CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49377	Canola	extracellular, vacuole	93.65	93.16
CDX72432	Canola	cytosol	23.81	87.1
AT4G33810.3	Thale cress	extracellular, vacuole	82.54	82.25
AT4G33820.1	Thale cress	extracellular, vacuole	81.66	81.23
CDX71170	Canola	cytosol, plastid, vacuole	51.5	64.32
CDY49598	Canola	cytosol	21.34	64.02
CDY49599	Canola	extracellular, vacuole	35.63	57.06
KRG91114	Soybean	nucleus	8.11	54.76
KRG91115	Soybean	cytoskeleton, cytosol, plastid	14.11	44.69
KRG91113	Soybean	endoplasmic reticulum, plasma membrane, vacuole	45.15	44.14
KRH35663	Soybean	plasma membrane, vacuole	45.15	44.06
KRH35662	Soybean	cytosol, nucleus, vacuole	28.75	39.37
CDY69164	Canola	vacuole	37.74	37.35
CDY28324	Canola	endoplasmic reticulum, extracellular, vacuole	37.21	36.82
CDY28323	Canola	vacuole	35.8	36.45
CDY48434	Canola	vacuole	35.8	35.43
CDY48433	Canola	vacuole	35.98	35.23
CDY28325	Canola	vacuole	35.8	35.06
CDY49378	Canola	plasma membrane, vacuole	34.39	34.09
CDX90288	Canola	endoplasmic reticulum, extracellular	31.39	31.56
CDY12095	Canola	vacuole	25.04	29.16
CDX72434	Canola	cytosol, vacuole	36.51	23.6
CDY29140	Canola	cytosol	25.57	17.0
CDY53797	Canola	cytosol	25.22	15.53
CDY48844	Canola	cytosol	25.04	15.42
CDX75175	Canola	cytosol	25.93	15.41
CDY22606	Canola	endoplasmic reticulum, vacuole	25.93	10.1
CDY53833	Canola	endoplasmic reticulum, extracellular	25.75	10.04

Protein Annotations

Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:35.1	GO:A0A078C6G3	EnsemblPlants:CDX72430	ProteinID:CDX72430
ProteinID:CDX72430.1	InterPro:GH10	InterPro:GH10_AS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00099931001	InterPro:Galactose-bd-like_sf
InterPro:Glycoside_hydrolase_SF	InterPro:IPR001000	InterPro:IPR008979	PFAM:PF00331	ScanProsite:PS00591	PFscan:PS51760
PANTHER:PTHR31490	PANTHER:PTHR31490:SF18	MetaCyc:PWY-6784	SMART:SM00633	SUPFAM:SSF51445	SignalP:SignalP-noTM
TMHMM:TMhelix	UniPathway:UPA00114	UniParc:UPI0004EE3460	SEG:seg	:	:

Description

BnaC07g44520D

Coordinates

chrLK031796:-:1181168..1183509

Molecular Weight (calculated)

64562.3 Da

IEP (calculated)

6.683

GRAVY (calculated)

-0.400

Length

567 amino acids

Sequence
(BLAST)

001: MKNINNGFFP CMLFLLMCLV YSGIAIDPFS RSHSLKTECI MKPPRSIAEQ ELTLLSRSDE DDSDQEWENG AIREMAQRIQ LQQGIIYSFS AWVKLRGGND
101: KKVGVVFRSE NGRLVHGGEV RAKQGCWSLL KGGIVPNVSG PVDIFFESED REAKISAKNL SLKQFSKKVW KLKQDQLIEK IRKNKVRFEV SYKNNTAVKE
201: AVISLKQTKP SFLLGCAMNF RILQSEGYRK WFASRFAITS FTNEMKWYTT EEVRGQENYT AADSMLKFAE ENGILVRGHT VLWDDPKMQP SWVKNIKDPD
301: DVMNVTLNRI NSVMKRYKGK LTGWDVVNEN LHWDYFEKML GVNASSRFYN IAYKLDPDVT LFVNEYNTIE NPGEVTATPV KVKDKMEEIL AYQGNENIKG
401: AIGAQGHFSP TQPNLAYMRS ALDTLGSLGL PIWITELDMP KCPNQAKYME EILREAYSHP AVEGIIIFAG PEVSGFDKLT FADKDFNNTE TGDVIDKLLK
501: EWHQKTSDIP NIFTVDHENE EEDVSLLHGL YNVNVSHPQI KNLSTSLCLE VTKEMGQRQV VRVVINA

Best Arabidopsis Sequence Match ( AT4G33810.4 )
(BLAST)

001: MKNINNGFFL CMLLLLWCFV HSGISIDPFS PSDSLKTECV MKPPRSSETK GLLQFSRSVE DDSDEEWKID GSGSIREMTQ RIQLHEGNIY SFSAWVKLRE
101: GNNKKVGVVF RTENGRFVHG GEVRAKKRCW TLLKGGIVPD VSGSVDIFFE SDDKEAKISA SDVSLKQFSK QEWKLKQDQL IEKIRKSKVR FEVTYQNKTA
201: VKGAVISIEQ TKPSFLLGCA MNFRILQSEG YRNWFASRFK ITSFTNEMKW YTTEKERGHE NYTAADSMLK FAEENGILVR GHTVLWDDPL MQPTWVPKIE
301: DPNDLMNVTL NRINSVMTRY KGKLTGWDVV NENVHWDYFE KMLGANASSS FYNLAFKLDP DVTMFVNEYN TIENRVEVTA TPVKVKEKME EILAYPGNMN
401: IKGAIGAQGH FRPTQPNLAY MRSALDTLGS LGLPIWLTEV DMPKCPNQEV YIEEILREAY SHPAVKGIII FAGPEVSGFD KLTLADKYFN NTATGDVIDK
501: LLKEWQQSSE IPKIFMTDSE NDEEEVSLLH GHYNVNVSHP WMKNMSTSFS LEVTKEMGQR QVVRVVINA

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:TAIR;Acc:AT4G33810]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.