CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35663	Soybean	plasma membrane, vacuole	93.45	93.29
KRG91115	Soybean	cytoskeleton, cytosol, plastid	27.24	88.27
KRH35662	Soybean	cytosol, nucleus, vacuole	59.14	82.85
KRG91114	Soybean	nucleus	11.21	77.38
CDX72432	Canola	cytosol	13.62	50.97
CDX71170	Canola	cytosol, plastid, vacuole	37.24	47.58
KRH29254	Soybean	cytosol	46.38	47.53
Bra017610.1-P	Field mustard	extracellular, vacuole	36.9	46.72
AT2G14690.1	Thale cress	vacuole	44.83	45.61
CDX72430	Canola	extracellular, vacuole	44.14	45.15
CDY49377	Canola	extracellular, vacuole	44.14	44.91
KRH29253	Soybean	extracellular, vacuole	43.79	44.88
Bra036392.1-P	Field mustard	cytosol	40.34	44.66
AT4G33810.3	Thale cress	extracellular, vacuole	43.62	44.46
AT4G33820.1	Thale cress	extracellular, vacuole	43.45	44.21
CDY49598	Canola	cytosol	14.31	43.92
CDY49599	Canola	extracellular, vacuole	26.72	43.79
KRH51408	Soybean	extracellular	36.03	37.93
KRH60710	Soybean	extracellular	35.69	37.16
KRH61477	Soybean	cytosol	28.45	22.27
KRH52165	Soybean	cytosol, nucleus	28.45	22.24
KRH15483	Soybean	mitochondrion	28.97	18.06
KRH05535	Soybean	mitochondrion	28.62	17.83

Protein Annotations

EntrezGene:100777980	Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:35.1	EMBL:ACUP02012662	InterPro:CenC_carb-bd
InterPro:GH10	EnsemblPlantsGene:GLYMA_20G134200	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798	InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF
UniProt:I1NG31	InterPro:IPR001000	InterPro:IPR008979	EnsemblPlants:KRG91113	ProteinID:KRG91113	ProteinID:KRG91113.1
PFAM:PF00331	PFAM:PF02018	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF18	MetaCyc:PWY-6784
SMART:SM00633	SUPFAM:SSF49785	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000233DCF6
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:37403716..37408014

Molecular Weight (calculated)

64714.0 Da

IEP (calculated)

7.028

GRAVY (calculated)

-0.273

Length

580 amino acids

Sequence
(BLAST)

001: MKVAAEGCNL LLFITSYLLL ISGLGVHSLS YDHSATTKCL AEPRRAQYGG GIIVNPGFDH NIEGWTAFGN GAIKEVMSNG GNRFIVAHNR TQPLDSFSQK
101: VQLKKGMLYT FSAWLQVSEG SDTVSVMFKT KRNEMVRGGQ VIAKHGCWTL LKGGIAANFS SPVEILFESK NSAEEIWADN ISLQPFTKKQ WRSLQDASIE
201: RVRKRRVRFQ ITHVNETALK GAKVITRPIK LNFPFGCGMN HYILTNEDYQ SWFVSRFKFT TFTNEMKWYS TEKKQGEENY TIADAMLKFT QENGISVRGH
301: NIFWDDPKYQ PDWVRTLSPA DLTKAAAKRM KSVLSRYKGE LIAWDVMNEN LHFHFYEDKF GENASAVAYA TAYELDPEPK LFLNEFNTIE YSGDEASNPA
401: KYIKKLKEIL SFPGVSGMSA AIGLQGHFAS GQPNLAYMRS GLDLLATTGL PIWLTEASVD PQPSQAEYLE EVLREAYSHP AVEGIIMFSG PAQAGFNATT
501: LADETFKNTA AGDVVDKLIQ EWGTGPNIAT ADSRGIVDIS LHHGDYDVTV THPLIHSPIT LNLSVKKDFS LETIHVKMHA

Best Arabidopsis Sequence Match ( AT4G33840.1 )
(BLAST)

001: MKLLLLLLAF CCLSLSRCEE QSVPYDYSAT IECLENPYKP QYNGGIIVNP DLQNGSQGWS QFGNAKVDFR EFGGNKFVVA TQRNQSSDSI SQKVYLEKGI
101: LYTFSAWLQV SIGKSPVSAV FKKNGEYKHA GSVVAESKCW SMLKGGLTVD ESGPAELFFE SENTMVEIWV DSVSLQPFTQ EEWNSHHEQS IGKVRKGTVR
201: IRVMNNKGET IPNATISIEQ KKLGYPFGCA VENNILGNQA YQNWFTQRFT VTTFGNEMKW YSTERIRGQE DYSTADAMLS FFKSHGIAVR GHNVLWDDPK
301: YQPGWVNSLS GNDLYNAVKR RVYSVVSRYK GQLLGWDVVN ENLHFSFFES KFGPKASYNT YTMAHAVDPR TPMFMNEYNT LEQPKDLTSS PARYLGKLRE
401: LQSIRVAGKI PLAIGLESHF STPNIPYMRS ALDTFGATGL PIWLTEIDVD APPNVRANYF EQVLREGHAH PKVNGMVMWT GYSPSGCYRM CLTDGNFKNL
501: PTGDVVDKLL REWGGLRSQT TGVTDANGLF EAPLFHGDYD LRISHPLTNS KASYNFTLTS DDDSSQKQPS LYVFRV

Arabidopsis Description

At4g33840/F17I5_30 [Source:UniProtKB/TrEMBL;Acc:Q6NQI6]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.