQCLAEP ERAQYGGGII VNPGFDHNIE GWTVFGKGAI KEPMSKEGNR FIVANNRTQP LDSFSQKVSE
101: GSDTVSVMFK TNGSEMVRGG QVIAKHGCWT LLKGGIVATF SSPVEILFKS KNSTVEIWAD NISLQPFSKK QWRSLQDASI ERLNFPFGCG TNHHILTNKD
201: CQSWFVDSNT TQREGFKFTT FTNEMKWYST EKKQGEENYT IADAMLKFTK ENDISVRGHN IFWDNPKLQP EWKLGEAAAE RMKSVVSRYK GELIAWDVMN
301: ENLHFHFYED KFGENASAAA YATAYELDQE PKLLLNEFNT IEYSGDEASS PAKYIKKLQE ILSFPGVSEM SAAIGLQGHF ASGQPNLAYM RSGLDLLATT
401: GLPIWFTSKC GSTT

Best Arabidopsis Sequence Match ( AT4G33810.4 )
(BLAST)

001: MKNINNGFFL CMLLLLWCFV HSGISIDPFS PSDSLKTECV MKPPRSSETK GLLQFSRSVE DDSDEEWKID GSGSIREMTQ RIQLHEGNIY SFSAWVKLRE
101: GNNKKVGVVF RTENGRFVHG GEVRAKKRCW TLLKGGIVPD VSGSVDIFFE SDDKEAKISA SDVSLKQFSK QEWKLKQDQL IEKIRKSKVR FEVTYQNKTA
201: VKGAVISIEQ TKPSFLLGCA MNFRILQSEG YRNWFASRFK ITSFTNEMKW YTTEKERGHE NYTAADSMLK FAEENGILVR GHTVLWDDPL MQPTWVPKIE
301: DPNDLMNVTL NRINSVMTRY KGKLTGWDVV NENVHWDYFE KMLGANASSS FYNLAFKLDP DVTMFVNEYN TIENRVEVTA TPVKVKEKME EILAYPGNMN
401: IKGAIGAQGH FRPTQPNLAY MRSALDTLGS LGLPIWLTEV DMPKCPNQEV YIEEILREAY SHPAVKGIII FAGPEVSGFD KLTLADKYFN NTATGDVIDK
501: LLKEWQQSSE IPKIFMTDSE NDEEEVSLLH GHYNVNVSHP WMKNMSTSFS LEVTKEMGQR QVVRVVINA

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:TAIR;Acc:AT4G33810]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.