Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G33840.1 | CDY03088 | AT2G01950.1 | 19000166 |
| AT4G33840.1 | CDY17621 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48434 | Canola | vacuole | 96.95 | 94.24 |
| CDY69164 | Canola | vacuole | 87.79 | 85.34 |
| CDY28324 | Canola | endoplasmic reticulum, extracellular, vacuole | 86.71 | 84.29 |
| AT4G33840.1 | Thale cress | vacuole | 79.71 | 77.08 |
| AT4G33830.1 | Thale cress | vacuole | 78.1 | 75.52 |
| CDY49378 | Canola | plasma membrane, vacuole | 76.48 | 74.48 |
| CDY48433 | Canola | vacuole | 73.79 | 70.98 |
| CDY28325 | Canola | vacuole | 73.25 | 70.47 |
| KRH29254 | Soybean | cytosol | 56.55 | 55.65 |
| VIT_03s0091g00890.t01 | Wine grape | extracellular, vacuole | 53.86 | 54.45 |
| VIT_03s0091g00900.t01 | Wine grape | cytosol | 54.22 | 54.22 |
| VIT_03s0091g00880.t01 | Wine grape | vacuole | 57.09 | 53.45 |
| CDX72434 | Canola | cytosol, vacuole | 79.89 | 50.74 |
| KRH29253 | Soybean | extracellular, vacuole | 50.81 | 50.0 |
| VIT_03s0091g00950.t01 | Wine grape | cytosol | 49.55 | 50.0 |
| Zm00001d028103_P001 | Maize | extracellular, vacuole | 51.35 | 49.31 |
| Os03t0201901-00 | Rice | cytosol | 49.73 | 48.6 |
| EER92683 | Sorghum | vacuole | 50.81 | 48.46 |
| GSMUA_Achr1P12500_001 | Banana | extracellular, vacuole | 49.37 | 48.33 |
| TraesCS4D01G259500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 49.37 | 48.25 |
| TraesCS4B01G259100.1 | Wheat | vacuole | 49.19 | 48.07 |
| TraesCS4D01G259100.1 | Wheat | vacuole | 50.27 | 48.03 |
| KXG39936 | Sorghum | extracellular, vacuole | 49.73 | 48.01 |
| TraesCS4A01G045500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 49.19 | 47.74 |
| Os03t0201500-01 | Rice | vacuole | 49.19 | 47.74 |
| TraesCS4B01G259400.1 | Wheat | vacuole | 49.91 | 47.68 |
| Zm00001d048151_P001 | Maize | vacuole | 49.73 | 47.68 |
| TraesCS4A01G045800.1 | Wheat | vacuole | 49.55 | 47.34 |
| Solyc01g106990.1.1 | Tomato | vacuole | 48.83 | 47.14 |
| Os10t0351700-01 | Rice | plasma membrane | 47.76 | 45.78 |
| HORVU4Hr1G070260.12 | Barley | vacuole | 50.09 | 45.66 |
| TraesCS5D01G194800.1 | Wheat | plasma membrane, vacuole | 47.22 | 44.8 |
| HORVU5Hr1G056740.1 | Barley | vacuole | 47.58 | 44.76 |
| HORVU1Hr1G023120.1 | Barley | extracellular | 46.14 | 44.7 |
| TraesCS5A01G196600.1 | Wheat | plasma membrane, vacuole | 47.04 | 44.63 |
| TraesCS5A01G196500.1 | Wheat | plasma membrane, vacuole | 47.04 | 44.63 |
| TraesCS1B01G124500.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 45.96 | 44.6 |
| TraesCS1A01G107100.1 | Wheat | extracellular, vacuole | 45.6 | 44.25 |
| TraesCS1D01G107700.1 | Wheat | extracellular, vacuole | 45.42 | 44.08 |
