Factsheet for HORVU4Hr1G070260.12

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 6
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G018030.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33840.1	HORVU3Hr1G018030.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G259100.1	Wheat	vacuole	88.54	92.8
TraesCS4B01G259400.1	Wheat	vacuole	88.54	92.8
TraesCS4A01G045800.1	Wheat	vacuole	87.4	91.6
Os03t0201901-00	Rice	cytosol	71.52	76.67
Zm00001d028103_P001	Maize	extracellular, vacuole	70.21	73.97
EER92683	Sorghum	vacuole	70.54	73.8
Zm00001d048151_P001	Maize	vacuole	67.43	70.91
GSMUA_Achr1P12500_001	Banana	extracellular, vacuole	49.1	52.72
HORVU1Hr1G023120.1	Barley	extracellular	49.1	52.17
HORVU2Hr1G122890.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	49.59	51.88
VIT_03s0091g00950.t01	Wine grape	cytosol	46.81	51.81
KRH29254	Soybean	cytosol	47.46	51.24
VIT_03s0091g00900.t01	Wine grape	cytosol	46.15	50.63
HORVU2Hr1G113150.1	Barley	cytosol	44.03	50.19
CDY28323	Canola	vacuole	45.66	50.09
CDY69164	Canola	vacuole	46.81	49.91
HORVU5Hr1G056740.1	Barley	vacuole	48.28	49.83
AT4G33840.1	Thale cress	vacuole	46.97	49.83
AT4G33830.1	Thale cress	vacuole	46.97	49.83
CDY48434	Canola	vacuole	46.64	49.74
CDY28324	Canola	endoplasmic reticulum, extracellular, vacuole	46.32	49.39
AT4G33860.1	Thale cress	plasma membrane, vacuole	46.48	49.31
Bra034584.1-P	Field mustard	vacuole	46.15	49.21
Bra034585.1-P	Field mustard	vacuole	46.15	49.21
VIT_03s0091g00880.t01	Wine grape	vacuole	47.3	48.57
VIT_03s0091g00890.t01	Wine grape	extracellular, vacuole	43.54	48.28
Bra034586.1-P	Field mustard	endoplasmic reticulum, vacuole	44.68	47.56
CDY49378	Canola	plasma membrane, vacuole	44.52	47.55
CDY48433	Canola	vacuole	44.84	47.32
CDY28325	Canola	vacuole	44.68	47.15
KRH29253	Soybean	extracellular, vacuole	42.55	45.94
Solyc01g106990.1.1	Tomato	vacuole	39.93	42.29
Solyc01g107000.1.1	Tomato	endoplasmic reticulum	40.43	42.22
Bra017609.1-P	Field mustard	nucleus	45.5	41.68
PGSC0003DMT400037865	Potato	cytosol	38.46	41.37
Solyc05g051260.2.1	Tomato	golgi, vacuole	37.97	40.21
HORVU2Hr1G011550.11	Barley	plasma membrane, plastid, vacuole	35.35	35.76
HORVU4Hr1G063790.23	Barley	vacuole	30.28	32.57
CDX72434	Canola	cytosol, vacuole	46.48	32.38
GSMUA_Achr1P12520_001	Banana	mitochondrion	45.17	30.13
HORVU5Hr1G106250.2	Barley	cytosol, mitochondrion, vacuole	24.22	28.46
HORVU5Hr1G106280.1	Barley	cytosol, extracellular, vacuole	25.2	28.1
HORVU5Hr1G106270.1	Barley	extracellular, vacuole	25.53	27.71
GSMUA_Achr1P12510_001	Banana	cytosol	43.21	27.56
HORVU5Hr1G106210.1	Barley	cytosol, extracellular	25.37	27.34
HORVU3Hr1G007460.1	Barley	cytosol	26.35	23.89
Solyc01g106980.1.1	Tomato	cytosol	40.1	22.19
HORVU3Hr1G007470.1	Barley	extracellular, plastid, vacuole	25.04	21.95
HORVU4Hr1G003220.3	Barley	cytosol	25.7	21.27
HORVU5Hr1G106260.1	Barley	cytosol	11.29	19.11
HORVU2Hr1G021350.12	Barley	mitochondrion	27.33	15.14