| KXG34533 | Sorghum | endoplasmic reticulum, plasma membrane, vacuole | 47.4 | 43.85 |
| HORVU2Hr1G113150.1 | Barley | cytosol | 42.01 | 43.66 |
| Zm00001d030468_P001 | Maize | cytosol | 46.14 | 43.63 |
| HORVU2Hr1G122890.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 45.6 | 43.49 |
| TraesCSU01G021800.1 | Wheat | extracellular, vacuole | 45.42 | 43.25 |
| Solyc01g107000.1.1 | Tomato | endoplasmic reticulum | 44.34 | 42.22 |
| TraesCS2B01G537100.1 | Wheat | vacuole | 43.45 | 42.16 |
| Zm00001d048152_P001 | Maize | cytosol, extracellular, vacuole | 49.73 | 42.1 |
| PGSC0003DMT400037865 | Potato | cytosol | 42.73 | 41.9 |
| TraesCS2D01G510500.1 | Wheat | vacuole | 42.91 | 41.64 |
| Solyc05g051260.2.1 | Tomato | golgi, vacuole | 43.09 | 41.59 |
| TraesCS2A01G584800.1 | Wheat | plastid, vacuole | 45.42 | 41.54 |
| EER92684 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 42.55 | 41.43 |
| CDX72432 | Canola | cytosol | 11.13 | 40.0 |
| CDX71170 | Canola | cytosol, plastid, vacuole | 32.14 | 39.43 |
| Os10t0351600-00 | Rice | cytosol | 40.04 | 37.99 |
| Os03t0201800-01 | Rice | extracellular | 39.5 | 37.8 |
| CDX90288 | Canola | endoplasmic reticulum, extracellular | 37.52 | 37.06 |
| CDY49598 | Canola | cytosol | 12.21 | 35.98 |
| CDX72430 | Canola | extracellular, vacuole | 36.45 | 35.8 |
| CDY49377 | Canola | extracellular, vacuole | 36.62 | 35.79 |
| CDY12095 | Canola | vacuole | 30.7 | 35.11 |
| CDY49599 | Canola | extracellular, vacuole | 21.54 | 33.9 |
| GSMUA_Achr1P12520_001 | Banana | mitochondrion | 47.76 | 29.04 |
| GSMUA_Achr1P12510_001 | Banana | cytosol | 45.06 | 26.2 |
| Solyc01g106980.1.1 | Tomato | cytosol | 46.5 | 23.46 |
| CDY48844 | Canola | cytosol | 27.47 | 16.61 |
| CDY29140 | Canola | cytosol | 25.31 | 16.53 |
| CDY53797 | Canola | cytosol | 27.11 | 16.4 |
| CDX75175 | Canola | cytosol | 25.49 | 14.88 |
| CDY53833 | Canola | endoplasmic reticulum, extracellular | 26.93 | 10.32 |
| CDY22606 | Canola | endoplasmic reticulum, vacuole | 26.93 | 10.3 |
Protein Annotations
| Gene3D:2.60.120.260 | Gene3D:3.20.20.80 | MapMan:35.1 | GO:A0A078GUK2 | UniProt:A0A078GUK2 | EnsemblPlants:CDY28323 |
| ProteinID:CDY28323 | ProteinID:CDY28323.1 | InterPro:GH10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00040082001 | InterPro:Galactose-bd-like_sf |
| InterPro:Glycoside_hydrolase_SF | InterPro:IPR001000 | InterPro:IPR008979 | PFAM:PF00331 | PFscan:PS51760 | PANTHER:PTHR31490 |
| PANTHER:PTHR31490:SF2 | MetaCyc:PWY-6784 | SMART:SM00633 | SUPFAM:SSF49785 | SUPFAM:SSF51445 | SignalP:SignalP-noTM |
| UniPathway:UPA00114 | UniParc:UPI0004EDF9FD | SEG:seg | : | : | : |
Description
BnaC03g66360DBnaC03g66360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GUK2]