Protein Annotations

Gene3D:2.60.120.260	Gene3D:3.20.20.80	MapMan:35.1	UniProt:A0A287PKG1	InterPro:GH10	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Galactose-bd-like_sf	InterPro:Glycoside_hydrolase_SF	EnsemblPlantsGene:HORVU4Hr1G070260	EnsemblPlants:HORVU4Hr1G070260.12	InterPro:IPR001000	InterPro:IPR008979
PFAM:PF00331	PFscan:PS51760	PANTHER:PTHR31490	PANTHER:PTHR31490:SF13	SMART:SM00633	SUPFAM:SSF49785
SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000B46FD56	SEG:seg	:

Description

No Description!

Coordinates

chrchr4H:-:574829375..574833583

Molecular Weight (calculated)

66788.5 Da

IEP (calculated)

6.508

GRAVY (calculated)

-0.184

Length

611 amino acids

Sequence
(BLAST)

001: MRATMGRSTS PSVLFLLWAA AAQLLLINAA LMVQSVPYDY SSSSECLAEP LEAHYGGGVI VNSDFSAGLQ GWSAFGYGSV TEGSSPTGNR YAVAANRTRP
101: YQSVSQKVFL QNDTHYTLSG LNLIATIYLA SEFVGTVAHK GLVVAAWLQV SDRSADVIAV VKTADNFIHA GGVDAKSGCW SILKGGLTAA VSGPAELYFE
201: SNTTADMWVD NVSLQPFSKE EWSSHRHAAV KQARKRTVRL RARDAAGNPV PGARVHIRQV RSGFPLGSAM SHEIINNEKY QQWFAKRFTV TTFENEMKWY
301: STEWTQGHED YSVPDAMLRF ARAHGIAVRG HNVFWDDPST QLGWVKALSC DQLRAATAHR MKSVMSRYAG KVIAWDVVNE NLHFDYFEDK FGAGASAAFY
401: QKAHGMDGGA LMSMNDFNTL EQPADQSGLP SKYLSKLSQI KDAFPGNGVG VRMAIGLEGH FGATPNIPYV RAALDTLSQA GVPIWLTEID VKPGPDQAHH
501: LEQVLREVYS HPAVHGIVLW TAWHPQGCYV MCLTDDNFNN LPVGDTVDKL IAEWKTSSHV GVADADGHYD AELFHGDYNV TVTHPAAAAN STVVQSLSVH
601: RESDDEYTIH V

Best Arabidopsis Sequence Match ( AT4G33810.1 )
(BLAST)

001: MKPPRSSETK GLLQFSRSVE DDSDEEWKID GSGSIREMTQ RIQLHEGNIY SFSAWVKLRE GNNKKVGVVF RTENGRFVHG GEVRAKKRCW TLLKGGIVPD
101: VSGSVDIFFE SDDKEAKISA SDVSLKQFSK QEWKLKQDQL IEKIRKSKVR FEVTYQNKTA VKGAVISIEQ TKPSFLLGCA MNFRILQSEG YRNWFASRFK
201: ITSFTNEMKW YTTEKERGHE NYTAADSMLK FAEENGILVR GHTVLWDDPL MQPTWVPKIE DPNDLMNVTL NRINSVMTRY KGKLTGWDVV NENVHWDYFE
301: KMLGANASSS FYNLAFKLDP DVTMFVNEYN TIENRVEVTA TPVKVKEKME EILAYPGNMN IKGAIGAQGH FRPTQPNLAY MRSALDTLGS LGLPIWLTEV
401: DMPKCPNQEV YIEEILREAY SHPAVKGIII FAGPEVSGFD KLTLADKYFN NTATGDVIDK LLKEWQQSSE IPKIFMTDSE NDEEEVSLLH GHYNVNVSHP
501: WMKNMSTSFS LEVTKEMGQR QVVRVVINA

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:TAIR;Acc:AT4G33810]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.