Coordinates
chrLK032217:-:371974..375014
Molecular Weight (calculated)
62138.5 Da
IEP (calculated)
7.054
GRAVY (calculated)
-0.342
Length
557 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLLLLLLAF CCLSLSRCEE KNVPYDYSAT IECLENPNKP QYNGGIIVNP DLQNEFGGNK FVIARGRNQS YDSVSQKVYL EKGLLYTFSA WLQVSQGNSP
101: VRAVFKKNGE YKHAGSVIAE SKCWSMLKGG LTVDESGPAD LYFESEDTTA EIWVDSVSLQ PFTQKEWNSH HKQSINITRK GAVRIRAVNS AGEPVPNATI
201: SIVQNRLGFP FGCSAGSNIL GNQAFQDWFT KRFTVTAFEN EMKWYSTEVV RGKEDYSTAD AMVRLFKQHG IAIRGHHIIL DDPKYQLSWV TALNGPDLYK
301: AVKRRVDSVV SRYKGQLASW DVVNENLHFS FFENKMGPKA SYNVFEQAHA VDPTTTMFMN EFNTLEQPGD GVSSPAKYLQ KLRELQSIRA PGNIPLGIGL
401: ESHFFSTPNI PYMRSALDTL GATGLPIWLT EVDVAAPPNV QANYFEQVLR EGHAHPKVTG MVTWSGYNPK GCFRMCLTDG NFRNLPTGDV VDKLLREWGG
501: LRGKTTGLTD ADGYFEASLF HGDYDLSIAH PLTNSTASHS FKLTSDDYHP SPTVVRV
101: VRAVFKKNGE YKHAGSVIAE SKCWSMLKGG LTVDESGPAD LYFESEDTTA EIWVDSVSLQ PFTQKEWNSH HKQSINITRK GAVRIRAVNS AGEPVPNATI
201: SIVQNRLGFP FGCSAGSNIL GNQAFQDWFT KRFTVTAFEN EMKWYSTEVV RGKEDYSTAD AMVRLFKQHG IAIRGHHIIL DDPKYQLSWV TALNGPDLYK
301: AVKRRVDSVV SRYKGQLASW DVVNENLHFS FFENKMGPKA SYNVFEQAHA VDPTTTMFMN EFNTLEQPGD GVSSPAKYLQ KLRELQSIRA PGNIPLGIGL
401: ESHFFSTPNI PYMRSALDTL GATGLPIWLT EVDVAAPPNV QANYFEQVLR EGHAHPKVTG MVTWSGYNPK GCFRMCLTDG NFRNLPTGDV VDKLLREWGG
501: LRGKTTGLTD ADGYFEASLF HGDYDLSIAH PLTNSTASHS FKLTSDDYHP SPTVVRV
001: MKLLLLLLAF CCLSLSRCEE QSVPYDYSAT IECLENPYKP QYNGGIIVNP DLQNGSQGWS QFGNAKVDFR EFGGNKFVVA TQRNQSSDSI SQKVYLEKGI
101: LYTFSAWLQV SIGKSPVSAV FKKNGEYKHA GSVVAESKCW SMLKGGLTVD ESGPAELFFE SENTMVEIWV DSVSLQPFTQ EEWNSHHEQS IGKVRKGTVR
201: IRVMNNKGET IPNATISIEQ KKLGYPFGCA VENNILGNQA YQNWFTQRFT VTTFGNEMKW YSTERIRGQE DYSTADAMLS FFKSHGIAVR GHNVLWDDPK
301: YQPGWVNSLS GNDLYNAVKR RVYSVVSRYK GQLLGWDVVN ENLHFSFFES KFGPKASYNT YTMAHAVDPR TPMFMNEYNT LEQPKDLTSS PARYLGKLRE
401: LQSIRVAGKI PLAIGLESHF STPNIPYMRS ALDTFGATGL PIWLTEIDVD APPNVRANYF EQVLREGHAH PKVNGMVMWT GYSPSGCYRM CLTDGNFKNL
501: PTGDVVDKLL REWGGLRSQT TGVTDANGLF EAPLFHGDYD LRISHPLTNS KASYNFTLTS DDDSSQKQPS LYVFRV
101: LYTFSAWLQV SIGKSPVSAV FKKNGEYKHA GSVVAESKCW SMLKGGLTVD ESGPAELFFE SENTMVEIWV DSVSLQPFTQ EEWNSHHEQS IGKVRKGTVR
201: IRVMNNKGET IPNATISIEQ KKLGYPFGCA VENNILGNQA YQNWFTQRFT VTTFGNEMKW YSTERIRGQE DYSTADAMLS FFKSHGIAVR GHNVLWDDPK
301: YQPGWVNSLS GNDLYNAVKR RVYSVVSRYK GQLLGWDVVN ENLHFSFFES KFGPKASYNT YTMAHAVDPR TPMFMNEYNT LEQPKDLTSS PARYLGKLRE
401: LQSIRVAGKI PLAIGLESHF STPNIPYMRS ALDTFGATGL PIWLTEIDVD APPNVRANYF EQVLREGHAH PKVNGMVMWT GYSPSGCYRM CLTDGNFKNL
501: PTGDVVDKLL REWGGLRSQT TGVTDANGLF EAPLFHGDYD LRISHPLTNS KASYNFTLTS DDDSSQKQPS LYVFRV
Arabidopsis Description
At4g33840/F17I5_30 [Source:UniProtKB/TrEMBL;Acc:Q6NQI6]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.